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FFCP PHASE1:Mm9::chr17:47642107..47642113,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12445
|EntrezGene=12445
|HGNC=
|HGNC=
|MCL_coexpression_id=2215
|TSSclassifier=NA
|UniProt=P30282,Q3TSW4,Q3TWY0
|UniProt=P30282,Q3TSW4,Q3TWY0
|association_with_transcript=107bp_to_ENSMUST00000171031,NM_001081635,NM_001081636,uc008cvk.1,uc008cvl.1,uc008cvm.1_5end
|association_with_transcript=107bp_to_ENSMUST00000171031,NM_001081635,NM_001081636,uc008cvk.1,uc008cvl.1,uc008cvm.1_5end
|cluster_id=chr17:47642107..47642113,+
|description=CAGE_peak_12_at_Ccnd3_5end
|description=CAGE_peak_12_at_Ccnd3_5end
|id=chr17:47642107..47642113,+
|id=chr17:47642107..47642113,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,3.07e-08,9;CL:0000789,3.07e-08,9;CL:0002420,3.07e-08,9;CL:0002419,3.07e-08,9;CL:0000790,3.07e-08,9;CL:0000542,5.87e-08,13;CL:0000051,5.87e-08,13;CL:0002031,9.41e-08,25;CL:0000624,3.00e-07,8;CL:0000838,3.21e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003104!6.47e-12!131;UBERON:0009142!6.47e-12!131;UBERON:0000926!3.46e-11!193;UBERON:0004120!3.46e-11!193;UBERON:0006603!3.46e-11!193;UBERON:0001004!2.20e-09!42;UBERON:0000077!3.97e-09!97;UBERON:0000065!5.07e-09!41;UBERON:0001041!1.38e-08!92;UBERON:0001048!2.28e-08!147;UBERON:0000464!1.29e-07!57;UBERON:0005153!4.99e-07!17
|ontology_enrichment_uberon=UBERON:0003104!6.47e-12!131;UBERON:0009142!6.47e-12!131;UBERON:0000926!3.46e-11!193;UBERON:0004120!3.46e-11!193;UBERON:0006603!3.46e-11!193;UBERON:0001004!2.20e-09!42;UBERON:0000077!3.97e-09!97;UBERON:0000065!5.07e-09!41;UBERON:0001041!1.38e-08!92;UBERON:0001048!2.28e-08!147;UBERON:0000464!1.29e-07!57;UBERON:0005153!4.99e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.39e-17,42;UBERON:0000065,1.81e-16,41;UBERON:0003408,7.09e-12,24;UBERON:0005153,7.24e-12,17;UBERON:0005911,1.17e-11,69;UBERON:0002370,3.62e-11,23;UBERON:0000974,3.62e-11,23;UBERON:0004807,3.62e-11,23;UBERON:0005058,3.62e-11,23;UBERON:0003351,3.62e-11,23;UBERON:0009113,3.62e-11,23;UBERON:0003295,3.62e-11,23;UBERON:0009722,3.62e-11,23;UBERON:0005562,3.62e-11,23;UBERON:0007690,3.62e-11,23;UBERON:0006562,1.66e-10,24;UBERON:0001557,1.66e-10,24;UBERON:0001042,1.66e-10,24;UBERON:0008814,1.66e-10,24;UBERON:0009145,1.66e-10,24;UBERON:0001041,2.46e-10,80;UBERON:0000077,6.20e-10,35;UBERON:0005157,1.69e-09,20;UBERON:0002048,5.31e-09,14;UBERON:0000117,5.31e-09,14;UBERON:0000171,5.31e-09,14;UBERON:0000170,5.31e-09,14;UBERON:0005597,5.31e-09,14;UBERON:0000118,5.31e-09,14;UBERON:0004177,5.86e-09,29;UBERON:0005057,5.86e-09,29;UBERON:0000072,7.84e-09,27;UBERON:0002193,2.56e-08,48;UBERON:0002405,2.56e-08,48;UBERON:0002390,3.32e-08,45;UBERON:0003061,3.32e-08,45;UBERON:0002530,2.40e-07,65;UBERON:0005178,6.30e-07,17;UBERON:0005181,6.30e-07,17;UBERON:0002224,6.30e-07,17;UBERON:0000915,6.30e-07,17;UBERON:0008947,6.30e-07,17;UBERON:0003258,6.30e-07,17
|phase1_expression=0.640595388419176,0,0,0,0,0.671517087647559,0.233612640595526,3.61545305636414,0.422366166455,1.17032263160997,1.02730780935303,1.19658238493005,4.10881751834894,3.93391810885488,0.333109761815663,1.01237633694913,0.699561878128147,1.73504190947031,2.74228867211478,4.2438965179803,0.510259740906419,0.595745707205312,0.783599367416806,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,1.23012957516914,0,0.288851619751275,0.498703936075477,0.408338712524738,4.18531630736908,0.7813353445238,2.61761871986899,1.17646297606203,5.46436387966757,1.45653105909346,0.251793635951155,0.101376931219515,0.183546752161682,1.56