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FFCP PHASE1:Mm9::chr12:85455249..85455260,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=105000
|EntrezGene=105000
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q05A62
|UniProt=Q05A62
|association_with_transcript=-17bp_to_ENSMUST00000110295,NM_028821,uc007oek.2,uc011yos.1_5end
|association_with_transcript=-17bp_to_ENSMUST00000110295,NM_028821,uc007oek.2,uc011yos.1_5end
|cluster_id=chr12:85455249..85455260,+
|description=CAGE_peak_2_at_Dnalc1_5end
|description=CAGE_peak_2_at_Dnalc1_5end
|id=chr12:85455249..85455260,+
|id=chr12:85455249..85455260,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,1.70e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.99e-16!63;UBERON:0001017!5.03e-15!73;UBERON:0005743!5.03e-15!73;UBERON:0000955!7.18e-15!50;UBERON:0006238!7.18e-15!50;UBERON:0000073!1.58e-14!75;UBERON:0001016!1.58e-14!75;UBERON:0002616!2.38e-14!49;UBERON:0004121!2.90e-14!102;UBERON:0000924!2.90e-14!102;UBERON:0006601!2.90e-14!102;UBERON:0001049!1.88e-13!52;UBERON:0005068!1.88e-13!52;UBERON:0006241!1.88e-13!52;UBERON:0007135!1.88e-13!52;UBERON:0002346!1.07e-12!71;UBERON:0003075!1.07e-12!71;UBERON:0007284!1.07e-12!71;UBERON:0003056!3.74e-12!49;UBERON:0003080!6.22e-12!40;UBERON:0002780!2.60e-11!39;UBERON:0001890!2.60e-11!39;UBERON:0006240!2.60e-11!39;UBERON:0000153!1.09e-09!94;UBERON:0007811!4.25e-09!86;UBERON:0004111!2.56e-08!122;UBERON:0002020!4.55e-08!34;UBERON:0000025!5.82e-08!114;UBERON:0002791!8.46e-08!29;UBERON:0003528!8.46e-08!29;UBERON:0001893!8.46e-08!29;UBERON:0002021!1.60e-07!10;UBERON:0000411!1.60e-07!10;UBERON:0001950!1.60e-07!10;UBERON:0002619!3.85e-07!17;UBERON:0000956!7.67e-07!21;UBERON:0001869!7.67e-07!21;UBERON:0000203!7.67e-07!21
|ontology_enrichment_uberon=UBERON:0000033!4.99e-16!63;UBERON:0001017!5.03e-15!73;UBERON:0005743!5.03e-15!73;UBERON:0000955!7.18e-15!50;UBERON:0006238!7.18e-15!50;UBERON:0000073!1.58e-14!75;UBERON:0001016!1.58e-14!75;UBERON:0002616!2.38e-14!49;UBERON:0004121!2.90e-14!102;UBERON:0000924!2.90e-14!102;UBERON:0006601!2.90e-14!102;UBERON:0001049!1.88e-13!52;UBERON:0005068!1.88e-13!52;UBERON:0006241!1.88e-13!52;UBERON:0007135!1.88e-13!52;UBERON:0002346!1.07e-12!71;UBERON:0003075!1.07e-12!71;UBERON:0007284!1.07e-12!71;UBERON:0003056!3.74e-12!49;UBERON:0003080!6.22e-12!40;UBERON:0002780!2.60e-11!39;UBERON:0001890!2.60e-11!39;UBERON:0006240!2.60e-11!39;UBERON:0000153!1.09e-09!94;UBERON:0007811!4.25e-09!86;UBERON:0004111!2.56e-08!122;UBERON:0002020!4.55e-08!34;UBERON:0000025!5.82e-08!114;UBERON:0002791!8.46e-08!29;UBERON:0003528!8.46e-08!29;UBERON:0001893!8.46e-08!29;UBERON:0002021!1.60e-07!10;UBERON:0000411!1.60e-07!10;UBERON:0001950!1.60e-07!10;UBERON:0002619!3.85e-07!17;UBERON:0000956!7.67e-07!21;UBERON:0001869!7.67e-07!21;UBERON:0000203!7.67e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.71e-26,54;UBERON:0001017,3.53e-23,73;UBERON:0001049,1.30e-22,52;UBERON:0005068,1.30e-22,52;UBERON:0006241,1.30e-22,52;UBERON:0007135,1.30e-22,52;UBERON:0001016,2.12e-22,75;UBERON:0002616,1.64e-21,46;UBERON:0000955,5.98e-21,47;UBERON:0006238,5.98e-21,47;UBERON:0003080,4.06e-18,40;UBERON:0002346,2.19e-17,64;UBERON:0003075,2.19e-17,64;UBERON:0007284,2.19e-17,64;UBERON:0002021,3.43e-17,10;UBERON:0000411,3.43e-17,10;UBERON:0001950,3.43e-17,10;UBERON:0002780,2.05e-16,39;UBERON:0001890,2.05e-16,39;UBERON:0006240,2.05e-16,39;UBERON:0004121,2.06e-16,95;UBERON:0000924,2.06e-16,95;UBERON:0006601,2.06e-16,95;UBERON:0010371,1.35e-14,73;UBERON:0003056,5.07e-14,49;UBERON:0002619,6.42e-12,17;UBERON:0010314,1.34e-11,92;UBERON:0000956,1.43e-11,21;UBERON:0001869,1.43e-11,21;UBERON:0000203,1.43e-11,21;UBERON:0003528,2.32e-11,29;UBERON:0002791,2.32e-11,29;UBERON:0001893,2.32e-11,29;UBERON:0002020,5.73e-11,34;UBERON:0004684,1.70e-08,3;UBERON:0002275,1.70e-08,3;UBERON:0000025,2.38e-08,114;UBERON:0004111,1.87e-07,122
