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FFCP PHASE1:Mm9::chr12:47920074..47920083,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=664883
|EntrezGene=664883
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=Q9JKN6
|UniProt=Q9JKN6
|association_with_transcript=-312bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end
|association_with_transcript=-312bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end
|cluster_id=chr12:47920074..47920083,-
|description=CAGE_peak_6_at_Nova1_5end
|description=CAGE_peak_6_at_Nova1_5end
|id=chr12:47920074..47920083,-
|id=chr12:47920074..47920083,-
|ontology_enrichment_celltype=CL:0000117!6.34e-15!23;CL:0000337!6.34e-15!23;CL:0000540!4.45e-14!33;CL:0000047!4.45e-14!33;CL:0000031!4.45e-14!33;CL:0000404!4.45e-14!33;CL:0002319!2.33e-10!43;CL:0000393!2.37e-10!39;CL:0000211!2.37e-10!39;CL:0000221!2.38e-10!44;CL:0000133!2.38e-10!44;CL:0000055!1.81e-07!50
|ontology_enrichment_celltype=CL:0000117!6.34e-15!23;CL:0000337!6.34e-15!23;CL:0000540!4.45e-14!33;CL:0000047!4.45e-14!33;CL:0000031!4.45e-14!33;CL:0000404!4.45e-14!33;CL:0002319!2.33e-10!43;CL:0000393!2.37e-10!39;CL:0000211!2.37e-10!39;CL:0000221!2.38e-10!44;CL:0000133!2.38e-10!44;CL:0000055!1.81e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-26,23;CL:0000337,1.22e-26,23;CL:0000540,1.38e-19,33;CL:0000047,1.38e-19,33;CL:0000031,1.38e-19,33;CL:0000404,1.38e-19,33;CL:0000393,6.16e-16,39;CL:0000211,6.16e-16,39;CL:0002319,4.50e-14,43;CL:0000221,1.16e-13,44;CL:0000133,1.16e-13,44;CL:0002612,3.16e-09,3;CL:0000120,4.02e-09,3;CL:0002613,8.21e-09,3;CL:0002610,2.61e-08,3;CL:0002321,4.05e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!7.39e-18!102;UBERON:0000924!7.39e-18!102;UBERON:0006601!7.39e-18!102;UBERON:0001017!2.42e-16!73;UBERON:0005743!2.42e-16!73;UBERON:0000073!9.70e-16!75;UBERON:0001016!9.70e-16!75;UBERON:0002346!2.99e-14!71;UBERON:0003075!2.99e-14!71;UBERON:0007284!2.99e-14!71;UBERON:0000033!3.89e-12!63;UBERON:0001049!2.47e-11!52;UBERON:0005068!2.47e-11!52;UBERON:0006241!2.47e-11!52;UBERON:0007135!2.47e-11!52;UBERON:0003056!1.10e-09!49;UBERON:0000955!1.41e-09!50;UBERON:0006238!1.41e-09!50;UBERON:0002616!2.25e-09!49;UBERON:0002020!1.28e-08!34
|ontology_enrichment_uberon=UBERON:0004121!7.39e-18!102;UBERON:0000924!7.39e-18!102;UBERON:0006601!7.39e-18!102;UBERON:0001017!2.42e-16!73;UBERON:0005743!2.42e-16!73;UBERON:0000073!9.70e-16!75;UBERON:0001016!9.70e-16!75;UBERON:0002346!2.99e-14!71;UBERON:0003075!2.99e-14!71;UBERON:0007284!2.99e-14!71;UBERON:0000033!3.89e-12!63;UBERON:0001049!2.47e-11!52;UBERON:0005068!2.47e-11!52;UBERON:0006241!2.47e-11!52;UBERON:0007135!2.47e-11!52;UBERON:0003056!1.10e-09!49;UBERON:0000955!1.41e-09!50;UBERON:0006238!1.41e-09!50;UBERON:0002616!2.25e-09!49;UBERON:0002020!1.28e-08!34
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.89e-22,73;UBERON:0001016,3.90e-21,75;UBERON:0003076,1.01e-20,12;UBERON:0003057,1.01e-20,12;UBERON:0000073,5.02e-20,54;UBERON:0004121,3.81e-18,95;UBERON:0000924,3.81e-18,95;UBERON:0006601,3.81e-18,95;UBERON:0001049,4.58e-17,52;UBERON:0005068,4.58e-17,52;UBERON:0006241,4.58e-17,52;UBERON:0007135,4.58e-17,52;UBERON:0002240,2.62e-16,6;UBERON:0005174,2.62e-16,6;UBERON:0001137,2.62e-16,6;UBERON:0002346,6.45e-16,64;UBERON:0003075,6.45e-16,64;UBERON:0007284,6.45e-16,64;UBERON:0001948,6.18e-14,5;UBERON:0002315,6.18e-14,5;UBERON:0010371,2.71e-13,73;UBERON:0010314,1.86e-09,92;UBERON:0002257,3.16e-09,3;UBERON:0002616,7.21e-09,46;UBERON:0000955,1.31e-08,47;UBERON:0006238,1.31e-08,47;UBERON:0002020,1.42e-08,34;UBERON:0004684,2.61e-08,3;UBERON:0002275,2.61e-08,3;UBERON:0002420,5.60e-08,8;UBERON:0007245,5.60e-08,8;UBERON:0010009,5.60e-08,8;UBERON:0010011,5.60e-08,8;UBERON:0000454,5.60e-08,8;UBERON:0004733,5.17e-07,6;UBERON:0004732,5.17e-07,6;UBERON:0002028,5.17e-07,6;UBERON:0007277,5.17e-07,6
