FFCP PHASE1:Mm9::chr11:102966108..102966125,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67131 | |EntrezGene=67131 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=89bp_to_ENSMUST00000150780_5end | |association_with_transcript=89bp_to_ENSMUST00000150780_5end | ||
|cluster_id=chr11:102966108..102966125,+ | |||
|description=CAGE_peak_5_at_Acbd4_5end | |description=CAGE_peak_5_at_Acbd4_5end | ||
|id=chr11:102966108..102966125,+ | |id=chr11:102966108..102966125,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.91e-11!9;CL:0002251!2.91e-11!9;CL:0000239!1.01e-08!6;CL:0000677!1.01e-08!6;CL:0000212!1.01e-08!6;CL:0000584!1.01e-08!6;CL:0000075!2.86e-07!7 | |ontology_enrichment_celltype=CL:0002563!2.91e-11!9;CL:0002251!2.91e-11!9;CL:0000239!1.01e-08!6;CL:0000677!1.01e-08!6;CL:0000212!1.01e-08!6;CL:0000584!1.01e-08!6;CL:0000075!2.86e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.04e-18,6;CL:0000677,2.04e-18,6;CL:0000584,2.04e-18,6;CL:0002563,7.27e-16,9;CL:0002251,7.27e-16,9;CL:0000075,1.08e-15,7;CL:0000066,1.10e-10,25;CL:0000682,1.65e-10,3;CL:0002076,4.02e-09,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.71e-18!15;UBERON:0005409!6.61e-17!59;UBERON:0001242!7.82e-16!13;UBERON:0000060!7.82e-16!13;UBERON:0001262!7.82e-16!13;UBERON:0004786!7.82e-16!13;UBERON:0004923!2.42e-15!24;UBERON:0000160!1.77e-14!43;UBERON:0003350!2.91e-11!9;UBERON:0004808!2.91e-11!9;UBERON:0001277!2.91e-11!9;UBERON:0001007!8.44e-11!128;UBERON:0001555!8.44e-11!128;UBERON:0007026!8.44e-11!128;UBERON:0004119!2.06e-10!130;UBERON:0000925!2.06e-10!130;UBERON:0006595!2.06e-10!130;UBERON:0004921!1.63e-09!126;UBERON:0004185!1.63e-09!126;UBERON:0000485!9.73e-09!11 | |ontology_enrichment_uberon=UBERON:0000344!2.71e-18!15;UBERON:0005409!6.61e-17!59;UBERON:0001242!7.82e-16!13;UBERON:0000060!7.82e-16!13;UBERON:0001262!7.82e-16!13;UBERON:0004786!7.82e-16!13;UBERON:0004923!2.42e-15!24;UBERON:0000160!1.77e-14!43;UBERON:0003350!2.91e-11!9;UBERON:0004808!2.91e-11!9;UBERON:0001277!2.91e-11!9;UBERON:0001007!8.44e-11!128;UBERON:0001555!8.44e-11!128;UBERON:0007026!8.44e-11!128;UBERON:0004119!2.06e-10!130;UBERON:0000925!2.06e-10!130;UBERON:0006595!2.06e-10!130;UBERON:0004921!1.63e-09!126;UBERON:0004185!1.63e-09!126;UBERON:0000485!9.73e-09!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.12e-41,31;UBERON:0000344,6.99e-32,15;UBERON:0001242,3.04e-26,13;UBERON:0001262,3.04e-26,13;UBERON:0004786,3.04e-26,13;UBERON:0005409,6.26e-26,47;UBERON:0004923,6.84e-19,24;UBERON:0003350,7.27e-16,9;UBERON:0004808,7.27e-16,9;UBERON:0001277,7.27e-16,9;UBERON:0000485,8.42e-13,11;UBERON:0002108,3.73e-12,4;UBERON:0001007,4.40e-12,116;UBERON:0001555,4.40e-12,116;UBERON:0007026,4.40e-12,116;UBERON:0004119,8.66e-12,118;UBERON:0000925,8.66e-12,118;UBERON:0006595,8.66e-12,118;UBERON:0004921,6.29e-10,114;UBERON:0000331,2.08e-09,3;UBERON:0002116,2.08e-09,3;UBERON:0001204,2.08e-09,3;UBERON:0001168,2.08e-09,3;UBERON:0001962,2.85e-07,2;UBERON:0001961,2.85e-07,2;UBERON:0001744,2.85e-07,2 | |||
|phase1_expression=0,24.4282785347553,27.2999543633722,13.0059610861937,12.0214975187123,6.04365378882803,6.30754129607919,0,0,0,0,0,0,0.0874204024189974,0,0,0.699561878128147,0,0,0,0.17008658030214,0,0,12.1594241322989,11.4704640533585,22.3950466004858,18.9535278309993,15.2984575206981,3.99049180858385,6.80481350351813,7.76056787293567,0,0,0,0.577703239502549,1.32987716286794,0.408338712524738,0,0.7813353445238,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0.608930956624282,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,11.8950761874167,6.87571473325215,0,0,0,