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FFCP PHASE1:Mm9::chr12:73337653..73337671,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=104001
|EntrezGene=104001
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=1bp_to_ENSMUST00000144181_5end
|association_with_transcript=1bp_to_ENSMUST00000144181_5end
|cluster_id=chr12:73337653..73337671,-
|description=CAGE_peak_2_at_Rtn1_5end
|description=CAGE_peak_2_at_Rtn1_5end
|id=chr12:73337653..73337671,-
|id=chr12:73337653..73337671,-
|ontology_enrichment_celltype=CL:0000221!2.29e-16!44;CL:0000133!2.29e-16!44;CL:0002319!2.86e-16!43;CL:0000540!4.38e-16!33;CL:0000047!4.38e-16!33;CL:0000031!4.38e-16!33;CL:0000404!4.38e-16!33;CL:0000117!2.90e-15!23;CL:0000337!2.90e-15!23;CL:0000055!3.67e-11!50;CL:0000393!5.28e-11!39;CL:0000211!5.28e-11!39
|ontology_enrichment_celltype=CL:0000221!2.29e-16!44;CL:0000133!2.29e-16!44;CL:0002319!2.86e-16!43;CL:0000540!4.38e-16!33;CL:0000047!4.38e-16!33;CL:0000031!4.38e-16!33;CL:0000404!4.38e-16!33;CL:0000117!2.90e-15!23;CL:0000337!2.90e-15!23;CL:0000055!3.67e-11!50;CL:0000393!5.28e-11!39;CL:0000211!5.28e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000221,1.89e-17,44;CL:0000133,1.89e-17,44;CL:0002319,2.40e-17,43;CL:0000540,3.79e-17,33;CL:0000047,3.79e-17,33;CL:0000031,3.79e-17,33;CL:0000404,3.79e-17,33;CL:0000117,2.88e-16,23;CL:0000337,2.88e-16,23;CL:0000393,6.11e-12,39;CL:0000211,6.11e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.93e-32!73;UBERON:0005743!1.93e-32!73;UBERON:0000073!2.46e-32!75;UBERON:0001016!2.46e-32!75;UBERON:0004121!2.15e-30!102;UBERON:0000924!2.15e-30!102;UBERON:0006601!2.15e-30!102;UBERON:0002346!3.09e-30!71;UBERON:0003075!3.09e-30!71;UBERON:0007284!3.09e-30!71;UBERON:0000033!1.49e-25!63;UBERON:0001049!2.28e-25!52;UBERON:0005068!2.28e-25!52;UBERON:0006241!2.28e-25!52;UBERON:0007135!2.28e-25!52;UBERON:0000955!2.88e-23!50;UBERON:0006238!2.88e-23!50;UBERON:0002616!9.38e-23!49;UBERON:0003056!1.83e-21!49;UBERON:0002020!1.03e-20!34;UBERON:0003080!7.52e-19!40;UBERON:0002780!3.28e-18!39;UBERON:0001890!3.28e-18!39;UBERON:0006240!3.28e-18!39;UBERON:0002791!3.71e-17!29;UBERON:0003528!3.71e-17!29;UBERON:0001893!3.71e-17!29;UBERON:0000956!3.90e-12!21;UBERON:0001869!3.90e-12!21;UBERON:0000203!3.90e-12!21;UBERON:0007811!3.11e-11!86;UBERON:0002619!6.82e-10!17;UBERON:0000153!2.82e-09!94;UBERON:0002021!1.58e-07!10;UBERON:0000411!1.58e-07!10;UBERON:0001950!1.58e-07!10;UBERON:0000468!2.40e-07!333;UBERON:0003076!4.48e-07!12;UBERON:0003057!4.48e-07!12
|ontology_enrichment_uberon=UBERON:0001017!1.93e-32!73;UBERON:0005743!1.93e-32!73;UBERON:0000073!2.46e-32!75;UBERON:0001016!2.46e-32!75;UBERON:0004121!2.15e-30!102;UBERON:0000924!2.15e-30!102;UBERON:0006601!2.15e-30!102;UBERON:0002346!3.09e-30!71;UBERON:0003075!3.09e-30!71;UBERON:0007284!3.09e-30!71;UBERON:0000033!1.49e-25!63;UBERON:0001049!2.28e-25!52;UBERON:0005068!2.28e-25!52;UBERON:0006241!2.28e-25!52;UBERON:0007135!2.28e-25!52;UBERON:0000955!2.88e-23!50;UBERON:0006238!2.88e-23!50;UBERON:0002616!9.38e-23!49;UBERON:0003056!1.83e-21!49;UBERON:0002020!1.03e-20!34;UBERON:0003080!7.52e-19!40;UBERON:0002780!3.28e-18!39;UBERON:0001890!3.28e-18!39;UBERON:0006240!3.28e-18!39;UBERON:0002791!3.71e-17!29;UBERON:0003528!3.71e-17!29;UBERON:0001893!3.71e-17!29;UBERON:0000956!3.90e-12!21;UBERON:0001869!3.90e-12!21;UBERON:0000203!3.90e-12!21;UBERON:0007811!3.11e-11!86;UBERON:0002619!6.82e-10!17;UBERON:0000153!2.82e-09!94;UBERON:0002021!1.58e-07!10;UBERON:0000411!1.58e-07!10;UBERON:0001950!1.58e-07!10;UBERON:0000468!2.40e-07!333;UBERON:0003076!4.48e-07!12;UBERON:0003057!4.48e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-34,73;UBERON:0001016,1.34e-34,75;UBERON:0002346,5.35e-31,64;UBERON:0003075,5.35e-31,64;UBERON:0007284,5.35e-31,64;UBERON:0004121,6.67e-30,95;UBERON:0000924,6.67e-30,95;UBERON:0006601,6.67e-30,95;UBERON:0000073,2.66e-28,54;UBERON:0001049,4.07e-27,52;UBERON:0005068,4.07e-27,52;UBERON:0006241,4.07e-27,52;UBERON:0007135,4.07e-27,52;UBERON:0010371,4.90e-25,73;UBERON:0010314,1.24e-23,92;UBERON:0000955,3.92e-23,47;UBERON:0006238,3.92e-23,47;UBERON:0003056,6.36e-23,49;UBERON:0002616,1.36e-22,46;UBERON:0002020,4.05e-22,34;UBERON:0003080,4.07e-20,40;UBERON:0002780,1.98e-19,39;UBERON:0001890,1.98e-19,39;UBERON:0006240,1.98e-19,39;UBERON:0003528,2.67e-18,29;UBERON:0002791,2.67e-18,29;UBERON:0001893,2.67e-18,29;UBERON:0000956,6.58e-13,21;UBERON:0001869,6.58e-13,21;UBERON:0000203,6.58e-13,21;UBERON:0002619,1.68e-10,17;UBERON:0002021,5.76e-08,10;UBERON:0000411,5.76e-08,10;UBERON:0001950,5.76e-08,10;UBERON:0003076,1.76e-07,12;UBERON:0003057,1.76e-07,12