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,7.28339259094552,11.1088105647127,6.33831403506179,0,0,0,0,0,0.299600110518405,0.768436610643109,0.311068836925433,0.135005938331691,0.210324961351382,6.56997264128748,4.63823935998388,0.734944795289724,0.862609239164127,0.919218786610021,3.30347642998166,4.97980618532232,4.14737639791857,5.14356522147756,8.14240028061446,4.68822033501084,2.51264699101243,0.56276261003168,2.90316670775939,7.66034322231536,10.5355043791336,7.45597783301202,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0,0,2.63502717310392,4.1889341362691,0,0,0,0,3.74476598512057,0.457500602818626,0.251308704225729,0.347648640384553,0.511430914660661,2.28566849015516,1.62241263067758,0.203678727700633,0.124406970610093,0,0.420883711772948,0.260240885925407,0.689706313300419,2.16074555766419,0.753524089178575,0.816437989815934,0.896796041993948,0.281105173679186,1.29351685369508,0.215567992932842,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0.61734640922383,0,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0.393528463494808,0,0,0,0,0,0,0.0810688095458557,0.584799949701329,0,0.134206418760372,0.841159794256509,0.514523061896422,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0,0,0,0,0,0,0,0.491764273019036,0,5.61927064957272,3.39913891117389,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0,0.668396022247182,0.566153061577665,0.404810701674894,1.16902343164525,0,0.321321316421807,0.141940085208269,0,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,1.36175842301515,0,0,0.214337035031592,0.532020700926821,0.535106452806212,0,0,0,0,0,0.49465875882444,0.161464426695906,0.482503399425247,0.238744688006273,0,0.291480836629851,5.56275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0,0,0.549454872801795,0,0,0.564751842617067,0,0.572895513439397,1.03111909406213,0,0,0.675022500231806,1.35096360967266,0,0,0.830298780673413,0.798049746802062,0.682934423016537,0.729320151204882,1.04806581313991,0.919217542250071,0.222246727801615,1.03017528619447,1.28367683836726,1.01078884705519,1.2673964994512,1.32038438970253,0.655490552289177,1.15245274328765,0.804096565378586,0,0.347652977834566,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0.354951612318675,0.953744759789284,0.726732083161643,0.564656282491984,0.761531471025089,0.914639864363863,0.526139422875686,0.543216455383447,0.561142271657738,0.593175090620871,0.492522411877817,0.818462086339379,0.464810523557898,0.578719832943424,0.999242311751784,0.935726433781634,0.644613162144895,0.765153328275374,0.441182838239031,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,7.28339259094552,11.1088105647127,6.33831403506179,0,0,0,0,0,0.299600110518405,0.768436610643109,0.311068836925433,0.135005938331691,0.210324961351382,6.56997264128748,4.63823935998388,0.734944795289724,0.862609239164127,0.919218786610021,3.30347642998166,4.97980618532232,4.14737639791857,5.14356522147756,8.14240028061446,4.68822033501084,2.51264699101243,0.56276261003168,2.90316670775939,7.66034322231536,10.5355043791336,7.45597783301202,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0,0,2.63502717310392,4.1889341362691,0,0,0,0,3.74476598512057,0.457500602818626,0.251308704225729,0.347648640384553,0.511430914660661,2.28566849015516,1.62241263067758,0.203678