478268869608,1.52617609466313,1.09843091367236,0.388859798148567,0.839918529752175,1.43752564364972,1.51004345451963,7.25362142011344,2.01656279485478,0.257259436035947,0.85960031981627,1.54701627683233,0,0,0,0,0,0.449949858640699,0,0,1.19840044207362,0.768436610643109,0,0.135005938331691,0,0,0,0,0,0,0,0,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0.505524445014783,0.91347103775248,2.84831672011889,2.3750742250372,0.346970653532272,0.304465478312141,0.691846491768175,0.301445281105245,0.352766121407114,0.502666365318702,0.494389935468748,0.144599356919912,0.884610551949874,0.161766849947409,1.54589062922275,0.969750506270444,0,0.292780797011547,1.25668024088073,0.255457055208591,0.239630249011841,0,0.381210681219194,0.898743836428936,0,0.251308704225729,0,0.255715457330331,0.62336413367868,0.486723789203273,0.712875546952214,0.995255764880744,1.0108910337347,0,0.260240885925407,0,0.180062129805349,0,0.476255494059295,0.384341160854549,0,0.258703370739016,0.431135985865684,0.378212160335639,0.351902248327898,0,0,0,0.411564272815887,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0,0.697601834251224,0.268273401399619,0.583826711835847,0.329119699826961,0,0.243206428637567,0.584799949701329,0.219550115291051,0.536825675041487,0.420579897128254,0.411618449517138,0,0.264450566663544,1.2797295032114,0.232236671860439,0.38660238396628,0.605050573870028,0.22237804384487,0.570676878337677,0,0.329397909448022,0.754005626400808,0.198956472041151,0.779856348476481,0,0.216138049874694,0.995706366271836,0.189667900953082,0.114248512609729,1.1270773567308,0.407302655690628,0.387904974335251,0.911765658574141,0.569128834118316,0.738050739898011,0.31399745568275,0.863780147452604,1.1858105083486,0,0,0.449724224769707,0.811440485554012,0,0.50925170356284,1.72617682470486,0.972811360650212,0.274561413188081,4.31304619582064,0.744281895337007,1.24815069245824,0.252578877947112,0.717589654087649,0.482443521363367,3.69506380333209,0.37898282354097,0.162964976442026,0.509235257325564,1.17345124144251,1.50755631697634,3.09456733151818,2.92700471786698,1.57635144106191,1.10732344824387,1.43509291791738,2.13022309130459,1.89953480052485,4.91806799177139,0,0,2.45882136509518,2.48343071674259,0.321101179975584,0.117211686592203,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0.716906393857656,0.445597348164788,0,0,0,1.18586333383957,0,1.27746076687442,0.178065603667255,1.14020871547503,1.64970122972535,5.30980553359851,0.485561272309963,0,0.188605079755898,0.295301892880773,0.922305443831782,1.55056975900933,0.727067458955011,1.06949213515416,0.948110273807448,1.05418608574999,1.03135543248187,0.680879211507576,0.18006109403131,0.388076051348264,0,0.709360934569094,0,1.48094118541909,0.913394847343798,0.469343416127421,0.21183207086382,1.32317038832977,0.8244312647074,0.645857706783622,0,0.119372344003136,0.328281799490123,0.874442509889552,0.370850604021019,1.19609616558497,0.412773735926445,0.370389054739423,0.376736914009382,0.820165366326151,0.686334519619568,0.849892149969277,0.979660166265606,0.552799895217695,1.90934123603023,0.790839983952838,0.406638934253697,0.108005340821801,0,0.218362563746178,0.809186078308924,0.495920734352016,0.26175594198403,0.777689839750757,1.24267862617385,0.56369293868419,0.747582730219894,0.496375471371293,0.972255941720238,0.387479470433193,0.844780627453891,1.29092962510329,0.5208175393758,0.524296722128554,0.241584120826006,0.288030006257865,2.21207784439725,0.810900861160657,0.102710957164827,0.649604114888975,1.9692936523423,1.58945083825