FFCP PHASE1:Mm9::chr15:102236700..102236764,+: Difference between revisions
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{{FFCP|EntrezGene=20683|HGNC=|MCL_coexpression_id=1670|UniProt=O89090,G3X8Q0|association_with_transcript=0bp_to_ENSMUST00000163709,ENSMUST00000165924,NM_013672,uc007xvo.1,uc012aab.1_5end|description=CAGE_peak_1_at_Sp1_5end|id=chr15:102236700..102236764,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!6.19e-11!42;UBERON:0004921!7.12e-11!126;UBERON:0004185!7.12e-11!126;UBERON:0000926!8.47e-11!193;UBERON:0004120!8.47e-11!193;UBERON:0006603!8.47e-11!193;UBERON:0001007!8.50e-11!128;UBERON:0001555!8.50e-11!128;UBERON:0007026!8.50e-11!128;UBERON:0004119!1.23e-10!130;UBERON:0000925!1.23e-10!130;UBERON:0006595!1.23e-10!130;UBERON:0000065!1.41e-10!41;UBERON:0004177!2.92e-10!29;UBERON:0003408!1.26e-09!24;UBERON:0006562!1.98e-09!24;UBERON:0001557!1.98e-09!24;UBERON:0001042!1.98e-09!24;UBERON:0008814!1.98e-09!24;UBERON:0009145!1.98e-09!24;UBERON:0003104!2.80e-09!131;UBERON:0009142!2.80e-09!131;UBERON:0002370!2.83e-09!23;UBERON:0000974!2.83e-09!23;UBERON:0004807!2.83e-09!23;UBERON:0005058!2.83e-09!23;UBERON:0003351!2.83e-09!23;UBERON:0009113!2.83e-09!23;UBERON:0003295!2.83e-09!23;UBERON:0009722!2.83e-09!23;UBERON:0005562!2.83e-09!23;UBERON:0007690!2.83e-09!23;UBERON:0001041!1.31e-08!92;UBERON:0005911!1.66e-08!69;UBERON:0000077!1.67e-08!97;UBERON:0001048!3.52e-08!147|ontology_enrichment_uberon_v019_2=UBERON:0004921,2.37e-11,114;UBERON:0001007,2.98e-11,116;UBERON:0001555,2.98e-11,116;UBERON:0007026,2.98e-11,116;UBERON:0004119,4.60e-11,118;UBERON:0000925,4.60e-11,118;UBERON:0006595,4.60e-11,118;UBERON:0001004,6.19e-11,42;UBERON:0000065,1.41e-10,41;UBERON:0004177,2.92e-10,29;UBERON:0005057,2.92e-10,29;UBERON:0000077,6.67e-10,35;UBERON:0003408,1.26e-09,24;UBERON:0006562,1.98e-09,24;UBERON:0001557,1.98e-09,24;UBERON:0001042,1.98e-09,24;UBERON:0008814,1.98e-09,24;UBERON:0009145,1.98e-09,24;UBERON:0001041,2.70e-09,80;UBERON:0002370,2.83e-09,23;UBERON:0000974,2.83e-09,23;UBERON:0004807,2.83e-09,23;UBERON:0005058,2.83e-09,23;UBERON:0003351,2.83e-09,23;UBERON:0009113,2.83e-09,23;UBERON:0003295,2.83e-09,23;UBERON:0009722,2.83e-09,23;UBERON:0005562,2.83e-09,23;UBERON:0007690,2.83e-09,23;UBERON:0000153,5.80e-09,43;UBERON:0005911,1.66e-08,69;UBERON:0001048,5.69e-08,134;UBERON:0000926,1.40e-07,120;UBERON:0004120,1.40e-07,120;UBERON:0006603,1.40e-07,120;UBERON:0007811,2.32e-07,36|phase1_expression=12.8119077683835,16.7508195666893,12.739978702907,9.98131897312539,19.0340377379612,12.9267039372155,11.2134067485852,21.5635950147432,36.6050677594334,23.6405171585213,20.8885921235116,24.4900528115683,30.4737299277546,22.0299414095873,12.3250611871795,17.412872995525,18.88817070946,29.4957124609952,29.0682599244166,21.6438722416995,11.3958008802433,11.6170412905036,9.14199261986274,15.0392877425802,11.2410547722913,14.9300310669905,6.8921919385452,10.9890328669803,16.1519906537918,18.6502296022349,8.64748991555688,6.98533740805594,18.4519436275371,0,14.4425809875637,13.1325369833209,12.8626694445293,30.9713406745312,21.8773896466664,32.9819958703493,26.4704169613956,28.6879103682547,24.2755176515577,13.5968563413623,11.6583470902442,9.72797786456912,5.47673941043627,5.01457859675027,5.93152693383074,5.63846707315422,7.27929392451885,8.62515386189829,26.8452169692378,27.5637613964311,21.8460969442602,11.3194151855817,9.74213695791773,9.28209766099396,8.9019242778223,3.70293685490423,6.33831403506179,5.42151251310611,8.89294796111139,6.29929802096979,1.97773272513395,5.6838409195688,5.09320187881288,6.53171119046643,17.0050964185903,12.6905582031789,10.9368979902719,6.28432165688368,3.53389665522582,8.32937434661688,11.3097655801519,10.1114066527102,2.20231761998777,6.00130489000382,7.0659005297872,5.53922408466814,9.14876436024097,4.16730696445408,6.97957497503452,6.19038871034848,8.40390362772456,6.18720029494702,7.40332740155335,4.84638559145781,13.7821671866395,11.8647349367653,28.1168554040627,