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0.397163804803541,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0,0.439372365468944,0.777719596297134,0,1.43752564364972,0,0,0,0.257259436035947,0,0,0.404632921719196,0,1.26766280701236,0.338844532069132,0,0,0,0,0,0.384218305321555,0.103689612308478,0.675029691658453,0,0,0.662605622854841,0.489963196859816,0.191690942036473,0,1.10115880999389,2.80912143787413,2.15049146558741,0.395658863190582,0.274462930807229,0,0.279182999001381,0.56276261003168,1.83357897332172,0.294628585473668,1.42371680799103,0.372798891650601,0.151452386666368,0.151143120213571,0.579728977403356,0,0,0,0,0,0,0,0.519572009205738,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.79928715803342,0.258937883647172,0.593768556259299,0.346970653532272,0,0,0.301445281105245,0.352766121407114,1.0053327306374,0,0.433798070759735,0,0.161766849947409,0,0,0,0.585561594023094,1.46612694769419,0,0,0,0,2.69623150928681,1.83000241127451,0.628271760564322,2.60736480288415,3.3243009452943,2.70124457927428,1.94689515681309,0.407357455401265,0.248813941220186,0.505445516867349,0.631325567659422,0.260240885925407,0,0.180062129805349,0.90422890701429,0.272145996605311,0.896796041993948,0.187403449119458,0.517406741478031,0.431135985865684,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0,0.473489471170421,0.393528463494808,0.617068451549513,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.324275238183423,0.438599962275997,0.439100230582101,0,1.68231958851302,0.308713837137853,0.330418782983798,0,0.426576501070468,0.696710015581316,0.77320476793256,0.201683524623343,0.667134131534611,0.190225626112559,0,0,0.502670417600539,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.407302655690628,0.969762435838129,0.350679099451593,0.948548056863859,0.738050739898011,0.784993639206874,0.246794327843601,0,0.166845105716094,0,0.224862112384854,0.405720242777006,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0.482443521363367,1.10851914099963,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0,0.195133647857799,0.788175720530955,0.221464689648775,0.478364305972461,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,2.88991061978026,1.75817529888305,0.819674726883377,0.252470927204373,0,0,0.430846795465598,0.716906393857656,0.445597348164788,0.566153061577665,0,0.876767573733936,0.395287777946524,0.963963949265421,0.709700426041343,0.178065603667255,0.162886959353576,0.824850614862677,0,0.485561272309963,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,2.04263763452273,0.36012218806262,0.258717367565509,0.643011105094777,0.354680467284547,1.07021290561242,0.658196082408484,1.2178597964584,0.23467170806371,0.42366414172764,0.220528398054962,0.32977250588296,0.161464426695906,0.180938774784468,0.119372344003136,0.328281799490123,0,1.8542530201051,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.324016022465404,0,0,0.674321731924103,0.0826534557253359,0,0.129614973291793,0.621339313086926,1.12738587736838,1.04661582230785,0.496375471371293,0,0.387479470433193,0.337