FFCP PHASE1:Mm9::chr7:4555644..4555655,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=545902 | |EntrezGene=545902 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q0N2,Q8BIW7,B6ZDS3 | |UniProt=E9Q0N2,Q8BIW7,B6ZDS3 | ||
|association_with_transcript=-1bp_to_ENSMUST00000166650,NM_207270,uc009exz.1_5end | |||
|cluster_id=chr7:4555644..4555655,- | |||
|description=CAGE_peak_2_at_Ptprh_5end | |||
|id=chr7:4555644..4555655,- | |||
|ontology_enrichment_celltype=CL:0002563!3.17e-16!9;CL:0002251!3.17e-16!9;CL:0000075!2.00e-13!7;CL:0000239!2.54e-12!6;CL:0000677!2.54e-12!6;CL:0000212!2.54e-12!6;CL:0000584!2.54e-12!6;CL:0000066!8.42e-12!25;CL:0002076!5.99e-09!15;CL:0000223!1.25e-07!20;CL:0000473!9.31e-07!3;CL:0000627!9.31e-07!3;CL:0000682!9.31e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.48e-15,6;CL:0000677,4.48e-15,6;CL:0000584,4.48e-15,6;CL:0000075,5.97e-13,7;CL:0002563,4.14e-10,9;CL:0002251,4.14e-10,9;CL:0000682,7.46e-08,3;CL:0000066,2.02e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.98e-27!15;UBERON:0001242!3.30e-23!13;UBERON:0000060!3.30e-23!13;UBERON:0001262!3.30e-23!13;UBERON:0004786!3.30e-23!13;UBERON:0005409!1.81e-22!59;UBERON:0000160!2.36e-20!43;UBERON:0003350!3.17e-16!9;UBERON:0004808!3.17e-16!9;UBERON:0001277!3.17e-16!9;UBERON:0000485!1.41e-15!11;UBERON:0004923!3.43e-15!24;UBERON:0001007!2.05e-08!128;UBERON:0001555!2.05e-08!128;UBERON:0007026!2.05e-08!128;UBERON:0004119!3.69e-08!130;UBERON:0000925!3.69e-08!130;UBERON:0006595!3.69e-08!130;UBERON:0004921!4.50e-07!126;UBERON:0004185!4.50e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.08e-22,15;UBERON:0000160,3.14e-19,31;UBERON:0005409,3.21e-17,47;UBERON:0001242,1.00e-14,13;UBERON:0001262,1.00e-14,13;UBERON:0004786,1.00e-14,13;UBERON:0004923,2.41e-13,24;UBERON:0001962,5.49e-11,2;UBERON:0001961,5.49e-11,2;UBERON:0001744,5.49e-11,2;UBERON:0003350,4.14e-10,9;UBERON:0004808,4.14e-10,9;UBERON:0001277,4.14e-10,9;UBERON:0000485,2.70e-08,11;UBERON:0001007,3.74e-08,116;UBERON:0001555,3.74e-08,116;UBERON:0007026,3.74e-08,116;UBERON:0004119,5.60e-08,118;UBERON:0000925,5.60e-08,118;UBERON:0006595,5.60e-08,118;UBERON:0002465,1.29e-07,3 | |||
|phase1_expression=0,5.93258192986914,4.09499315450582,4.83942738090928,6.01074875935617,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,1.60586496747019,2.29692785646008,0.86152399231815,1.939241094173,0.950117097281869,1.26015064879965,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0.494096864172033,1.00534083520108,0.596869416123452,1.16978452271472,2.69645822596266,2.37751854862164,2.58883655230677,0,0,0,0,0,0,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.436725127492355,0.674321731924103,0.991841468704031,2.09404753587224,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,5.93258192986914,4.09499315450582,4.83942738090928,6.01074875935617,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,1.60586496747019,2.29692785646008,0.86152399231815,1.939241094173,0.950117097281869,1.26015064879965,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0.494096864172033,1.00534083520108,0.596869416123452,1.16978452271472,2.69645822596266,2.37751854862164,2.58883655230677,0,0,0,0,0,0,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.436725127492355,0.674321731924103,0.991841468704031,2.09404753587224,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Ptprh | |||
}} | }} |
Latest revision as of 17:41, 26 September 2015
Short description: | p2@Ptprh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptprh_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -1bp_to_ENSMUST00000166650, NM_207270, uc009exz.1_5end |
EntrezGene: | Ptprh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.48e-15 | 6 |
gut absorptive cell | 4.48e-15 | 6 |
enterocyte | 4.48e-15 | 6 |
columnar/cuboidal epithelial cell | 5.97e-13 | 7 |
intestinal epithelial cell | 4.14e-10 | 9 |
epithelial cell of alimentary canal | 4.14e-10 | 9 |
M cell of gut | 7.46e-08 | 3 |
epithelial cell | 2.02e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.08e-22 | 15 |
intestine | 3.14e-19 | 31 |
gastrointestinal system | 3.21e-17 | 47 |
intestinal mucosa | 1.00e-14 | 13 |
wall of intestine | 1.00e-14 | 13 |
gastrointestinal system mucosa | 1.00e-14 | 13 |
organ component layer | 2.41e-13 | 24 |
gut-associated lymphoid tissue | 5.49e-11 | 2 |
mucosa-associated lymphoid tissue | 5.49e-11 | 2 |
lymphoid tissue | 5.49e-11 | 2 |
epithelium of mucosa | 4.14e-10 | 9 |
gastrointestinal system epithelium | 4.14e-10 | 9 |
intestinal epithelium | 4.14e-10 | 9 |
simple columnar epithelium | 2.70e-08 | 11 |
digestive system | 3.74e-08 | 116 |
digestive tract | 3.74e-08 | 116 |
primitive gut | 3.74e-08 | 116 |
endoderm-derived structure | 5.60e-08 | 118 |
endoderm | 5.60e-08 | 118 |
presumptive endoderm | 5.60e-08 | 118 |
lymphoid system | 1.29e-07 | 3 |