Personal tools

FFCP PHASE1:Mm9::chr9:51856339..51856350,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr9:51856339..51856350,+ |short_description=p3@Rdx |description=CAGE_peak_3_at_Rdx_5end |association_with_transcript=293bp_to_ENSMUST00000000590,ENSMUST0000006...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:51856339..51856350,+
|DHSsupport=NA
|short_description=p3@Rdx
|DPIdataset=NA
|description=CAGE_peak_3_at_Rdx_5end
|association_with_transcript=293bp_to_ENSMUST00000000590,ENSMUST00000061352,ENSMUST00000172248,NM_001104617,NM_009041,uc009plr.2,uc009pls.2_5end
|EntrezGene=19684
|EntrezGene=19684
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P26043,Q7TSG6,Q3U111,Q3TH46
|UniProt=P26043,Q7TSG6,Q3U111,Q3TH46
|association_with_transcript=293bp_to_ENSMUST00000000590,ENSMUST00000061352,ENSMUST00000172248,NM_001104617,NM_009041,uc009plr.2,uc009pls.2_5end
|cluster_id=chr9:51856339..51856350,+
|description=CAGE_peak_3_at_Rdx_5end
|id=chr9:51856339..51856350,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!1.77e-08!193;UBERON:0004120!1.77e-08!193;UBERON:0006603!1.77e-08!193;UBERON:0009569!1.35e-07!66;UBERON:0005172!5.36e-07!49;UBERON:0005173!5.36e-07!49;UBERON:0002417!5.36e-07!49;UBERON:0000916!5.36e-07!49;UBERON:0001048!6.35e-07!147;UBERON:0003914!8.56e-07!47;UBERON:0000466!9.57e-07!79
|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.57e-07,66;UBERON:0002100,2.36e-07,90;UBERON:0005172,4.83e-07,49;UBERON:0005173,4.83e-07,49;UBERON:0002417,4.83e-07,49;UBERON:0000916,4.83e-07,49
|phase1_expression=1.44133962394315,0,0,0,0,0,0,1.29123323441576,0.563154888606667,0.70219357896598,1.36974374580404,2.07407613387875,1.71200729931206,1.83582845079895,2.99798785634096,3.64455481301687,4.89693314689703,1.26184866143295,0.959801035240171,1.69755860719212,3.74190476664707,1.19149141441062,1.56719873483361,0.319984845586813,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,2.09265815368454,3.906676722619,2.09409497589519,2.35292595212406,0.683045484958446,2.42755176515577,2.14024590558481,2.12891555560981,2.9367480345869,0.782391344348039,0.218025156380447,0.439372365468944,1.94429899074283,0.979904951377538,0,1.00669563634642,0.725362142011344,1.00828139742739,1.54355661621568,2.29226751951005,0.515672092277442,0.404632921719196,0,2.53532561402472,0,1.77858959222228,1.3498495759221,0.988866362566974,1.4209602298922,0.898800331555214,1.15265491596466,0.622137673850866,0.405017814995072,1.47227472945967,1.14260393761521,0.441737081903227,0.857435594504678,1.0543001812006,0,1.10115880999389,2.80912143787413,1.68967186581868,0.659431438650969,0.548925861614458,0.52091337055676,0.837548997004143,2.25105044012672,2.59757021220577,0.883885756421003,1.56608848879013,1.4911955666024,5.2251073399897,4.98772296704784,2.89864488701678,1.72084775396277,1.3599426674155,3.2382191498269,5.19821133958135,2.24013443548668,1.82577746171277,1.02258193546835,1.03914401841148,2.12003744706204,0.985903938436763,5.13305909657271,0,0,1.94841936910093,3.29367825117628,1.01104889002957,3.08296475241462,1.55362730188303,2.22663208597237,2.25530924795977,2.13125834818499,0.922461989024234,1.65794904607885,1.52865319276416,1.63366568728578,1.73036477414062,2.4581890676385,0,2.26473589926373,2.42925670306433,3.87900202508178,0,0.878342391034642,1.04723353406728,0,2.39630249011841,2.39961092397363,2.41433431438823,1.19832511523858,2.28750301409313,2.51308704225729,1.21677024134594,1.53429274398198,0.83115217823824,1.29793010454206,4.07357455401265,1.8661045591514,2.0217820674694,1.89397670297827,1.43132487258974,1.37941262660084,1.98068342785884,1.80845781402858,2.65342346690179,3.33095672740609,2.06143794031403,0.776110112217047,0.646703978798527,0.756424320671277,1.58356011747554,0.657587197282725,0.834141747676794,2.43776516565517,1.02891068203972,1.79130840136644,2.1066395619397,1.80143534980301,2.84163499395593,2.27