FFCP PHASE1:Mm9::chr2:32837527..32837606,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:32837527..32837606,- to FFCP PHASE1:Mm9::chr2:32837527..32837606,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56017 | |EntrezGene=56017 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=641 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JIF3,E9Q181,Q2TK26,Q2TK27,Q8VDJ4 | |UniProt=Q9JIF3,E9Q181,Q2TK26,Q2TK27,Q8VDJ4 | ||
|association_with_transcript=0bp_to_ENSMUST00000028129,ENSMUST00000113191,ENSMUST00000113192,ENSMUST00000123643,ENSMUST00000130769,ENSMUST00000153484,ENSMUST00000164435,NM_019488,uc008jhf.1,uc008jhg.1,uc012buc.1,uc012bud.1_5end | |||
|cluster_id=chr2:32837527..32837606,- | |||
|description=CAGE_peak_1_at_Slc2a8_5end | |||
|id=chr2:32837527..32837606,- | |||
|ontology_enrichment_celltype=CL:0000055!3.75e-12!50;CL:0002319!3.29e-10!43;CL:0000221!6.23e-10!44;CL:0000133!6.23e-10!44;CL:0000393!1.16e-08!39;CL:0000211!1.16e-08!39;CL:0002321!7.13e-08!70;CL:0000220!7.13e-08!70;CL:0000540!5.66e-07!33;CL:0000047!5.66e-07!33;CL:0000031!5.66e-07!33;CL:0000404!5.66e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.29e-10,43;CL:0000221,6.23e-10,44;CL:0000133,6.23e-10,44;CL:0000393,1.16e-08,39;CL:0000211,1.16e-08,39;CL:0002321,7.13e-08,70;CL:0000540,5.66e-07,33;CL:0000047,5.66e-07,33;CL:0000031,5.66e-07,33;CL:0000404,5.66e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.96e-19!73;UBERON:0005743!2.96e-19!73;UBERON:0000073!2.40e-18!75;UBERON:0001016!2.40e-18!75;UBERON:0004121!3.85e-16!102;UBERON:0000924!3.85e-16!102;UBERON:0006601!3.85e-16!102;UBERON:0004111!1.49e-12!122;UBERON:0001049!3.76e-12!52;UBERON:0005068!3.76e-12!52;UBERON:0006241!3.76e-12!52;UBERON:0007135!3.76e-12!52;UBERON:0002346!3.86e-12!71;UBERON:0003075!3.86e-12!71;UBERON:0007284!3.86e-12!71;UBERON:0000025!7.19e-12!114;UBERON:0000955!8.37e-12!50;UBERON:0006238!8.37e-12!50;UBERON:0002616!1.57e-11!49;UBERON:0000033!6.85e-11!63;UBERON:0002020!1.45e-08!34;UBERON:0003080!1.11e-07!40;UBERON:0002780!2.14e-07!39;UBERON:0001890!2.14e-07!39;UBERON:0006240!2.14e-07!39;UBERON:0003056!3.71e-07!49;UBERON:0002791!4.86e-07!29;UBERON:0003528!4.86e-07!29;UBERON:0001893!4.86e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.96e-19,73;UBERON:0001016,2.40e-18,75;UBERON:0004121,6.98e-16,95;UBERON:0000924,6.98e-16,95;UBERON:0006601,6.98e-16,95;UBERON:0000073,3.41e-13,54;UBERON:0004111,1.49e-12,122;UBERON:0010314,1.85e-12,92;UBERON:0001049,3.76e-12,52;UBERON:0005068,3.76e-12,52;UBERON:0006241,3.76e-12,52;UBERON:0007135,3.76e-12,52;UBERON:0002346,4.43e-12,64;UBERON:0003075,4.43e-12,64;UBERON:0007284,4.43e-12,64;UBERON:0000025,7.19e-12,114;UBERON:0010371,1.03e-10,73;UBERON:0000955,2.36e-10,47;UBERON:0006238,2.36e-10,47;UBERON:0002616,4.36e-10,46;UBERON:0002020,1.45e-08,34;UBERON:0003080,1.11e-07,40;UBERON:0002780,2.14e-07,39;UBERON:0001890,2.14e-07,39;UBERON:0006240,2.14e-07,39;UBERON:0003056,3.71e-07,49;UBERON:0003528,4.86e-07,29;UBERON:0002791,4.86e-07,29;UBERON:0001893,4.86e-07,29 | |||