0,0,0.570676878337677,6.64340686162316,2.14108641141214,1.50801125280162,1.79060824837036,1.55971269695296,7.19055526923377,6.05186539649144,6.17337947088538,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0.83422552858047,0.982794975566015,1.34917267430912,0.405720242777006,1.20588579876208,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15420377059036,0.161464426695906,0.120625849856312,0,0.328281799490123,7.86998258900597,0,0,0,0.370389054739423,0.188368457004691,0.27338845544205,0.686334519619568,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0.320919209591815,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,24.4282785347553,27.2999543633722,13.0059610861937,12.0214975187123,6.04365378882803,6.30754129607919,0,0,0,0,0,0,0.0874204024189974,0,0,0.699561878128147,0,0,0,0.17008658030214,0,0,12.1594241322989,11.4704640533585,22.3950466004858,18.9535278309993,15.2984575206981,3.99049180858385,6.80481350351813,7.76056787293567,0,0,0,0.577703239502549,1.32987716286794,0.408338712524738,0,0.7813353445238,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0.608930956624282,0.230615497256059,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,11.8950761874167,6.87571473325215,0,0,0,0,0,0.570676878337677,6.64340686162316,2.14108641141214,1.50801125280162,1.79060824837036,1.55971269695296,7.19055526923377,6.05186539649144,6.17337947088538,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0.83422552858047,0.982794975566015,1.34917267430912,0.405720242777006,1.20588579876208,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15420377059036,0.161464426695906,0.120625849856312,0,0.328281799490123,7.86998258900597,0,0,0,0.370389054739423,0.188368457004691,0.27338845544205,0.686334519619568,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0.320919209591815,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p5@Acbd4 | |short_description=p5@Acbd4 | ||
}} | }} |
Latest revision as of 18:59, 26 September 2015
Short description: | p5@Acbd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Acbd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 89bp_to_ENSMUST00000150780_5end |
EntrezGene: | Acbd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.04e-18 | 6 |
gut absorptive cell | 2.04e-18 | 6 |
enterocyte | 2.04e-18 | 6 |
intestinal epithelial cell | 7.27e-16 | 9 |
epithelial cell of alimentary canal | 7.27e-16 | 9 |
columnar/cuboidal epithelial cell | 1.08e-15 | 7 |
epithelial cell | 1.10e-10 | 25 |
M cell of gut | 1.65e-10 | 3 |
endo-epithelial cell | 4.02e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.12e-41 | 31 |
mucosa | 6.99e-32 | 15 |
intestinal mucosa | 3.04e-26 | 13 |
wall of intestine | 3.04e-26 | 13 |
gastrointestinal system mucosa | 3.04e-26 | 13 |
gastrointestinal system | 6.26e-26 | 47 |
organ component layer | 6.84e-19 | 24 |
epithelium of mucosa | 7.27e-16 | 9 |
gastrointestinal system epithelium | 7.27e-16 | 9 |
intestinal epithelium | 7.27e-16 | 9 |
simple columnar epithelium | 8.42e-13 | 11 |
small intestine | 3.73e-12 | 4 |
digestive system | 4.40e-12 | 116 |
digestive tract | 4.40e-12 | 116 |
primitive gut | 4.40e-12 | 116 |
endoderm-derived structure | 8.66e-12 | 118 |
endoderm | 8.66e-12 | 118 |
presumptive endoderm | 8.66e-12 | 118 |
subdivision of digestive tract | 6.29e-10 | 114 |
ileal mucosa | 2.08e-09 | 3 |
ileum | 2.08e-09 | 3 |
mucosa of small intestine | 2.08e-09 | 3 |
wall of small intestine | 2.08e-09 | 3 |
gut-associated lymphoid tissue | 2.85e-07 | 2 |
mucosa-associated lymphoid tissue | 2.85e-07 | 2 |
lymphoid tissue | 2.85e-07 | 2 |