838349789052,1.87620847984877,2.34080679899319,0.946978942340841,1.96764231747404,0.771335564436891,3.0229412817553,0.536546802799238,3.03589890154641,3.12663714835613,1.31333971263276,2.43206428637567,2.04679982395465,2.19550115291051,2.14730270016595,1.89260953707715,1.64647379806855,0,0,1.06644125267617,0.928946687441754,1.28867461322093,1.00841762311671,1.11189021922435,0.190225626112559,1.42358718463353,0.658795818896044,0.251335208800269,0.994782360205754,0.974820435595601,0,0.216138049874694,0.199141273254367,0.379335801906163,2.28497025219458,3.38123207019241,2.64746726198909,1.74557238450863,2.80543279561274,3.09859031908861,2.06654207171443,1.56998727841375,1.85095745882701,2.96452627087149,2.00214126859313,3.73462090715086,2.02375901146368,2.63718157805054,2.17059443777175,1.2731292589071,2.30156909960649,3.40483976227574,1.64736847912849,4.31304619582064,4.09355042435354,2.18426371180192,2.52578877947112,3.76734568396016,1.92977408545347,2.21703828199926,0.947457058852424,1.46668478797823,1.35796068620151,1.64283173801951,1.34005005953453,2.61848004974615,4.87834119644497,1.57635144106191,2.6575762757853,4.30527875375215,1.96635977658886,1.38147985492716,2.02508682014116,1.50791283939272,0.54390568381871,2.45882136509518,1.37968373152366,0.963303539926752,2.57865710502847,1.14754461763673,3.7870639080656,1.26203287766503,0.390438744296638,1.07711698866399,2.15071918157297,0.891194696329576,3.96307143104365,2.02405350837447,2.33804686329049,1.97643888973262,2.89189184779626,1.98716119291576,0.534196811001766,3.74640006513225,0.329940245945071,1.32745138339963,1.69946445308487,1.81394134178851,0.754420319023592,0.885905678642318,0.922305443831782,2.32585463851399,2.18120237686503,2.13898427030833,1.58018378967908,3.16255825724996,1.03135543248187,1.02131881726136,1.8006109403131,0.905510786479282,1.92903331528433,2.12808280370728,1.42695054081656,0.329098041204242,1.2178597964584,1.87737366450968,1.90648863777438,1.10264199027481,3.46261131177108,3.22928853391811,3.07595917133595,2.14870219205646,1.64140899745061,0.291480836629851,2.03967832211561,1.19609616558497,2.27025554759545,2.77791791054568,3.01389531207506,3.00727300986255,2.0590035588587,1.01987057996313,2.23922323717853,2.21119958087078,0,1.58167996790568,1.42323626988794,1.29606408986162,1.46361807210128,1.09181281873089,1.61837215661785,1.65306911450672,0.785267825952089,0.648074866458964,0.621339313086926,16.3470952218415,1.64468200648377,1.65458490457098,1.55560950675238,1.93739735216597,0.844780627453891,3.40335992072686,3.3853140059427,2.09718688851422,4.59009829569411,6.33666013767304,1.58005560314089,0.810900861160657,1.64337531463724,1.81889152168913,3.40150721768215,1.98681354781265,2.28371354087941,2.36303243479324,3.33189284828887,3.42930629947499,2.01652370273681,2.82627854145282,1.34696578296461,2.68816875017609,1.81384306892169,1.99787358036658,3.76798197759798,2.18250001273302,1.9318959403219,0.750729901804728,1.09890974560359,1.92931541171159,0.501572104035363,0.564751842617067,1.38097570952153,2.29158205375759,2.92150409984269,2.05524755931193,2.2661816921691,0,0.45032120322422,0.453142408984205,0.51776031175182,1.14166082342594,4.38927360741134,1.53660245178721,1.21553358534147,1.67690530102386,1.65459157605013,2.66696073361938,1.44224540067226,0.64183841918363,1.01078884705519,1.52087579934144,0.943131706930381,2.62196220915671,2.4969809437899,2.64203157195821,2.85776214769844,2.20180219295225,3.08654752741928,2.88460130562315,0.883193520806384,2.40008476669791,1.95223386775271,1.90748951957857,2.61623549938191,1.2234219453993,1.94613598150856,0.548783918618318,0.789209134313529,0.950628796921032,1.12228454331548,1.66089025373844,3.15214343601803,0.409231043169689,2.47898945897546,1.35034627686799,0.499621155875892,1.16965804222704,1.93383948643468,2.86932498103265,2.42650561031467,1.62307484934295
