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FFCP PHASE1:Mm9::chr17:56261320..56261343,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:56261320..56261343,-
|DHSsupport=NA
|short_description=p1@Lrg1
|DPIdataset=NA
|description=CAGE_peak_1_at_Lrg1_5end
|association_with_transcript=25bp_to_ENSMUST00000041357,NM_029796,uc008dbb.1_5end
|EntrezGene=76905
|EntrezGene=76905
|HGNC=
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=Q91XL1
|UniProt=Q91XL1
|association_with_transcript=25bp_to_ENSMUST00000041357,NM_029796,uc008dbb.1_5end
|cluster_id=chr17:56261320..56261343,-
|description=CAGE_peak_1_at_Lrg1_5end
|id=chr17:56261320..56261343,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005256!3.35e-10!47;UBERON:0002365!1.50e-09!25;UBERON:0002330!1.50e-09!25;UBERON:0005172!7.72e-09!49;UBERON:0005173!7.72e-09!49;UBERON:0002417!7.72e-09!49;UBERON:0000916!7.72e-09!49;UBERON:0002100!2.12e-08!98;UBERON:0009854!2.43e-08!23;UBERON:0009856!2.43e-08!23;UBERON:0007023!3.45e-08!51;UBERON:0002107!4.43e-08!22;UBERON:0007499!4.43e-08!22;UBERON:0006925!4.43e-08!22;UBERON:0009497!4.43e-08!22;UBERON:0000015!4.43e-08!22;UBERON:0002423!4.43e-08!22;UBERON:0006235!4.43e-08!22;UBERON:0008835!4.43e-08!22;UBERON:0003894!4.43e-08!22;UBERON:0004161!4.43e-08!22;UBERON:0008836!4.43e-08!22;UBERON:0009569!5.66e-08!66;UBERON:0005177!1.02e-07!85;UBERON:0003104!3.06e-07!131;UBERON:0009142!3.06e-07!131;UBERON:0000466!4.32e-07!79
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.06e-11,45;UBERON:0002365,6.61e-10,25;UBERON:0002330,6.61e-10,25;UBERON:0002100,9.29e-10,90;UBERON:0009854,1.43e-08,23;UBERON:0009856,1.43e-08,23;UBERON:0005177,2.53e-08,79;UBERON:0002107,2.82e-08,22;UBERON:0007499,2.82e-08,22;UBERON:0006925,2.82e-08,22;UBERON:0009497,2.82e-08,22;UBERON:0000015,2.82e-08,22;UBERON:0002423,2.82e-08,22;UBERON:0006235,2.82e-08,22;UBERON:0008835,2.82e-08,22;UBERON:0003894,2.82e-08,22;UBERON:0004161,2.82e-08,22;UBERON:0008836,2.82e-08,22;UBERON:0005172,4.13e-08,49;UBERON:0005173,4.13e-08,49;UBERON:0002417,4.13e-08,49;UBERON:0000916,4.13e-08,49;UBERON:0009569,4.52e-08,66;UBERON:0003104,4.72e-08,61;UBERON:0009142,4.72e-08,61;UBERON:0007023,2.65e-07,51
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,31.9785371343036,29.9663395736942,4.19737126876888,2.36596624018678,2.05671650408608,7.63901373236454,17.008658030214,0,0,0,0.22940928106717,1.14846392823004,0.430761996159075,0,0.380046838912748,0.504060259519861,2.88249663851896,0,0,15.8481681015439,0,0,0,2745.14896600338,1058.70939182975,1340.7443083169,1332.93255187828,1276.61201138734,1156.48566092021,0.125896817975577,0.101376931219515,0,0.782391344348039,0.218025156380447,3.29529274101708,1.94429899074283,0,0,0.838913030288682,0.725362142011344,1.68046899571232,1.02903774414379,3.72493471920384,2.57836046138721,0,0,0,0,0,1.3498495759221,0,0.7104801149461,1.49800055259202,0.384218305321555,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0,0,0,0.558365998002762,0.56276261003168,1.5279824777681,0.294628585473668,0.569486723196412,0,0.302904773332736,0.906858721281426,60.0019491612473,485.279066617502,978.478749205453,779.331408725008,735.546904550761,489.693387597388,168.673748578234,0,0,0,0.14084341977668,0,5.09610479413291,0,0,0,0,403.868382566315,68.8774770501477,16.92240385339,0.346970653532272,5.78484408793068,7.84092690670599,9.79697163592047,9.99504010653491,13.571991863605,1.97755974187499,104.689934410016,118.537813961283,3.88240439873782,15.9005893291483,21.3345111379498,7.45567044872489,0.878342391034642,0.41889341362691,3.83185582812887,0.359445373517761,2.39961092397363,0.508280908292259,4.19413790333504,4.11750542536764,0,3.12883776346098,0.255715457330331,0.41557608911912,1.46017136760982,0.203678727700633,41.1787072719408,18.9542068825256,3.15662783829711,0,0,0,0.452114453507145,0.95251098811859,0,0.562210347358373,3.3631438196072,0,0,0,0.219195732427575,0,0.696504333044333,0.61734640922383,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,1.3413670069981,1.05088808130453,0.658239399653922,0.656669856316381,1.05389452409612,1.16959989940266,4.39100230582101,6.03928884421673,0.210289948564127,0.205809224758569,0.991256348951394,9.52022039988759,0,0,0,0,0.22237804384487,0.760902504450237,4.2707615539006,4.44687177754829,2.5133520880027,1.79060824837036,1.36474860983384,3.59527763461689,1.29682829924817,2.58883655230677,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.561086559122548,0.316182685621286,3.39503340353085,0.627994911365499,0.740382983530803,309.792995306071,0,0.196558995113203,0.449724224769707,0.811440485554012,1.4470629585145,11.2035374783825,44.5929013048756,116.413092824475,68.9149147102084,171.084165767552,117.224398515579,64.591798334714,231.362252199554,188.905476438574,168.372788955815,95.5173993161346,0.189491411770485,0,0,0,0.335012514883631,3.57065461329021,7.41507861859636,7.72412206120336,10.6303051031412,11.1618338060241,39.8187854759243,87.5512858060091,99.6632013626615,0,0,133.268117988159,56.0151594998607,0.80275294993896,1.28932855251423,0,11.6136626514012,0.315508219416257,0,0,0,0.668396022247182,0.566153061577665,0.809621403349789,0.876767573733936,0.395287777946524,0.642642632843614,17.1747503102005,2.84904965867608,1.62886959353576,17.1568927891437,15.9294166007955,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,1.53717573971964,2.06742634534577,1.45413491791002,1.78248689192361,6.32073515871632,8.4334886859999,8.25084345985495,1.36175842301515,0,0.129358683782755,0,0.177340233642274,1.60531935841864,1.31639216481697,7.91608867697958,5.39744928546534,1.90648863777438,7.49796553386871,53.588032205981,2.26050197374268,10.072258463002,14.3246812803764,22.3231623653283,4.66369338607761,3.15223013417866,106.62342961786,4.33412422722767,44.2614920413611,38.0504283149476,21.597687979922,27.2246026115762,0.509935289981566,2.6590775941495,4.00779924032829,11.4560474161814,0,0.203319467126849,0.216010681643603,0,1.09181281873089,2.02296519577231,5.2898211664215,3.92633912976044,5.4438288782553,19.2615187056947,3.38215763210514,0,0,0.194451188344048,0.387479470433193,0,1.17357238645754,0.13020438484395,0,0.483168241652012,2.30424005006292,8.84831137758899,0,0.410843828659309,0.25984164595559,0.537080087002444,0.596044064343795,0.721172697119813,0.443068581523732,0.807731599585181,0.533447646584999,1.61321896218945,2.33898913775406,1.15454209968395,1.75315353272353,12.0167103316062,0,0,0,23.7623200659594,309.300719543548,76.5573789437168,28.2966260384367,8.02515366456581,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0.486213434136588,0.209613162627982,1.2869045591501,2.66696073361938,2.67845574410562,2.56735367673452,5.05394423527595,2.78827229879264,2.45214243801899,3.09016974650612,2.62503124859964,2.64203157195821,1.90517476513229,2.66533949673168,2.70072908649187,3.29668720642645,3.53277408322554,3.42869252385415,3.54951612318675,2.86123427936785,2.90692833264657,1.97629698872194,2.45382362885862,3.47563148458268,2.10455769150274,2.30866993537965,1.68342681497322,2.60997039873183,2.06859412988683,4.91077251803627,3.09873682371932,3.08650577569826,1.99848462350357,6.55008503647143,15.9004579995741,5.54736162999646,21.397367654593,13.6802023016049
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,31.9785371343036,29.9663395736942,4.19737126876888,2.36596624018678,2.05671650408608,7.63901373236454,17.008658030214,0,0,0,0.22940928106717,1.14846392823004,0.430761996159075,0,0.380046838912748,0.504060259519861,2.88249663851896,0,0,15.8481681015439,0,0,0,2745.14896600338,1058.70939182975,1340.7443083169,1332.93255187828,1276.61201138734,1156.48566092021,0.125896817975577,0.101376931219515,0,0.782391344348039,0.218025156380447,3.29529274101708,1.94429899074283,0,0,0.838913030288682,0.725362142011344,1.68046899571232,1.02903774414379,3.72493471920384,2.57836046138721,0,0,0,0,0,1.3498495759221,0,0.7104801149461,1.49800055259202,0.384218305321555,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0,0,0,0.558365998002762,0.56276261003168,1.5279824777681,0.294628585473668,0.569486723196412,0,0.302904773332736,0.906858721281426,60.0019491612473,485.279066617502,978.478749205453,779.331408725008,735.546904550761,489.693387597388,168.673748578234,0,0,0,0.14084341977668,0,5.09610479413291,0,0,0,0,403.868382566315,68.8774770501477,16.92240385339,0.346970653532272,5.78484408793068,7.84092690670599,9.79697163592047,9.99504010653491,13.571991863605,1.97755974187499,104.689934410016,118.537813961283,3.88240439873782,15.9005893291483,21.3345111379498,7.45567044872489,0.878342391034642,0.41889341362691,3.83185582812887,0.359445373517761,2.39961092397363,0.508280908292