727700633,0.124406970610093,0,0.420883711772948,0.260240885925407,0.689706313300419,2.16074555766419,0.753524089178575,0.816437989815934,0.896796041993948,0.281105173679186,1.29351685369508,0.215567992932842,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0.61734640922383,0,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0.393528463494808,0,0,0,0,0,0,0.0810688095458557,0.584799949701329,0,0.134206418760372,0.841159794256509,0.514523061896422,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0,0,0,0,0,0,0,0.491764273019036,0,5.61927064957272,3.39913891117389,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0,0.668396022247182,0.566153061577665,0.404810701674894,1.16902343164525,0,0.321321316421807,0.141940085208269,0,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,1.36175842301515,0,0,0.214337035031592,0.532020700926821,0.535106452806212,0,0,0,0,0,0.49465875882444,0.161464426695906,0.482503399425247,0.238744688006273,0,0.291480836629851,5.56275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0,0,0.549454872801795,0,0,0.564751842617067,0,0.572895513439397,1.03111909406213,0,0,0.675022500231806,1.35096360967266,0,0,0.830298780673413,0.798049746802062,0.682934423016537,0.729320151204882,1.04806581313991,0.919217542250071,0.222246727801615,1.03017528619447,1.28367683836726,1.01078884705519,1.2673964994512,1.32038438970253,0.655490552289177,1.15245274328765,0.804096565378586,0,0.347652977834566,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0.354951612318675,0.953744759789284,0.726732083161643,0.564656282491984,0.761531471025089,0.914639864363863,0.526139422875686,0.543216455383447,0.561142271657738,0.593175090620871,0.492522411877817,0.818462086339379,0.464810523557898,0.578719832943424,0.999242311751784,0.935726433781634,0.644613162144895,0.765153328275374,0.441182838239031,0.231867835620421
|short_description=p6@Nova1
|short_description=p6@Nova1
}}
}}

Latest revision as of 15:25, 26 September 2015

Short description:p6@Nova1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Nova1_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: -312bp_to_ENSMUST00000021438, NM_021361, uc007nmd.2, uc007nme.2_5end
EntrezGene:Nova1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Nova1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.28
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system6.89e-2273
nervous system3.90e-2175
posterior neural tube1.01e-2012
chordal neural plate1.01e-2012
regional part of nervous system5.02e-2054
ectoderm-derived structure3.81e-1895
ectoderm3.81e-1895
presumptive ectoderm3.81e-1895
neural tube4.58e-1752
neural rod4.58e-1752
future spinal cord4.58e-1752
neural keel4.58e-1752
spinal cord2.62e-166
dorsal region element2.62e-166
dorsum2.62e-166
neurectoderm6.45e-1664
neural plate6.45e-1664
presumptive neural plate6.45e-1664
regional part of spinal cord6.18e-145
gray matter of spinal cord6.18e-145
ecto-epithelium2.71e-1373
structure with developmental contribution from neural crest1.86e-0992
ventral horn of spinal cord3.16e-093
regional part of brain7.21e-0946
brain1.31e-0847
future brain1.31e-0847
gray matter1.42e-0834
raphe nuclei2.61e-083
reticular formation2.61e-083
basal ganglion5.60e-088
nuclear complex of neuraxis5.60e-088
aggregate regional part of brain5.60e-088
collection of basal ganglia5.60e-088
cerebral subcortex5.60e-088
segmental subdivision of hindbrain5.17e-076
segmental subdivision of nervous system5.17e-076
hindbrain5.17e-076
presumptive hindbrain5.17e-076
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