|phase1_expression=1.44133962394315,0,0,0,0,0,0,1.29123323441576,0.563154888606667,0.70219357896598,1.36974374580404,2.07407613387875,1.71200729931206,1.83582845079895,2.99798785634096,3.64455481301687,4.89693314689703,1.26184866143295,0.959801035240171,1.69755860719212,3.74190476664707,1.19149141441062,1.56719873483361,0.319984845586813,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,2.09265815368454,3.906676722619,2.09409497589519,2.35292595212406,0.683045484958446,2.42755176515577,2.14024590558481,2.12891555560981,2.9367480345869,0.782391344348039,0.218025156380447,0.439372365468944,1.94429899074283,0.979904951377538,0,1.00669563634642,0.725362142011344,1.00828139742739,1.54355661621568,2.29226751951005,0.515672092277442,0.404632921719196,0,2.53532561402472,0,1.77858959222228,1.3498495759221,0.988866362566974,1.4209602298922,0.898800331555214,1.15265491596466,0.622137673850866,0.405017814995072,1.47227472945967,1.14260393761521,0.441737081903227,0.857435594504678,1.0543001812006,0,1.10115880999389,2.80912143787413,1.68967186581868,0.659431438650969,0.548925861614458,0.52091337055676,0.837548997004143,2.25105044012672,2.59757021220577,0.883885756421003,1.56608848879013,1.4911955666024,5.2251073399897,4.98772296704784,2.89864488701678,1.72084775396277,1.3599426674155,3.2382191498269,5.19821133958135,2.24013443548668,1.82577746171277,1.02258193546835,1.03914401841148,2.12003744706204,0.985903938436763,5.13305909657271,0,0,1.94841936910093,3.29367825117628,1.01104889002957,3.08296475241462,1.55362730188303,2.22663208597237,2.25530924795977,2.13125834818499,0.922461989024234,1.65794904607885,1.52865319276416,1.63366568728578,1.73036477414062,2.4581890676385,0,2.26473589926373,2.42925670306433,3.87900202508178,0,0.878342391034642,1.04723353406728,0,2.39630249011841,2.39961092397363,2.41433431438823,1.19832511523858,2.28750301409313,2.51308704225729,1.21677024134594,1.53429274398198,0.83115217823824,1.29793010454206,4.07357455401265,1.8661045591514,2.0217820674694,1.89397670297827,1.43132487258974,1.37941262660084,1.98068342785884,1.80845781402858,2.65342346690179,3.33095672740609,2.06143794031403,0.776110112217047,0.646703978798527,0.756424320671277,1.58356011747554,0.657587197282725,0.834141747676794,2.43776516565517,1.02891068203972,1.79130840136644,2.1066395619397,1.80143534980301,2.84163499395593,2.27838349789052,1.87620847984877,2.34080679899319,0.946978942340841,1.96764231747404,0.771335564436891,3.0229412817553,0.536546802799238,3.03589890154641,3.12663714835613,1.31333971263276,2.43206428637567,2.04679982395465,2.19550115291051,2.14730270016595,1.89260953707715,1.64647379806855,0,0,1.06644125267617,0.928946687441754,1.28867461322093,1.00841762311671,1.11189021922435,0.190225626112559,1.42358718463353,0.658795818896044,0.251335208800269,0.994782360205754,0.974820435595601,0,0.216138049874694,0.199141273254367,0.379335801906163,2.28497025219458,3.38123207019241,2.64746726198909,1.74557238450863,2.80543279561274,3.09859031908861,2.06654207171443,1.56998727841375,1.85095745882701,2.96452627087149,2.00214126859313,3.73462090715086,2.02375901146368,2.63718157805054,2.17059443777175,1.2731292589071,2.30156909960649,3.40483976227574,1.64736847912849,4.31304619582064,4.09355042435354,2.18426371180192,2.52578877947112,3.76734568396016,1.92977408545347,2.21703828199926,0.947457058852424,1.46668478797823,1.35796068620151,1.64283173801951,1.34005005953453,2.61848004974615,4.87834119644497,1.57635144106191,2.6575762757853,4.30527875375215,1.96635977658886,1.38147985492716,2.02508682014116,1.50791283939272,0.54390568381871,2.45882136509518,1.37968373152366,0.963303539926752,2.57865710502847,1.14754461763673,3.7870639080656,1.26203287766503,0.390438744296638,1.07711698866399,2.15071918157297,0.891194696329576,3.96307143104365,2.02405350837447,2.33804686329049,1.97643888973262,2.89189184779626,1.98716119291576,0.534196811001