012,2.40390899039938,2.06765338044408,2.3222283488074,2.59103142626999,2.92395936896837,3.21611006441183,3.55983814069219,3.85693777199178,0.226730383615211,0,0,0,3.09103350451505,0.93841237725591,0.73260649706906,0.428736758158132,0.501572104035363,0,0,0,0,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.576226371643824,0.574354689556133,0,0.115884325944855,0.1929092204637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|phase1_expression=0.640595388419176,0,0,0,0,0.671517087647559,0.233612640595526,3.61545305636414,0.422366166455,1.17032263160997,1.02730780935303,1.19658238493005,4.10881751834894,3.93391810885488,0.333109761815663,1.01237633694913,0.699561878128147,1.73504190947031,2.74228867211478,4.2438965179803,0.510259740906419,0.595745707205312,0.783599367416806,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,1.23012957516914,0,0.288851619751275,0.498703936075477,0.408338712524738,4.18531630736908,0.7813353445238,2.61761871986899,1.17646297606203,5.46436387966757,1.45653105909346,0.251793635951155,0.101376931219515,0.183546752161682,1.56478268869608,1.52617609466313,1.09843091367236,0.388859798148567,0.839918529752175,1.43752564364972,1.51004345451963,7.25362142011344,2.01656279485478,0.257259436035947,0.85960031981627,1.54701627683233,0,0,0,0,0,0.449949858640699,0,0,1.19840044207362,0.768436610643109,0,0.135005938331691,0,0,0,0,0,0,0,0,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0.505524445014783,0.91347103775248,2.84831672011889,2.3750742250372,0.346970653532272,0.304465478312141,0.691846491768175,0.301445281105245,0.352766121407114,0.502666365318702,0.494389935468748,0.144599356919912,0.884610551949874,0.161766849947409,1.54589062922275,0.969750506270444,0,0.292780797011547,1.25668024088073,0.255457055208591,0.239630249011841,0,0.381210681219194,0.898743836428936,0,0.251308704225729,0,0.255715457330331,0.62336413367868,0.486723789203273,0.712875546952214,0.995255764880744,1.0108910337347,0,0.260240885925407,0,0.180062129805349,0,0.476255494059295,0.384341160854549,0,0.258703370739016,0.431135985865684,0.378212160335639,0.351902248327898,0,0,0,0.411564272815887,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0,0.697601834251224,0.268273401399619,0.583826711835847,0.329119699826961,0,0.243206428637567,0.584799949701329,0.219550115291051,0.536825675041487,0.420579897128254,0.411618449517138,0,0.264450566663544,1.2797295032114,0.232236671860439,0.38660238396628,0.605050573870028,0.22237804384487,0.570676878337677,0,0.329397909448022,0.754005626400808,0.198956472041151,0.779856348476481,0,0.216138049874694,0.995706366271836,0.189667900953082,0.114248512609729,1.1270773567308,0.407302655690628,0.387904974335251,0.911765658574141,0.569128834118316,0.738050739898011,0.31399745568275,0.863780147452604,1.1858105083486,0,0,0.449724224769707,0.811440485554012,0,0.50925170356284,1.72617682470486,0.972811360650212,0.274561413188081,4.31304619582064,0.744281895337007,1.24815069245824,0.252578877947112,0.717589654087649,0.482443521363367,3.69506380333209,0.37898282354097,0.162964976442026,0.509235257325564,1.17345124144251,1.50755631697634,3.09456733151818,2.92700471786698,1.57635144106191,1.10732344824387,1.43509291791738,2.13022309130459,1.89953480052485,4.91806799177139,0,0,2.45882136509518,2.48343071674259,0.321101179975584,0.117211686592203,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0.716906393857656,0.445597348164788,0,0,0,1.18586333383957,0,1.27746076687442,0.178065603667255,1.14020871547503,1.64970122972535,5.30980553359851,0.485561