259,4.19413790333504,4.11750542536764,0,3.12883776346098,0.255715457330331,0.41557608911912,1.46017136760982,0.203678727700633,41.1787072719408,18.9542068825256,3.15662783829711,0,0,0,0.452114453507145,0.95251098811859,0,0.562210347358373,3.3631438196072,0,0,0,0.219195732427575,0,0.696504333044333,0.61734640922383,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,1.3413670069981,1.05088808130453,0.658239399653922,0.656669856316381,1.05389452409612,1.16959989940266,4.39100230582101,6.03928884421673,0.210289948564127,0.205809224758569,0.991256348951394,9.52022039988759,0,0,0,0,0.22237804384487,0.760902504450237,4.2707615539006,4.44687177754829,2.5133520880027,1.79060824837036,1.36474860983384,3.59527763461689,1.29682829924817,2.58883655230677,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.561086559122548,0.316182685621286,3.39503340353085,0.627994911365499,0.740382983530803,309.792995306071,0,0.196558995113203,0.449724224769707,0.811440485554012,1.4470629585145,11.2035374783825,44.5929013048756,116.413092824475,68.9149147102084,171.084165767552,117.224398515579,64.591798334714,231.362252199554,188.905476438574,168.372788955815,95.5173993161346,0.189491411770485,0,0,0,0.335012514883631,3.57065461329021,7.41507861859636,7.72412206120336,10.6303051031412,11.1618338060241,39.8187854759243,87.5512858060091,99.6632013626615,0,0,133.268117988159,56.0151594998607,0.80275294993896,1.28932855251423,0,11.6136626514012,0.315508219416257,0,0,0,0.668396022247182,0.566153061577665,0.809621403349789,0.876767573733936,0.395287777946524,0.642642632843614,17.1747503102005,2.84904965867608,1.62886959353576,17.1568927891437,15.9294166007955,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,1.53717573971964,2.06742634534577,1.45413491791002,1.78248689192361,6.32073515871632,8.4334886859999,8.25084345985495,1.36175842301515,0,0.129358683782755,0,0.177340233642274,1.60531935841864,1.31639216481697,7.91608867697958,5.39744928546534,1.90648863777438,7.49796553386871,53.588032205981,2.26050197374268,10.072258463002,14.3246812803764,22.3231623653283,4.66369338607761,3.15223013417866,106.62342961786,4.33412422722767,44.2614920413611,38.0504283149476,21.597687979922,27.2246026115762,0.509935289981566,2.6590775941495,4.00779924032829,11.4560474161814,0,0.203319467126849,0.216010681643603,0,1.09181281873089,2.02296519577231,5.2898211664215,3.92633912976044,5.4438288782553,19.2615187056947,3.38215763210514,0,0,0.194451188344048,0.387479470433193,0,1.17357238645754,0.13020438484395,0,0.483168241652012,2.30424005006292,8.84831137758899,0,0.410843828659309,0.25984164595559,0.537080087002444,0.596044064343795,0.721172697119813,0.443068581523732,0.807731599585181,0.533447646584999,1.61321896218945,2.33898913775406,1.15454209968395,1.75315353272353,12.0167103316062,0,0,0,23.7623200659594,309.300719543548,76.5573789437168,28.2966260384367,8.02515366456581,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0.486213434136588,0.209613162627982,1.2869045591501,2.66696073361938,2.67845574410562,2.56735367673452,5.05394423527595,2.78827229879264,2.45214243801899,3.09016974650612,2.62503124859964,2.64203157195821,1.90517476513229,2.66533949673168,2.70072908649187,3.29668720642645,3.53277408322554,3.42869252385415,3.54951612318675,2.86123427936785,2.90692833264657,1.97629698872194,2.45382362885862,3.47563148458268,2.10455769150274,2.30866993537965,1.68342681497322,2.60997039873183,2.06859412988683,4.91077251803627,3.09873682371932,3.08650577569826,1.9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|short_description=p1@Lrg1
}}
}}

Latest revision as of 16:56, 26 September 2015

Short description:p1@Lrg1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrg1_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: 25bp_to_ENSMUST00000041357, NM_029796, uc008dbb.1_5end
EntrezGene:Lrg1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrg1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A131.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A329.97
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82745.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11058.71
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31340.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91332.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21276.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41156.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G360.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7485.28