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| |phase1_expression=12.1713123799643,24.0793031271159,28.2099528421512,6.35174843744343,9.01612313903425,5.20425742926858,7.47560449905682,2.84071311571468,1.97104211012333,1.40438715793196,0.171217968225505,0.0797721589953364,3.25281386869291,3.4968160967599,18.9872564234928,9.71881283471165,16.7894850750755,5.67831897644828,4.38766187538364,5.94145512517242,31.5510606460469,7.84398514486994,8.097193463307,22.3989391910769,34.8702107222098,18.3754228516806,16.3689558540448,11.635446565038,11.4014051673824,5.29263272495855,9.09095093686749,15.2407361630311,16.6067492647834,0,4.62162591602039,4.82080471539628,4.08338712524738,1.25559489221072,1.5626706890476,0.523523743973798,0,1.36609096991689,0,21.9060463277504,21.086401693659,18.5382219683298,95.4517440104608,25.5089432965122,37.7860234303292,41.8024283009709,31.2169720224558,30.188038516644,3.02008690903925,4.35217285206807,4.7053131879945,19.551717138732,25.2149427146106,26.2992767061496,15.1737345644698,15.340738398889,17.747279298173,28.8017852258762,36.4610866405567,94.9394201731876,131.519226221408,107.282497356861,67.4100248666411,71.8488230951307,14.9313041724208,13.9056116481641,15.1433972172995,35.7063730504754,29.154647405613,13.229006315215,9.20116521775069,17.4651569455904,40.7428759697738,26.6866536598042,29.1852413186863,14.1118327871307,10.3381037270723,11.9810075228055,41.5982668512058,37.7050948721226,29.9484565642548,20.3293723976831,18.2235751422852,18.6399445825301,3.63485727999283,14.2074533000757,20.2905142091174,17.2084775396277,65.2772480359441,47.4938808641279,47.4336784736798,46.5947962581229,25.2799956237153,16.5317412900716,19.743736349818,19.4336765980687,10.9857867425811,12.8326477414318,2.54805239706646,7.11066703153331,6.49473123033642,6.58735650235256,6.0662933401774,19.2970756725211,5.17875767294343,21.8209944425292,11.6235168933311,9.13396434936424,19.3717017695089,11.7563659631046,14.345822270556,18.975655290781,6.42706916109372,22.4129003225863,14.153768831198,10.5148452465816,15.2380647737672,11.6370060752453,14.9113408974498,27.5213949190854,24.9241581108012,9.96282515313506,3.71426885968353,2.99951365496704,2.92261522268049,22.1690146319138,23.7900313465686,16.5863744788981,22.0756886644191,19.4343747571051,26.1812936145046,22.8760180925538,9.67473956578005,17.9146037678534,26.5358896355358,25.0425808504904,9.49879233627737,11.9549094305406,13.5046597354012,10.8507468841715,13.2671173345089,10.1209839025031,13.118241438362,18.8853460639481,12.0718076042392,11.3463648100692,13.5482365606241,12.7133524807993,7.78532297831674,6.96504333044333,7.61393904709391,8.35943920637671,2.80885274925294,4.88961023517959,4.26245249093389,10.3562886267751,9.61556845922494,10.0834754418168,11.3637473080901,10.6252685143598,9.87309522479221,11.6266972375204,15.8281306825775,17.3980360127083,14.9749463421267,15.9242440156722,17.1055188141756,15.2047986922346,21.9550115291051,19.4599307202539,14.930586348053,12.7601719350313,3.63460661282178,8.72686869989696,10.6644125267617,8.59275685883622,8.37638498593607,11.2942773789072,18.2349995952794,24.9195570207452,14.2358718463353,25.1989400727737,30.6628954736329,26.6601672535142,29.4395771549871,6.29173586057955,8.64552199498777,7.96565093017469,11.7594098590911,11.8818453114118,22.5415471346161,11.4044743593376,13.3827216145662,20.3393877681924,14.6076400757034,9.74226976665374,17.2698600625512,21.5945036863151,25.1984733024077,6.00642380577939,6.87956482896211,6.2961391467759,7.91154473415161,5.54707467430559,9.93040821947537,7.48009957372108,13.2950885955529,13.7280706594041,5.75072826109418,17.4906245404197,12.4815069245824,22.4795201372929,19.5543180738884,30.3939418458921,17.1820466854942,8.14813070613084,9.28900365