272309963,0,0.188605079755898,0.295301892880773,0.922305443831782,1.55056975900933,0.727067458955011,1.06949213515416,0.948110273807448,1.05418608574999,1.03135543248187,0.680879211507576,0.18006109403131,0.388076051348264,0,0.709360934569094,0,1.48094118541909,0.913394847343798,0.469343416127421,0.21183207086382,1.32317038832977,0.8244312647074,0.645857706783622,0,0.119372344003136,0.328281799490123,0.874442509889552,0.370850604021019,1.19609616558497,0.412773735926445,0.370389054739423,0.376736914009382,0.820165366326151,0.686334519619568,0.849892149969277,0.979660166265606,0.552799895217695,1.90934123603023,0.790839983952838,0.406638934253697,0.108005340821801,0,0.218362563746178,0.809186078308924,0.495920734352016,0.26175594198403,0.777689839750757,1.24267862617385,0.56369293868419,0.747582730219894,0.496375471371293,0.972255941720238,0.387479470433193,0.844780627453891,1.29092962510329,0.5208175393758,0.524296722128554,0.241584120826006,0.288030006257865,2.21207784439725,0.810900861160657,0.102710957164827,0.649604114888975,1.9692936523423,1.58945083825012,2.40390899039938,2.06765338044408,2.3222283488074,2.59103142626999,2.92395936896837,3.21611006441183,3.55983814069219,3.85693777199178,0.226730383615211,0,0,0,3.09103350451505,0.93841237725591,0.73260649706906,0.428736758158132,0.501572104035363,0,0,0,0,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.188626341386076,0.37456602987953,0.576226371643824,0.574354689556133,0,0.115884325944855,0.1929092204637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|short_description=p12@Ccnd3
|short_description=p12@Ccnd3
}}
}}

Latest revision as of 14:17, 26 September 2015

Short description:p12@Ccnd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_12_at_Ccnd3_5end
Coexpression cluster:MCL_coexpression_mm9:2215
Association with transcript: 107bp_to_ENSMUST00000171031, NM_001081635, NM_001081636, uc008cvk.1, uc008cvl.1, uc008cvm.1_5end
EntrezGene:Ccnd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p12@Ccnd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H24.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A23.22
thymus, neonate N25.CNhs11125.1362-25G73.56
thymus, neonate N30.CNhs11132.1393-42G23.86
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
respiratory system3.39e-1742
respiratory tract1.81e-1641
gland of gut7.09e-1224
epithelial bud7.24e-1217
endo-epithelium1.17e-1169
thymus3.62e-1123
neck3.62e-1123
respiratory system epithelium3.62e-1123
hemolymphoid system gland3.62e-1123
pharyngeal epithelium3.62e-1123
thymic region3.62e-1123
pharyngeal gland3.62e-1123
entire pharyngeal arch endoderm3.62e-1123
thymus primordium3.62e-1123
early pharyngeal endoderm3.62e-1123
pharynx1.66e-1024
upper respiratory tract1.66e-1024
chordate pharynx1.66e-1024
pharyngeal arch system1.66e-1024
pharyngeal region of foregut1.66e-1024
foregut2.46e-1080
mixed endoderm/mesoderm-derived structure6.20e-1035
epithelial fold1.69e-0920
lung5.31e-0914
respiratory tube5.31e-0914
respiration organ5.31e-0914
pair of lungs5.31e-0914
lung primordium5.31e-0914
lung bud5.31e-0914
hemopoietic organ5.86e-0929
immune organ5.86e-0929
segment of respiratory tract7.84e-0927
hemolymphoid system2.56e-0848
immune system2.56e-0848
hematopoietic system3.32e-0845
blood island3.32e-0845
gland2.40e-0765
thoracic cavity element6.30e-0717
thoracic segment organ6.30e-0717
thoracic cavity6.30e-0717
thoracic segment of trunk6.30e-0717
respiratory primordium6.30e-0717
endoderm of foregut6.30e-0717
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