FFCP PHASE1:Mm9::chr17:8533466..8533473,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320111 | |EntrezGene=320111 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PAN7 | |UniProt=Q6PAN7 | ||
|association_with_transcript=-130bp_to_ENSMUST00000163887,NM_178774,uc012ajr.1_5end | |association_with_transcript=-130bp_to_ENSMUST00000163887,NM_178774,uc012ajr.1_5end | ||
|cluster_id=chr17:8533466..8533473,+ | |||
|description=CAGE_peak_12_at_Prr18_5end | |description=CAGE_peak_12_at_Prr18_5end | ||
|id=chr17:8533466..8533473,+ | |id=chr17:8533466..8533473,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.57e-17!23;CL:0000337!3.57e-17!23;CL:0000540!1.01e-10!33;CL:0000047!1.01e-10!33;CL:0000031!1.01e-10!33;CL:0000404!1.01e-10!33;CL:0000393!1.81e-08!39;CL:0000211!1.81e-08!39;CL:0002319!2.05e-08!43;CL:0000221!3.95e-08!44;CL:0000133!3.95e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.59e-08,3;CL:0002613,1.88e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.40e-30!52;UBERON:0005068!1.40e-30!52;UBERON:0006241!1.40e-30!52;UBERON:0007135!1.40e-30!52;UBERON:0002616!2.76e-24!49;UBERON:0000955!1.20e-23!50;UBERON:0006238!1.20e-23!50;UBERON:0002020!1.62e-23!34;UBERON:0001017!1.11e-22!73;UBERON:0005743!1.11e-22!73;UBERON:0000073!7.72e-22!75;UBERON:0001016!7.72e-22!75;UBERON:0002346!4.12e-20!71;UBERON:0003075!4.12e-20!71;UBERON:0007284!4.12e-20!71;UBERON:0003076!5.25e-18!12;UBERON:0003057!5.25e-18!12;UBERON:0000033!3.36e-17!63;UBERON:0002791!1.31e-16!29;UBERON:0003528!1.31e-16!29;UBERON:0001893!1.31e-16!29;UBERON:0003080!1.07e-15!40;UBERON:0002780!2.11e-14!39;UBERON:0001890!2.11e-14!39;UBERON:0006240!2.11e-14!39;UBERON:0004121!1.02e-13!102;UBERON:0000924!1.02e-13!102;UBERON:0006601!1.02e-13!102;UBERON:0002298!5.33e-12!6;UBERON:0003056!8.49e-12!49;UBERON:0002420!3.11e-11!8;UBERON:0007245!3.11e-11!8;UBERON:0010009!3.11e-11!8;UBERON:0010011!3.11e-11!8;UBERON:0000454!3.11e-11!8;UBERON:0000025!3.74e-11!114;UBERON:0002240!4.08e-11!6;UBERON:0005174!4.08e-11!6;UBERON:0001137!4.08e-11!6;UBERON:0007811!1.24e-10!86;UBERON:0004111!7.28e-10!122;UBERON:0001948!3.64e-09!5;UBERON:0002315!3.64e-09!5;UBERON:0000153!4.02e-09!94;UBERON:0004733!1.68e-08!6;UBERON:0004732!1.68e-08!6;UBERON:0002028!1.68e-08!6;UBERON:0007277!1.68e-08!6;UBERON:0000956!3.13e-08!21;UBERON:0001869!3.13e-08!21;UBERON:0000203!3.13e-08!21;UBERON:0002950!3.64e-08!4;UBERON:0001891!3.64e-08!4;UBERON:0009616!3.64e-08!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,3.12e-12,2;UBERON:0002298,3.12e-12,2;UBERON:0005290,3.12e-12,2;UBERON:0010096,3.12e-12,2;UBERON:0002420,8.09e-12,8;UBERON:0007245,8.09e-12,8;UBERON:0010009,8.09e-12,8;UBERON:0010011,8.09e-12,8;UBERON:0000454,8.09e-12,8;UBERON:0002038,1.59e-08,3;UBERON:0009663,1.59e-08,3;UBERON:0009661,1.59e-08,3;UBERON:0000125,1.59e-08,3;UBERON:0002308,1.59e-08,3;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.420649922702764,0.285650984403804,0.662605622854841,0.244981598429908,0,0,0,0.510749352340751,0.768032666281217,0.527545150920775,0,1.04182674111352,1.11673199600552,0.56276261003168,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.599162557619291,0.457500602818626,0.251308704225729,0,0.255715457330331,0.41557608911912,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.758091635291392,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0.526139422875686,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.420649922702764,0.285650984403804,0.662605622854841,0.244981598429908,0,0,0,0.510749352340751,0.768032666281217,0.527545150920775,0,1.04182674111352,1.11673199600552,0.56276261003168,0.15279824777681,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.599162557619291,0.457500602818626,0.251308704225729,0,0.255715457330331,0.41557608911912,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.75817529888305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.758091635291392,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0.526139422875686,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@Prr18 | |short_description=p12@Prr18 | ||
}} | }} |
Latest revision as of 23:29, 26 September 2015
Short description: | p12@Prr18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Prr18_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -130bp_to_ENSMUST00000163887, NM_178774, uc012ajr.1_5end |
EntrezGene: | Prr18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.59e-08 | 3 |
striatum neuron | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 3.12e-12 | 2 |
brainstem | 3.12e-12 | 2 |
myelencephalon | 3.12e-12 | 2 |
future myelencephalon | 3.12e-12 | 2 |
basal ganglion | 8.09e-12 | 8 |
nuclear complex of neuraxis | 8.09e-12 | 8 |
aggregate regional part of brain | 8.09e-12 | 8 |
collection of basal ganglia | 8.09e-12 | 8 |
cerebral subcortex | 8.09e-12 | 8 |
substantia nigra | 1.59e-08 | 3 |
telencephalic nucleus | 1.59e-08 | 3 |
midbrain nucleus | 1.59e-08 | 3 |
neural nucleus | 1.59e-08 | 3 |
nucleus of brain | 1.59e-08 | 3 |
posterior neural tube | 2.25e-08 | 12 |
chordal neural plate | 2.25e-08 | 12 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |