FFCP PHASE1:Mm9::chr2:25538272..25538292,+: Difference between revisions
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|id=chr2:25538272..25538292,+
|short_description=p1@Lcn10
|description=CAGE_peak_1_at_Lcn10_5end
|association_with_transcript=26bp_to_ENSMUST00000058912,NM_178036,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=332578 | |EntrezGene=332578 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=Q810Z1,Q0VBF7 | |UniProt=Q810Z1,Q0VBF7 | ||
|association_with_transcript=26bp_to_ENSMUST00000058912,NM_178036,uc008ite.1_5end | |||
|cluster_id=chr2:25538272..25538292,+ | |||
|description=CAGE_peak_1_at_Lcn10_5end | |||
|id=chr2:25538272..25538292,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!3.98e-12!3;UBERON:0006555!3.98e-12!3;UBERON:0005103!3.98e-12!3;UBERON:0000083!3.98e-12!3;UBERON:0009201!3.98e-12!3;UBERON:0004819!3.98e-12!3;UBERON:0006553!3.98e-12!3;UBERON:0003074!3.98e-12!3;UBERON:0003060!3.98e-12!3;UBERON:0000080!2.53e-09!4;UBERON:0005904!2.53e-09!4;UBERON:0006947!2.53e-09!4;UBERON:0002120!2.53e-09!4;UBERON:0004054!2.53e-09!4;UBERON:0004875!2.53e-09!4;UBERON:0004876!2.53e-09!4;UBERON:0005721!2.53e-09!4;UBERON:0005754!2.53e-09!4;UBERON:0007297!2.53e-09!4;UBERON:0002370!1.55e-08!23;UBERON:0000974!1.55e-08!23;UBERON:0004807!1.55e-08!23;UBERON:0005058!1.55e-08!23;UBERON:0003351!1.55e-08!23;UBERON:0009113!1.55e-08!23;UBERON:0003295!1.55e-08!23;UBERON:0009722!1.55e-08!23;UBERON:0005562!1.55e-08!23;UBERON:0007690!1.55e-08!23;UBERON:0006562!3.50e-08!24;UBERON:0003408!3.50e-08!24;UBERON:0001557!3.50e-08!24;UBERON:0001042!3.50e-08!24;UBERON:0008814!3.50e-08!24;UBERON:0009145!3.50e-08!24;UBERON:0000072!2.84e-07!27;UBERON:0004177!9.04e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.74e-24,3;UBERON:0006555,1.74e-24,3;UBERON:0005103,1.74e-24,3;UBERON:0000083,1.74e-24,3;UBERON:0009201,1.74e-24,3;UBERON:0004819,1.74e-24,3;UBERON:0006553,1.74e-24,3;UBERON:0003074,1.74e-24,3;UBERON:0003060,1.74e-24,3;UBERON:0000080,1.16e-18,4;UBERON:0005904,1.16e-18,4;UBERON:0006947,1.16e-18,4;UBERON:0002120,1.16e-18,4;UBERON:0004054,1.16e-18,4;UBERON:0004875,1.16e-18,4;UBERON:0004876,1.16e-18,4;UBERON:0005721,1.16e-18,4;UBERON:0005754,1.16e-18,4;UBERON:0007297,1.16e-18,4;UBERON:0000058,3.95e-11,7;UBERON:0001343,4.13e-10,2;UBERON:0004910,4.13e-10,2;UBERON:0004909,4.13e-10,2;UBERON:0005154,4.13e-10,2;UBERON:0005295,4.13e-10,2;UBERON:0005297,4.13e-10,2;UBERON:0005294,4.13e-10,2;UBERON:0010141,4.13e-10,2;UBERON:0005891,4.13e-10,2;UBERON:0004175,7.02e-09,9;UBERON:0003887,4.34e-08,10;UBERON:0004871,3.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,5.82337786567206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,77.2567287488678,455.659133455915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0,0,0,5.82337786567206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,77.2567287488678,455.659133455915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Lcn10 | |||
}} | }} |
Latest revision as of 10:36, 26 September 2015
Short description: | p1@Lcn10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lcn10_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 26bp_to_ENSMUST00000058912, NM_178036, uc008ite.1_5end |
EntrezGene: | Lcn10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 1.74e-24 | 3 |
excretory tube | 1.74e-24 | 3 |
mesonephric epithelium | 1.74e-24 | 3 |
mesonephric tubule | 1.74e-24 | 3 |
nephric duct | 1.74e-24 | 3 |
kidney epithelium | 1.74e-24 | 3 |
renal duct | 1.74e-24 | 3 |
mesonephric duct | 1.74e-24 | 3 |
pronephric duct | 1.74e-24 | 3 |
mesonephros | 1.16e-18 | 4 |
duct of male reproductive system | 1.16e-18 | 4 |
male genital duct | 1.16e-18 | 4 |
pronephros | 1.16e-18 | 4 |
internal male genitalia | 1.16e-18 | 4 |
nephrogenic cord | 1.16e-18 | 4 |
urogenital ridge | 1.16e-18 | 4 |
pronephric mesoderm | 1.16e-18 | 4 |
rostral part of nephrogenic cord | 1.16e-18 | 4 |
presumptive pronephric mesoderm | 1.16e-18 | 4 |
duct | 3.95e-11 | 7 |
seminiferous tubule of testis | 4.13e-10 | 2 |
epithelium of male gonad | 4.13e-10 | 2 |
epithelium of gonad | 4.13e-10 | 2 |
epithelial cord | 4.13e-10 | 2 |
sex cord | 4.13e-10 | 2 |
testis sex cord | 4.13e-10 | 2 |
genital ridge | 4.13e-10 | 2 |
primitive sex cord of indifferent gonad | 4.13e-10 | 2 |
coelomic epithelium | 4.13e-10 | 2 |
internal genitalia | 7.02e-09 | 9 |
intraembryonic coelom | 4.34e-08 | 10 |
somatic layer of lateral plate mesoderm | 3.64e-07 | 3 |