|phase1_expression=12.6517589212787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,40.0553896611539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6478268869608,13.0815093828268,3.95435128922049,2.91644848611425,5.17949760013841,10.062679505548,0,0,0,0.257259436035947,0,0,414.546428301316,382.989468992952,354.94558596346,1.35537812827653,0,0,0,0.7104801149461,26.0652096151012,38.4218305321555,175.442824025944,197.783699655927,171.835493424079,295.363117873533,262.391826650517,200.884910712525,187.282050369634,179.247663388954,135.442533629248,147.861937502647,144.236534727613,435.09286322191,476.284672594145,342.240084455791,172.535093382853,182.897848260296,174.801195456671,287.262870836826,280.756954535831,442.512284389264,3.40767869999328,5.97015324843606,0,0,0,1.61910957491345,0,0,8.56710962803686,0,0,0,10.140726223921,0,0,0,0,0,0,5.25245846707676,0,7.42210695324124,23.9409750937267,40.7983740938269,25.8289356926786,33.9125941243401,28.4564671268406,3.76999773989026,0,0.289198713839823,0,0.485300549842228,0,0,0,85.4919927273718,99.0682923227643,1.53274233125155,0,0,0,224.835749746639,160.582711589338,286.114959760992,273.251831342259,279.752710319382,179.113294410341,165.972812118316,0.305518091550949,0,0,6.73413938836717,7.026503919986,46.9000293044285,49.517085696471,53.1988006960074,69.8734846284137,57.7792878484672,56.6895433586359,27.6812606690747,1.29340795759705,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,3.93538967817454,3.98694301967864,3.96136535214233,2.13070262026689,1.18058539048442,1.85120535464854,0.930135779001631,1.3413670069981,0.817357396570186,0.493679549740441,2.13417703302824,0.56748166682099,0.146199987425332,0.219550115291051,1.07365135008297,236.786482083207,292.454908381926,0,1.85115396664481,3.41261200856374,7.66381017139447,10.9537342123779,9.4791256572971,7.56085349072559,8.75037880117772,2.37264530772256,8.23494773620054,7.28872105520782,8.75408476981064,4.48417400373976,3.59527763461689,2.37751854862164,2.58883655230677,3.03468641524931,4.56994050438915,0,1.83286195060783,1.16371492300575,1.19230893813542,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,3.22135400009824,2.28150967018836,0.169745085775188,0.234690248288502,1.00503754465089,0.952174563544055,0.585400943573396,2.04925687338048,1.7717175171902,2.55127629851979,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,151.880858128451,150.968652330758,0,0,26.1871822115493,30.4542220551378,38.1299413987054,6.21318874676635,10.2487390077901,11.6061377623421,20.2405350837447,30.9791209385991,28.0654322342032,93.8258243951677,0,0.534196811001766,0.162886959353576,0,0,2.18502572539483,1.81394134178851,2.07465587731488,2.06711325016541,2.76691633149535,3.6179961043551,1.09060118843252,1.78248689192361,2.21225730555071,0,0,4.76615448055303,18.9064148732876,10.7367707539686,6.85878512101095,2.12808280370728,17.4801441250029,26.3278432963394,23.7482660309387,0,0.21183207086382,8.15955072803359,0,0,0.0603129249281559,0.119372344003136,0,2.62332752966866,147.042264494334,0,0.619160603889667,0,0.188368457004691,0,0,0,0,0,2.86401185404534,5.53587988766987,10.775931757723,8.4244165841005,8.57262013659322,7.64268973111622,7.68726774393478,7.19085064810423,2.35580347785627,2.46268449254406,0.621339313086926,0,0,0,0,0.258319646955462,0.337912250981556,0.58678619322877,0.13020438484395,0.838874755405687,0,0,0,1.41907650703115,0.410843828659309,0,0.716106782669926,0,0,0.295379054349154,0,0,0,0,0,0,0.680191150845634,0,0,0,4.82973985080476,0,0,1.71494703263253,0,307.789754226301,288.163598053493,293.89539839441,253.99900350397,193.193270575321,185.071504860477,220.732357575801,246.325698163649,223.852350038197,209.175165947735,9.75601067291261,74.2186264525918,58.561626773668,41.8143553357466,33.3284928578492,24.6350301323019,53.5614614001893,47.8001332794235,63.2210842895876,52.5610200468699,57.5398010750844,51.1177385156267,51.3155460934956,55.7018825922363,54.6785664457438,39.5323763764951,57.3627413427035,54.0145817298374,46.5657067907736,36.9469289537337,40.458571781479,36.7374918749829,46.4950570397276,42.5865000732723,47.1487995880806,51.0226085586809,43.7197855165926,43.1434326758062,49.5685015537395,49.9416621775387,47.8099123040422,52.9954115180531,43.3784905759871,52.0587786384846,35.6877230315112,129.152068793918,42.1076895201735,47.4865029446739,23.3371765123989,12.3531194706929,7.18790290423307
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|short_description=p2@Rtn1
|short_description=p2@Rtn1
}}
}}

Latest revision as of 18:14, 26 September 2015

Short description:p2@Rtn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rtn1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 1bp_to_ENSMUST00000144181_5end