Mouse hepatocyte, donor1.CNhs13078.11714-123C4978.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C8779.33
Mouse hepatocyte, donor6.CNhs13090.11822-124F4735.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F6489.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7168.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6403.87
accessory axillary lymph node, adult.CNhs10475.1063-29H968.88
adrenal gland, adult.CNhs10508.49-24D716.92
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I17.84
adrenal gland, embryo E18.CNhs11026.1262-18F59.80
adrenal gland, neonate N00.CNhs11191.1311-23C110.00
adrenal gland, neonate N25.CNhs11223.1377-27I313.57
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H1104.69
bone (os femoris), adult.CNhs10483.56-12G2118.54
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A615.90
bone (os femoris), neonate N20.CNhs11195.1350-25C321.33
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A241.18
epididymis, adult.CNhs10490.58-23B218.95
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D26.04
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A39.52
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B2309.79
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A311.20
liver, embryo E18.CNhs10579.499-43G444.59
liver, neonate N00.CNhs11117.641-24F4116.41
liver, neonate N03.CNhs11123.1345-25G268.91
liver, neonate N06.CNhs11101.684-20A8171.08
liver, neonate N07.CNhs11103.716-20H2117.22
liver, neonate N10.CNhs11115.751-24B964.59
liver, neonate N20.CNhs11220.823-25A3231.36
liver, neonate N25.CNhs11198.1368-26H1188.91
liver, neonate N30.CNhs11106.1382-42D1168.37
lung, adult.CNhs10474.28-22B195.52
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C67.42
lung, neonate N06.CNhs11212.683-20E57.72
lung, neonate N07.CNhs11111.715-19A310.63
lung, neonate N10.CNhs11219.750-23E611.16
lung, neonate N20.CNhs11109.822-18A439.82
lung, neonate N25.CNhs11119.1359-25C787.55
lung, neonate N30.CNhs11133.1394-42H299.66
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B6133.27
mammary gland, adult pregnant day19.CNhs10476.588-5H256.02
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.61
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I717.17
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G617.16
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F87.50
skin, adult.CNhs10492.30-1C353.59
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H310.07
skin, neonate N06.CNhs11097.693-20I514.32
skin, neonate N10.CNhs11108.762-6C422.32
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G2106.62
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F244.26
spleen, neonate N10.CNhs11116.752-24D138.05
spleen, neonate N20.CNhs11112.824-19H121.60
spleen, neonate N25.CNhs11099.1354-25G327.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A95.29
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I15.44
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B412.02
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E423.76
uterus, adult pregnant day19.CNhs10497.590-15F5309.30
uterus, adult.CNhs10509.92-27E576.56
vagina, adult.CNhs10502.89-27D528.30
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C215.90
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D121.40
whole body, neonate N10.CNhs10518.761-6B413.68





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk mesenchyme1.06e-1145
exocrine gland6.61e-1025
exocrine system6.61e-1025
trunk9.29e-1090
digestive tract diverticulum1.43e-0823
sac1.43e-0823
trunk region element2.53e-0879
liver2.82e-0822
epithelial sac2.82e-0822
digestive gland2.82e-0822
epithelium of foregut-midgut junction2.82e-0822
anatomical boundary2.82e-0822
hepatobiliary system2.82e-0822
foregut-midgut junction2.82e-0822
hepatic diverticulum2.82e-0822
liver primordium2.82e-0822
septum transversum2.82e-0822
liver bud2.82e-0822
abdomen element4.13e-0849
abdominal segment element4.13e-0849
abdominal segment of trunk4.13e-0849
abdomen4.13e-0849
subdivision of trunk4.52e-0866
mesenchyme4.72e-0861
entire embryonic mesenchyme4.72e-0861
adult organism2.65e-0751
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