FFCP PHASE1:Mm9::chr7:51639468..51639516,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:51639468..51639516,+
|short_description=p1@Syt3
|description=CAGE_peak_1_at_Syt3_5end
|association_with_transcript=0bp_to_ENSMUST00000118962,ENSMUST0000013...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20981 | |EntrezGene=20981 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=G3X9Y1,O35681 | |UniProt=G3X9Y1,O35681 | ||
|association_with_transcript=0bp_to_ENSMUST00000118962,ENSMUST00000132399,NM_001114116,NM_016663,uc009gph.2,uc009gpi.2_5end | |||
|cluster_id=chr7:51639468..51639516,+ | |||
|description=CAGE_peak_1_at_Syt3_5end | |||
|id=chr7:51639468..51639516,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.38e-12!23;CL:0000337!1.38e-12!23;CL:0000540!8.63e-09!33;CL:0000047!8.63e-09!33;CL:0000031!8.63e-09!33;CL:0000404!8.63e-09!33;CL:0000221!5.48e-07!44;CL:0000133!5.48e-07!44;CL:0002319!9.99e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.16e-18,23;CL:0000337,4.16e-18,23;CL:0000540,4.25e-10,33;CL:0000047,4.25e-10,33;CL:0000031,4.25e-10,33;CL:0000404,4.25e-10,33;CL:0000221,2.02e-08,44;CL:0000133,2.02e-08,44;CL:0002319,4.75e-08,43;CL:0000393,2.13e-07,39;CL:0000211,2.13e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.28e-24!52;UBERON:0005068!4.28e-24!52;UBERON:0006241!4.28e-24!52;UBERON:0007135!4.28e-24!52;UBERON:0000033!5.43e-23!63;UBERON:0001017!6.44e-23!73;UBERON:0005743!6.44e-23!73;UBERON:0000955!1.24e-22!50;UBERON:0006238!1.24e-22!50;UBERON:0002346!3.88e-22!71;UBERON:0003075!3.88e-22!71;UBERON:0007284!3.88e-22!71;UBERON:0002616!4.37e-22!49;UBERON:0000073!1.86e-21!75;UBERON:0001016!1.86e-21!75;UBERON:0004121!4.48e-21!102;UBERON:0000924!4.48e-21!102;UBERON:0006601!4.48e-21!102;UBERON:0003080!1.95e-18!40;UBERON:0002020!2.20e-18!34;UBERON:0003056!2.57e-18!49;UBERON:0002780!1.03e-17!39;UBERON:0001890!1.03e-17!39;UBERON:0006240!1.03e-17!39;UBERON:0002791!3.02e-15!29;UBERON:0003528!3.02e-15!29;UBERON:0001893!3.02e-15!29;UBERON:0004111!7.83e-12!122;UBERON:0000956!5.27e-11!21;UBERON:0001869!5.27e-11!21;UBERON:0000203!5.27e-11!21;UBERON:0007811!3.89e-10!86;UBERON:0000153!4.46e-10!94;UBERON:0000025!8.10e-10!114;UBERON:0002619!4.81e-09!17;UBERON:0000475!1.74e-08!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.55e-35,54;UBERON:0001049,2.49e-33,52;UBERON:0005068,2.49e-33,52;UBERON:0006241,2.49e-33,52;UBERON:0007135,2.49e-33,52;UBERON:0001017,3.00e-29,73;UBERON:0000955,4.14e-28,47;UBERON:0006238,4.14e-28,47;UBERON:0001016,6.44e-28,75;UBERON:0002616,2.59e-27,46;UBERON:0002020,7.92e-27,34;UBERON:0002346,1.34e-26,64;UBERON:0003075,1.34e-26,64;UBERON:0007284,1.34e-26,64;UBERON:0003080,4.93e-25,40;UBERON:0002780,5.76e-24,39;UBERON:0001890,5.76e-24,39;UBERON:0006240,5.76e-24,39;UBERON:0010371,3.45e-23,73;UBERON:0004121,9.82e-23,95;UBERON:0000924,9.82e-23,95;UBERON:0006601,9.82e-23,95;UBERON:0003528,4.16e-22,29;UBERON:0002791,4.16e-22,29;UBERON:0001893,4.16e-22,29;UBERON:0003056,9.99e-21,49;UBERON:0010314,3.92e-17,92;UBERON:0000956,9.89e-16,21;UBERON:0001869,9.89e-16,21;UBERON:0000203,9.89e-16,21;UBERON:0004111,8.43e-15,122;UBERON:0002619,8.61e-13,17;UBERON:0000025,1.26e-12,114;UBERON:0002021,3.02e-09,10;UBERON:0000411,3.02e-09,10;UBERON:0001950,3.02e-09,10;UBERON:0003076,1.65e-08,12;UBERON:0003057,1.65e-08,12;UBERON:0002420,1.61e-07,8;UBERON:0007245,1.61e-07,8;UBERON:0010009,1.61e-07,8;UBERON:0010011,1.61e-07,8;UBERON:0000454,1.61e-07,8;UBERON:0002240,5.92e-07,6;UBERON:0005174,5.92e-07,6;UBERON:0001137,5.92e-07,6 | |||
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| ||
|short_description=p1@Syt3 | |||
}} | }} |
Latest revision as of 19:11, 26 September 2015
Short description: | p1@Syt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Syt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000118962, ENSMUST00000132399, NM_001114116, NM_016663, uc009gph.2, uc009gpi.2_5end |
EntrezGene: | Syt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.16e-18 | 23 |
neuroblast (sensu Vertebrata) | 4.16e-18 | 23 |
neuron | 4.25e-10 | 33 |
neuronal stem cell | 4.25e-10 | 33 |
neuroblast | 4.25e-10 | 33 |
electrically signaling cell | 4.25e-10 | 33 |
ectodermal cell | 2.02e-08 | 44 |
neurectodermal cell | 2.02e-08 | 44 |
neural cell | 4.75e-08 | 43 |
electrically responsive cell | 2.13e-07 | 39 |
electrically active cell | 2.13e-07 | 39 |