EntrezGene:Rtn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rtn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A340.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.08
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3414.55
Mouse Granule cells, donor2.CNhs12357.11731-123E3382.99
Mouse Granule cells, donor3.CNhs12108.11636-122C7354.95
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C826.07
Mouse Microglia, donor2.CNhs12634.11736-123E838.42
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5175.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5197.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9171.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1295.36
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5262.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2200.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2187.28
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6179.25
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3135.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3147.86
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7144.24
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4435.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4476.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8342.24
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4172.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5182.90
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6174.80
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6287.26
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6280.76
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1442.51
Mouse Schwann, donor1.CNhs12507.11728-123D93.41
Mouse Schwann, donor2.CNhs12573.11746-123F95.97
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.25
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D77.42
adrenal gland, embryo E14.CNhs11038.406-44C523.94
adrenal gland, embryo E16.CNhs11004.1254-43D640.80
adrenal gland, embryo E17.CNhs11043.1263-45I125.83
adrenal gland, embryo E18.CNhs11026.1262-18F533.91
adrenal gland, neonate N00.CNhs11191.1311-23C128.46
adrenal gland, neonate N25.CNhs11223.1377-27I33.77
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B285.49
cerebellum, neonate N30.CNhs11135.1395-42I299.07
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4224.84
corpus striatum, adult.CNhs10487.19-21D8160.58
corpus striatum, neonate N00.CNhs11226.630-43F1286.11
cortex, adult.CNhs10473.12-14D5273.25
cortex, neonate N30.CNhs11107.1392-42F2279.75
diencephalon, adult.CNhs10482.20-12F2179.11
diencephalon, neonate N30.CNhs11201.1388-42B2165.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G46.73
eyeball, embryo E12.CNhs11016.345-16C67.03
eyeball, embryo E14.CNhs10521.399-16E246.90
eyeball, embryo E15.CNhs10593.426-16C949.52
eyeball, embryo E17.CNhs11023.1261-18D453.20
eyeball, neonate N00.CNhs11207.633-15C669.87
eyeball, neonate N01.CNhs11140.1532-43E757.78
eyeball, neonate N02.CNhs11205.1551-44G856.69
eyeball, neonate N16.CNhs11188.777-19A227.68
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E8236.79
hippocampus, neonate N00.CNhs11228.627-43G1292.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D57.66
intestine, embryo E15.CNhs10602.976-16D810.95
intestine, embryo E16.CNhs10585.463-22H49.48
intestine, embryo E17.CNhs10582.482-18D37.56
intestine, embryo E18.CNhs10526.1289-20F78.75
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E98.23
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F28.75
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F84.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2151.88
medulla oblongata, neonate N30.CNhs11200.1396-42A3150.97
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E126.19
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E230.45
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E338.13
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.21
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D420.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.98
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.07
olfactory brain, adult.CNhs10489.18-22I993.83
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E618.91
pituitary gland, embryo E13.CNhs11009.370-44C710.74
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F617.48
pituitary gland, embryo E17.CNhs11039.1265-44F526.33
pituitary gland, neonate N00.CNhs11190.1308-22E923.75
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F88.16
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C9147.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E35.54