766,3.74640006513225,0.329940245945071,1.32745138339963,1.69946445308487,1.81394134178851,0.754420319023592,0.885905678642318,0.922305443831782,2.32585463851399,2.18120237686503,2.13898427030833,1.58018378967908,3.16255825724996,1.03135543248187,1.02131881726136,1.8006109403131,0.905510786479282,1.92903331528433,2.12808280370728,1.42695054081656,0.329098041204242,1.2178597964584,1.87737366450968,1.90648863777438,1.10264199027481,3.46261131177108,3.22928853391811,3.07595917133595,2.14870219205646,1.64140899745061,0.291480836629851,2.03967832211561,1.19609616558497,2.27025554759545,2.77791791054568,3.01389531207506,3.00727300986255,2.0590035588587,1.01987057996313,2.23922323717853,2.21119958087078,0,1.58167996790568,1.42323626988794,1.29606408986162,1.46361807210128,1.09181281873089,1.61837215661785,1.65306911450672,0.785267825952089,0.648074866458964,0.621339313086926,16.3470952218415,1.64468200648377,1.65458490457098,1.55560950675238,1.93739735216597,0.844780627453891,3.40335992072686,3.3853140059427,2.09718688851422,4.59009829569411,6.33666013767304,1.58005560314089,0.810900861160657,1.64337531463724,1.81889152168913,3.40150721768215,1.98681354781265,2.28371354087941,2.36303243479324,3.33189284828887,3.42930629947499,2.01652370273681,2.82627854145282,1.34696578296461,2.68816875017609,1.81384306892169,1.99787358036658,3.76798197759798,2.18250001273302,1.9318959403219,0.750729901804728,1.09890974560359,1.92931541171159,0.501572104035363,0.564751842617067,1.38097570952153,2.29158205375759,2.92150409984269,2.05524755931193,2.2661816921691,0,0.45032120322422,0.453142408984205,0.51776031175182,1.14166082342594,4.38927360741134,1.53660245178721,1.21553358534147,1.67690530102386,1.65459157605013,2.66696073361938,1.44224540067226,0.64183841918363,1.01078884705519,1.52087579934144,0.943131706930381,2.62196220915671,2.4969809437899,2.64203157195821,2.85776214769844,2.20180219295225,3.08654752741928,2.88460130562315,0.883193520806384,2.40008476669791,1.95223386775271,1.90748951957857,2.61623549938191,1.2234219453993,1.94613598150856,0.548783918618318,0.789209134313529,0.950628796921032,1.12228454331548,1.66089025373844,3.15214343601803,0.409231043169689,2.47898945897546,1.35034627686799,0.499621155875892,1.16965804222704,1.93383948643468,2.86932498103265,2.42650561031467,1.62307484934295
|short_description=p3@Rdx
}}
}}

Latest revision as of 19:55, 26 September 2015

Short description:p3@Rdx
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rdx_5end
Coexpression cluster:NA
Association with transcript: 293bp_to_ENSMUST00000000590, ENSMUST00000061352, ENSMUST00000172248, NM_001104617, NM_009041, uc009plr.2, uc009pls.2_5end
EntrezGene:Rdx
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rdx

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.84
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D95.23
Mouse Schwann, donor2.CNhs12573.11746-123F94.99
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.08
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G12.43
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.81
kidney, neonate N10.CNhs11206.758-6D53.10
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F43.40
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I43.75
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H33.08
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G516.35
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E26.34
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C43.33
thymus, neonate N07.CNhs11211.713-19D33.43
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A22.83
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of trunk1.57e-0766
trunk2.36e-0790
abdomen element4.83e-0749
abdominal segment element4.83e-0749
abdominal segment of trunk4.83e-0749
abdomen4.83e-0749
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:51856339..51856350,%2B&oldid=4271297"