719548,6.11082308790677,7.74477819352057,12.730475565578,12.3782693260727,14.6350235893349,10.4039195110086,9.52298165489732,12.2780171866265,12.1258852889646,11.0518388394173,17.2132379711999,28.6503439484617,25.5635671394793,18.1952781017043,11.313406598494,24.4036896781444,24.0283957514016,9.67216177722385,21.7124997395761,17.6684602873104,16.7888660047555,24.3428439438063,22.7020358054924,20.0518806674155,22.6461224631066,19.8357243820698,26.3030272120181,20.9502522311657,20.8858855674175,16.7489300545757,7.65682095769198,11.4020871547503,13.1976098378028,29.2039304347918,10.1967867185092,7.25576536715402,6.41257271170054,15.0603965369194,9.22305443831782,12.4045580720746,15.6319503675327,13.1904030002347,7.58488219045958,15.8127912862498,17.5330423521918,12.9367050186439,11.8840322060665,13.8413791647547,13.5032332069903,13.4778577568128,13.9127677729615,12.3411765451591,18.267896946876,6.8054795338476,15.2519091021951,15.6575162619023,14.6748765117917,12.5942252822806,9.04693873922338,10.6241386162791,9.19189038572343,11.3677526285642,27.4429446975554,10.2522528478712,9.90656966223468,9.81530995059472,9.23005439322986,9.15851325730869,10.5237959675,3.0596117398894,4.05859211738608,2.62579950228405,21.9574242143476,12.0207677560831,6.91286188231286,9.07244862903131,7.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| ||
|short_description=p1@Slc2a8 | |||
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Latest revision as of 14:56, 26 September 2015
Short description: | p1@Slc2a8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc2a8_5end |
Coexpression cluster: | MCL_coexpression_mm9:641 |
Association with transcript: | 0bp_to_ENSMUST00000028129, ENSMUST00000113191, ENSMUST00000113192, ENSMUST00000123643, ENSMUST00000130769, ENSMUST00000153484, ENSMUST00000164435, NM_019488, uc008jhf.1, uc008jhg.1, uc012buc.1, uc012bud.1_5end |
EntrezGene: | Slc2a8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.29e-10 | 43 |
ectodermal cell | 6.23e-10 | 44 |
neurectodermal cell | 6.23e-10 | 44 |
electrically responsive cell | 1.16e-08 | 39 |
electrically active cell | 1.16e-08 | 39 |
embryonic cell | 7.13e-08 | 70 |
neuron | 5.66e-07 | 33 |
neuronal stem cell | 5.66e-07 | 33 |
neuroblast | 5.66e-07 | 33 |
electrically signaling cell | 5.66e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.96e-19 | 73 |
nervous system | 2.40e-18 | 75 |
ectoderm-derived structure | 6.98e-16 | 95 |
ectoderm | 6.98e-16 | 95 |
presumptive ectoderm | 6.98e-16 | 95 |
regional part of nervous system | 3.41e-13 | 54 |
anatomical conduit | 1.49e-12 | 122 |
structure with developmental contribution from neural crest | 1.85e-12 | 92 |
neural tube | 3.76e-12 | 52 |
neural rod | 3.76e-12 | 52 |
future spinal cord | 3.76e-12 | 52 |
neural keel | 3.76e-12 | 52 |
neurectoderm | 4.43e-12 | 64 |
neural plate | 4.43e-12 | 64 |
presumptive neural plate | 4.43e-12 | 64 |
tube | 7.19e-12 | 114 |
ecto-epithelium | 1.03e-10 | 73 |
brain | 2.36e-10 | 47 |
future brain | 2.36e-10 | 47 |
regional part of brain | 4.36e-10 | 46 |
gray matter | 1.45e-08 | 34 |
anterior neural tube | 1.11e-07 | 40 |
regional part of forebrain | 2.14e-07 | 39 |
forebrain | 2.14e-07 | 39 |
future forebrain | 2.14e-07 | 39 |
pre-chordal neural plate | 3.71e-07 | 49 |
brain grey matter | 4.86e-07 | 29 |
regional part of telencephalon | 4.86e-07 | 29 |
telencephalon | 4.86e-07 | 29 |