7.74381489283248,10.879541339324,12.4131734076698,6.49776417447669,9.40856462904405,10.3928870897496,12.7822741933543,15.0675882669664,9.89350808628953,13.239281459008,23.0987659345772,15.2883143823987,7.11066703153331,5.19578498426914,5.06719730950197,6.0662933401774,11.1900202124679,34.1798006414267,13.0629082377046,11.1030609130327,8.8294988710521,8.07154240396205,12.3592565253151,18.1086608988985,12.5666591329675,19.2812074832812,16.4843266888699,18.5768215909474,16.985519244478,14.575540218386,15.0311328471919,7.45567044872489,12.296793474485,10.0534419270458,17.3710797541842,18.092083800394,11.9980546198682,16.2649890653523,5.84183493678809,5.94750783664214,5.78010019719176,5.56237824615285,6.39288643325826,7.2725815595846,6.32740925964255,18.1274067653563,16.9193480029727,11.3725241295154,16.6249066150314,11.0602376518298,9.42598628177239,12.6043490863744,11.3028613376786,15.7844678031081,12.9394857487698,14.523767306758,12.1590584247337,17.0298714416945,19.6670323374532,15.3077478022636,14.9053098050751,19.18526019656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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20683 | |||
|HGNC= | |||
|MCL_coexpression_id=1670 | |||
|TSSclassifier=NA | |||
|UniProt=O89090,G3X8Q0 | |||
|association_with_transcript=0bp_to_ENSMUST00000163709,ENSMUST00000165924,NM_013672,uc007xvo.1,uc012aab.1_5end | |||
|cluster_id=chr15:102236700..102236764,+ | |||
|description=CAGE_peak_1_at_Sp1_5end | |||
|id=chr15:102236700..102236764,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!6.19e-11!42;UBERON:0004921!7.12e-11!126;UBERON:0004185!7.12e-11!126;UBERON:0000926!8.47e-11!193;UBERON:0004120!8.47e-11!193;UBERON:0006603!8.47e-11!193;UBERON:0001007!8.50e-11!128;UBERON:0001555!8.50e-11!128;UBERON:0007026!8.50e-11!128;UBERON:0004119!1.23e-10!130;UBERON:0000925!1.23e-10!130;UBERON:0006595!1.23e-10!130;UBERON:0000065!1.41e-10!41;UBERON:0004177!2.92e-10!29;UBERON:0003408!1.26e-09!24;UBERON:0006562!1.98e-09!24;UBERON:0001557!1.98e-09!24;UBERON:0001042!1.98e-09!24;UBERON:0008814!1.98e-09!24;UBERON:0009145!1.98e-09!24;UBERON:0003104!2.80e-09!131;UBERON:0009142!2.80e-09!131;UBERON:0002370!2.83e-09!23;UBERON:0000974!2.83e-09!23;UBERON:0004807!2.83e-09!23;UBERON:0005058!2.83e-09!23;UBERON:0003351!2.83e-09!23;UBERON:0009113!2.83e-09!23;UBERON:0003295!2.83e-09!23;UBERON:0009722!2.83e-09!23;UBERON:0005562!2.83e-09!23;UBERON:0007690!2.83e-09!23;UBERON:0001041!1.31e-08!92;UBERON:0005911!1.66e-08!69;UBERON:0000077!1.67e-08!97;UBERON:0001048!3.52e-08!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,2.37e-11,114;UBERON:0001007,2.98e-11,116;UBERON:0001555,2.98e-11,116;UBERON:0007026,2.98e-11,116;UBERON:0004119,4.60e-11,118;UBERON:0000925,4.60e-11,118;UBERON:0006595,4.60e-11,118;UBERON:0001004,6.19e-11,42;UBERON:0000065,1.41e-10,41;UBERON:0004177,2.92e-10,29;UBERON:0005057,2.92e-10,29;UBERON:0000077,6.67e-10,35;UBERON:0003408,1.26e-09,24;UBERON:0006562,1.98e-09,24;UBERON:0001557,1.98e-09,24;UBERON:0001042,1.98e-09,24;UBERON:0008814,1.98e-09,24;UBERON:0009145,1.98e-09,24;UBERON:0001041,2.70e-09,80;UBERON:0002370,2.83e-09,23;UBERON:0000974,2.83e-09,23;UBERON:0004807,2.83e-09,23;UBERON:0005058,2.83e-09,23;UBERON:0003351,2.83e-09,23;UBERON:0009113,2.83e-09,23;UBERON:0003295,2.83e-09,23;UBERON:0009722,2.83e-09,23;UBERON:0005562,2.83e-09,23;UBERON:0007690,2.83e-09,23;UBERON:0000153,5.80e-09,43;UBERON:0005911,1.66e-08,69;UBERON:0001048,5.69e-08,134;UBERON:0000926,1.40e-07,120;UBERON:0004120,1.40e-07,120;UBERON:0006603,1.40e-07,120;UBERON:0007811,2.32e-07,36 | |||
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| |||
|short_description=p1@Sp1 | |||
}} |
Latest revision as of 14:22, 26 September 2015
Short description: | p1@Sp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1670 |
Association with transcript: | 0bp_to_ENSMUST00000163709, ENSMUST00000165924, NM_013672, uc007xvo.1, uc012aab.1_5end |
EntrezGene: | Sp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data