stomach, embryo E15.CNhs10603.1252-16G810.78
stomach, embryo E16.CNhs11022.459-17D48.42
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C67.64
stomach, neonate N03.CNhs11193.1340-24B87.69
stomach, neonate N07.CNhs11210.718-18A97.19
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1307.79
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2288.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3293.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7254.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4193.19
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5185.07
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6220.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7246.33
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8223.85
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9209.18
whole body, embryo E11.CNhs11014.324-5I89.76
whole body, embryo E12.CNhs10587.857-27C974.22
whole body, embryo E13.CNhs10512.372-23H258.56
whole body, embryo E14.5.CNhs10578.420-27D241.81
whole body, embryo E14.CNhs10519.395-14B133.33
whole body, embryo E16.CNhs10514.453-14F224.64
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G553.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G547.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G563.22
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G552.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G557.54
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G551.12
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G551.32
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G555.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G554.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G539.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G557.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G554.01
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G546.57
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G536.95
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G540.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G536.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G546.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G542.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G547.15
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G551.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G543.72
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G543.14
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G549.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G549.94
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G547.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G553.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G543.38
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G552.06
whole body, embryo E17.5.CNhs10513.490-9F935.69
whole body, embryo E17.CNhs10517.475-3I5129.15
whole body, embryo E18.CNhs10516.493-3B342.11
whole body, neonate N00.CNhs10525.657-19C247.49
whole body, neonate N01.CNhs10576.659-23C623.34
whole body, neonate N06.CNhs10515.692-21D112.35
whole body, neonate N10.CNhs10518.761-6B47.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.89e-1744
neurectodermal cell1.89e-1744
neural cell2.40e-1743
neuron3.79e-1733
neuronal stem cell3.79e-1733
neuroblast3.79e-1733
electrically signaling cell3.79e-1733
CNS neuron (sensu Vertebrata)2.88e-1623
neuroblast (sensu Vertebrata)2.88e-1623
electrically responsive cell6.11e-1239
electrically active cell6.11e-1239

Uber anatomy
Ontology termp-valuen
central nervous system1.03e-3473
nervous system1.34e-3475
neurectoderm5.35e-3164
neural plate5.35e-3164
presumptive neural plate5.35e-3164
ectoderm-derived structure6.67e-3095
ectoderm6.67e-3095
presumptive ectoderm6.67e-3095
regional part of nervous system2.66e-2854
neural tube4.07e-2752
neural rod4.07e-2752
future spinal cord4.07e-2752
neural keel4.07e-2752
ecto-epithelium4.90e-2573
structure with developmental contribution from neural crest1.24e-2392
brain3.92e-2347
future brain3.92e-2347
pre-chordal neural plate6.36e-2349
regional part of brain1.36e-2246
gray matter4.05e-2234
anterior neural tube4.07e-2040
regional part of forebrain1.98e-1939
forebrain1.98e-1939
future forebrain1.98e-1939
brain grey matter2.67e-1829
regional part of telencephalon2.67e-1829
telencephalon2.67e-1829
cerebral cortex6.58e-1321
cerebral hemisphere6.58e-1321
pallium6.58e-1321
regional part of cerebral cortex1.68e-1017
occipital lobe5.76e-0810
visual cortex5.76e-0810
neocortex5.76e-0810
posterior neural tube1.76e-0712
chordal neural plate1.76e-0712
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