912250981556,0.234714477291508,0.2604087696879,0.314578033277133,0.724752362478018,0.864090018773596,0.316011120628178,0.810900861160657,0,0.25984164595559,0.179026695667481,0.596044064343795,0.120195449519969,0.147689527174577,0,0.304827226619999,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.906921534460845,0.221985953374065,0.358855426437903,0.167884616364078,0.579568782096571,0.187682475451182,0,0,0,2.25900737046827,3.68260189205742,2.86447756719698,2.23409137046794,2.74033007908257,0.755393897389701,3.37511250115903,1.35096360967266,3.62513927187364,0.51776031175182,0.31136204275253,0.798049746802062,0,0.243106717068294,0.209613162627982,0.367687016900028,0,0.206035057238894,0.320919209591815,0.252697211763798,1.2673964994512,0,0.0936415074698824,0.512201219238954,0.631790158511746,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.532427418478012,0,0.436039249896986,0.282328141245992,0.0846146078916765,0.548783918618318,0,0.271608227691724,0,0,0.394017929502254,0,0.464810523557898,0.192906610981141,0.249810577937946,0.233931608445408,0,1.14772999241306,0.441182838239031,0
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0.397163804803541,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0,0.439372365468944,0.777719596297134,0,1.43752564364972,0,0,0,0.257259436035947,0,0,0.404632921719196,0,1.26766280701236,0.338844532069132,0,0,0,0,0,0.384218305321555,0.103689612308478,0.675029691658453,0,0,0.662605622854841,0.489963196859816,0.191690942036473,0,1.10115880999389,2.80912143787413,2.15049146558741,0.395658863190582,0.274462930807229,0,0.279182999001381,0.56276261003168,1.83357897332172,0.294628585473668,1.42371680799103,0.372798891650601,0.151452386666368,0.151143120213571,0.579728977403356,0,0,0,0,0,0,0,0.519572009205738,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.79928715803342,0.258937883647172,0.593768556259299,0.346970653532272,0,0,0.301445281105245,0.352766121407114,1.0053327306374,0,0.433798070759735,0,0.161766849947409,0,0,0,0.585561594023094,1.46612694769419,0,0,0,0,2.69623150928681,1.83000241127451,0.628271760564322,2.60736480288415,3.3243009452943,2.70124457927428,1.94689515681309,0.407357455401265,0.248813941220186,0.505445516867349,0.631325567659422,0.260240885925407,0,0.180062129805349,0.90422890701429,0.272145996605311,0.896796041993948,0.187403449119458,0.517406741478031,0.431135985865684,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0,0.473489471170421,0.393528463494808,0.617068451549513,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.324275238183423,0.438599962275997,0.439100230582101,0,1.68231958851302,0.308713837137853,0.330418782983798,0,0.426576501070468,0.696710015581316,0.77320476793256,0.201683524623343,0.667134131534611,0.190225626112559,0,0,0.502670417600539,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.407302655690628,0.969762435838129,0.350679099451593,0.948548056863859,0.738050739898011,0.784993639206874,0.246794327843601,0,0.166845105716094,0,0.224862112384854,0.405720242777006,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0.482443521363367,1.10851914099963,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.167506257441816,0,0.195133647857799,0.788175720530955,0.221464689648775,0.478364305972461,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0,0,2.88991061978026,1.75817529888305,0.819674726883377,0.252470927204373,0,0,0.430846795465598,0.716906393857656,0.445597348164788,0.566153061577665,0,0.876