FFCP PHASE1:Mm9::chr7:52494674..52494690,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12493 | |EntrezGene=12493 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U429 | |UniProt=Q3U429 | ||
|association_with_transcript=-189bp_to_ENSMUST00000033063_5end | |association_with_transcript=-189bp_to_ENSMUST00000033063_5end | ||
|cluster_id=chr7:52494674..52494690,- | |||
|description=CAGE_peak_4_at_Cd37_5end | |description=CAGE_peak_4_at_Cd37_5end | ||
|id=chr7:52494674..52494690,- | |id=chr7:52494674..52494690,- | ||
|ontology_enrichment_celltype=CL:0000553!1.21e-08!6;CL:0000556!1.21e-08!6;CL:0000988!6.03e-07!32;CL:0002032!6.03e-07!32;CL:0000037!6.03e-07!32;CL:0000566!6.03e-07!32;CL:0000837!6.03e-07!32 | |ontology_enrichment_celltype=CL:0000553!1.21e-08!6;CL:0000556!1.21e-08!6;CL:0000988!6.03e-07!32;CL:0002032!6.03e-07!32;CL:0000037!6.03e-07!32;CL:0000566!6.03e-07!32;CL:0000837!6.03e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.52e-22,6;CL:0000556,8.52e-22,6;CL:0000050,2.44e-14,9;CL:0002027,2.78e-11,3;CL:0002006,2.78e-11,3;CL:0002024,2.78e-11,3;CL:0002031,2.91e-10,25;CL:0000763,2.98e-10,16;CL:0000839,9.79e-10,13;CL:0000988,2.03e-09,32;CL:0002032,2.03e-09,32;CL:0000037,2.03e-09,32;CL:0000837,2.03e-09,32;CL:0000049,1.73e-08,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.39e-11!48;UBERON:0002405!2.80e-09!70;UBERON:0002390!5.39e-09!45;UBERON:0003061!5.39e-09!45;UBERON:0004177!5.10e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.01e-15,6;UBERON:0004457,8.01e-15,6;UBERON:0000042,8.01e-15,6;UBERON:0004854,8.01e-15,6;UBERON:0009034,8.01e-15,6;UBERON:0002095,8.01e-15,6;UBERON:0004782,8.01e-15,6;UBERON:0003281,8.01e-15,6;UBERON:0009664,8.01e-15,6;UBERON:0002296,8.01e-15,6;UBERON:0005602,8.01e-15,6;UBERON:0001179,8.01e-15,6;UBERON:0006293,8.01e-15,6;UBERON:0002193,6.49e-14,48;UBERON:0002405,6.49e-14,48;UBERON:0003887,3.41e-12,10;UBERON:0002465,3.54e-11,3;UBERON:0002371,2.98e-10,16;UBERON:0001474,2.72e-09,22;UBERON:0004765,2.72e-09,22;UBERON:0001434,2.72e-09,22;UBERON:0002390,2.75e-09,45;UBERON:0003061,2.75e-09,45;UBERON:0001962,9.61e-08,2;UBERON:0001961,9.61e-08,2;UBERON:0001744,9.61e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0.342401459862411,0.0874204024189974,5.66286595086627,5.4668322195253,2.09868563438444,37.8554598429885,34.6899517022519,30.5560549294582,0.255129870453209,0.893618560807968,1.56719873483361,3.03985603307473,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,43.6234775750115,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,15.5362730188303,0,0,0,0,0,0,0,0,0.722996784599558,1.76922110389975,0,0.883366073841574,0.484875253135222,0,0,0.209446706813455,0.510914110417183,0.479260498023681,0,0.762421362438388,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0.823684239564244,0,0.372140947668503,0.624075346229121,0,0,0,1.10851914099963,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0.44292937929755,0.797273843287435,1.96635977658886,2.24490476425664,0.867894351489069,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,2.65490276679926,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,8.03093139749908,0,1.29636169158798,2.63715839806567,11.3456209008451,10.7525741407066,1.01987057996313,0.419854356970974,1.24379976423981,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.295379054349154,0.403865799792591,0.15241361331,0.100826185136841,0.487289403698762,0.192423683280659,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0.342401459862411,0.0874204024189974,5.66286595086627,5.4668322195253,2.09868563438444,37.8554598429885,34.6899517022519,30.5560549294582,0.255129870453209,0.893618560807968,1.56719873483361,3.03985603307473,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,43.6234775750115,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,15.5362730188303,0,0,0,0,0,0,0,0,0.722996784599558,1.76922110389975,0,0.883366073841574,0.484875253135222,0,0,0.209446706813455,0.510914110417183,0.479260498023681,0,0.762421362438388,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0.823684239564244,0,0.372140947668503,0.624075346229121,0,0,0,1.10851914099963,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0.44292937929755,0.797273843287435,1.96635977658886,2.24490476425664,0.867894351489069,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,2.65490276679926,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,8.03093139749908,0,1.29636169158798,2.63715839806567,11.3456209008451,10.7525741407066,1.01987057996313,0.419854356970974,1.24379976423981,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.405450430580328,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.295379054349154,0.403865799792591,0.15241361331,0.100826185136841,0.487289403698762,0.192423683280659,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p4@Cd37 | |short_description=p4@Cd37 | ||
}} | }} |
Latest revision as of 20:59, 26 September 2015
Short description: | p4@Cd37 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cd37_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -189bp_to_ENSMUST00000033063_5end |
EntrezGene: | Cd37 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.52e-22 | 6 |
megakaryocyte | 8.52e-22 | 6 |
megakaryocyte-erythroid progenitor cell | 2.44e-14 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 2.78e-11 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.78e-11 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.78e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 2.91e-10 | 25 |
myeloid cell | 2.98e-10 | 16 |
myeloid lineage restricted progenitor cell | 9.79e-10 | 13 |
hematopoietic cell | 2.03e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.03e-09 | 32 |
hematopoietic stem cell | 2.03e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.03e-09 | 32 |
common myeloid progenitor | 1.73e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.01e-15 | 6 |
cavity lining | 8.01e-15 | 6 |
serous membrane | 8.01e-15 | 6 |
gastrointestinal system mesentery | 8.01e-15 | 6 |
stomach region | 8.01e-15 | 6 |
mesentery | 8.01e-15 | 6 |
gastrointestinal system serosa | 8.01e-15 | 6 |
mesentery of stomach | 8.01e-15 | 6 |
gut mesentery | 8.01e-15 | 6 |
dorsal mesentery | 8.01e-15 | 6 |
dorsal mesogastrium | 8.01e-15 | 6 |
peritoneal cavity | 8.01e-15 | 6 |
spleen primordium | 8.01e-15 | 6 |
hemolymphoid system | 6.49e-14 | 48 |
immune system | 6.49e-14 | 48 |
intraembryonic coelom | 3.41e-12 | 10 |
lymphoid system | 3.54e-11 | 3 |
bone marrow | 2.98e-10 | 16 |
bone element | 2.72e-09 | 22 |
skeletal element | 2.72e-09 | 22 |
skeletal system | 2.72e-09 | 22 |
hematopoietic system | 2.75e-09 | 45 |
blood island | 2.75e-09 | 45 |
gut-associated lymphoid tissue | 9.61e-08 | 2 |
mucosa-associated lymphoid tissue | 9.61e-08 | 2 |
lymphoid tissue | 9.61e-08 | 2 |