767573733936,0.395287777946524,0.963963949265421,0.709700426041343,0.178065603667255,0.162886959353576,0.824850614862677,0,0.485561272309963,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,2.04263763452273,0.36012218806262,0.258717367565509,0.643011105094777,0.354680467284547,1.07021290561242,0.658196082408484,1.2178597964584,0.23467170806371,0.42366414172764,0.220528398054962,0.32977250588296,0.161464426695906,0.180938774784468,0.119372344003136,0.328281799490123,0,1.8542530201051,0.170870880797853,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.324016022465404,0,0,0.674321731924103,0.0826534557253359,0,0.129614973291793,0.621339313086926,1.12738587736838,1.04661582230785,0.496375471371293,0,0.387479470433193,0.337912250981556,0.234714477291508,0.2604087696879,0.314578033277133,0.724752362478018,0.864090018773596,0.316011120628178,0.810900861160657,0,0.25984164595559,0.179026695667481,0.596044064343795,0.120195449519969,0.147689527174577,0,0.304827226619999,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.906921534460845,0.221985953374065,0.358855426437903,0.167884616364078,0.579568782096571,0.187682475451182,0,0,0,2.25900737046827,3.68260189205742,2.86447756719698,2.23409137046794,2.74033007908257,0.755393897389701,3.37511250115903,1.35096360967266,3.62513927187364,0.51776031175182,0.31136204275253,0.798049746802062,0,0.243106717068294,0.209613162627982,0.367687016900028,0,0.206035057238894,0.320919209591815,0.252697211763798,1.2673964994512,0,0.0936415074698824,0.512201219238954,0.631790158511746,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.532427418478012,0,0.436039249896986,0.282328141245992,0.0846146078916765,0.548783918618318,0,0.271608227691724,0,0,0.394017929502254,0,0.464810523557898,0.192906610981141,0.249810577937946,0.233931608445408,0,1.14772999241306,0.441182838239031,0
|short_description=p2@Dnalc1
|short_description=p2@Dnalc1
}}
}}

Latest revision as of 22:06, 26 September 2015

Short description:p2@Dnalc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dnalc1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -17bp_to_ENSMUST00000110295, NM_028821, uc007oek.2, uc011yos.1_5end
EntrezGene:Dnalc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Dnalc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron1.70e-083

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.71e-2654
central nervous system3.53e-2373
neural tube1.30e-2252
neural rod1.30e-2252
future spinal cord1.30e-2252
neural keel1.30e-2252
nervous system2.12e-2275
regional part of brain1.64e-2146
brain5.98e-2147
future brain5.98e-2147
anterior neural tube4.06e-1840
neurectoderm2.19e-1764
neural plate2.19e-1764
presumptive neural plate2.19e-1764
occipital lobe3.43e-1710
visual cortex3.43e-1710
neocortex3.43e-1710
regional part of forebrain2.05e-1639
forebrain2.05e-1639
future forebrain2.05e-1639
ectoderm-derived structure2.06e-1695
ectoderm2.06e-1695
presumptive ectoderm2.06e-1695
ecto-epithelium1.35e-1473
pre-chordal neural plate5.07e-1449
regional part of cerebral cortex6.42e-1217
structure with developmental contribution from neural crest1.34e-1192
cerebral cortex1.43e-1121
cerebral hemisphere1.43e-1121
pallium1.43e-1121
brain grey matter2.32e-1129
regional part of telencephalon2.32e-1129
telencephalon2.32e-1129
gray matter5.73e-1134
raphe nuclei1.70e-083
reticular formation1.70e-083
tube2.38e-08114
anatomical conduit1.87e-07122
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