FFCP PHASE1:Mm9::chr1:189821700..189821713,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26381 | |EntrezGene=26381 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P62509 | |UniProt=P62509 | ||
|association_with_transcript=0bp_to_ENSMUST00000027906,NM_011935_5end | |association_with_transcript=0bp_to_ENSMUST00000027906,NM_011935_5end | ||
|cluster_id=chr1:189821700..189821713,+ | |||
|description=CAGE_peak_4_at_Esrrg_5end | |description=CAGE_peak_4_at_Esrrg_5end | ||
|id=chr1:189821700..189821713,+ | |id=chr1:189821700..189821713,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.87e-09!23;CL:0000337!4.87e-09!23 | |ontology_enrichment_celltype=CL:0000117!4.87e-09!23;CL:0000337!4.87e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.35e-17,23;CL:0000337,3.35e-17,23;CL:0000540,2.01e-10,33;CL:0000047,2.01e-10,33;CL:0000031,2.01e-10,33;CL:0000404,2.01e-10,33;CL:0000393,4.48e-08,39;CL:0000211,4.48e-08,39;CL:0002319,6.79e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.89e-07!63;UBERON:0002346!3.32e-07!71;UBERON:0003075!3.32e-07!71;UBERON:0007284!3.32e-07!71 | |ontology_enrichment_uberon=UBERON:0000033!2.89e-07!63;UBERON:0002346!3.32e-07!71;UBERON:0003075!3.32e-07!71;UBERON:0007284!3.32e-07!71 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.06e-11,92;UBERON:0000073,2.97e-10,54;UBERON:0002346,1.34e-09,64;UBERON:0003075,1.34e-09,64;UBERON:0007284,1.34e-09,64;UBERON:0001017,3.46e-09,73;UBERON:0004121,5.63e-09,95;UBERON:0000924,5.63e-09,95;UBERON:0006601,5.63e-09,95;UBERON:0001016,9.67e-09,75;UBERON:0002020,3.86e-08,34;UBERON:0001049,7.61e-08,52;UBERON:0005068,7.61e-08,52;UBERON:0006241,7.61e-08,52;UBERON:0007135,7.61e-08,52;UBERON:0010371,1.49e-07,73 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,1.44425809875637,1.82858109894342,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,0,0,0,1.71390590642282,0.441737081903227,4.28717797252339,4.79227355091182,3.67687514644008,2.20231761998777,1.65993539510744,1.68967186581868,2.37395317914349,3.56801810049398,3.12548022334056,1.11673199600552,0,1.83357897332172,2.06240009831567,2.13557521198654,1.86399445825301,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,0,0,0.173485326766136,0.608930956624282,0,0.452167921657868,0.117588707135705,0.879666139307728,0,0,0,0.323533699894818,0.220841518460394,0,7.45567044872489,3.22058876712702,6.49284791121711,0,0,0,0,0.898743836428936,0.457500602818626,1.50785222535437,0,0,1.24672826735736,1.1356888414743,0.203678727700633,0.124406970610093,0.252722758433675,0.841767423545896,0.260240885925407,0.229902104433473,0.720248519221397,1.05493372485001,1.42876648217788,3.84341160854549,3.5606655332697,5.43277078551933,0,0.567318240503458,0.175951124163949,0,0,0,0,0,0,0,0,2.69263504296152,3.98694301967864,1.98068267607116,3.31442629819294,2.16440654922144,1.69693824176116,2.32533944750408,1.60964040839772,1.05088808130453,0.493679549740441,0.164167464079095,0.405344047729279,0.292399974850665,0.219550115291051,0.536825675041487,0,0,0,1.05780226665418,0.213288250535234,0.232236671860439,0.77320476793256,1.81515172161008,0.889512175379481,0.190225626112559,1.42358718463353,1.15289268306808,0.251335208800269,0.795825888164603,0.58489226135736,0.898819408654221,0,0.597423819763102,0,0.456994050438915,0,0.203651327845314,0,0.210407459670956,0.189709611372772,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0.678980343100753,0,0.335012514883631,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.642202359951168,2.10981035865966,0,0,0,0,0.215423397732799,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0.565815239267694,0.590603785761546,0.307435147943927,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0.484393280087717,0.301564624640779,0,0.164140899745061,0.291480836629851,0.370850604021019,0,0,0,0,0,0.228778173206523,0,0,0,1.90934123603023,0.632671987162271,1.42323626988794,2.05210147561422,2.29997125615916,1.9652630737156,4.98998081623837,5.12451425497083,9.94672579539312,0.648074866458964,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,1.54667864109319,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0,1.03552062350364,0.415149390336707,0.798049746802062,0.853668028770671,1.45864030240976,0.209613162627982,0.551530525350042,1.33348036680969,0.412070114477788,1.28367683836726,0.758091635291392,0.50695859978048,0.565879024158229,0.655490552289177,0.89635213366817,0.804096565378586,0.952587382566147,0.811190281613988,0.964546102318525,0.824171801606613,0.883193520806384,1.02860775715625,0.354951612318675,0.715308569841963,0.581385666529314,1.03520318456864,0.930760686808441,0.548783918618318,0.263069711437843,0.135804113845862,0,0.711810108745045,0.394017929502254,1.22769312950907,0.929621047115796,0.578719832943424,0.249810577937946,0,0.429742108096597,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,1.44425809875637,1.82858109894342,2.04169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0,0,0,0,1.71390590642282,0.441737081903227,4.28717797252339,4.79227355091182,3.67687514644008,2.20231761998777,1.65993539510744,1.68967186581868,2.37395317914349,3.56801810049398,3.12548022334056,1.11673199600552,0,1.83357897332172,2.06240009831567,2.13557521198654,1.86399445825301,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,0,0,0.173485326766136,0.608930956624282,0,0.452167921657868,0.117588707135705,0.879666139307728,0,0,0,0.323533699894818,0.220841518460394,0,7.45567044872489,3.22058876712702,6.49284791121711,0,0,0,0,0.898743836428936,0.457500602818626,1.50785222535437,0,0,1.24672826735736,1.1356888414743,0.203678727700633,0.124406970610093,0.252722758433675,0.841767423545896,0.260240885925407,0.229902104433473,0.720248519221397,1.05493372485001,1.42876648217788,3.84341160854549,3.5606655332697,5.43277078551933,0,0.567318240503458,0.175951124163949,0,0,0,0,0,0,0,0,2.69263504296152,3.98694301967864,1.98068267607116,3.31442629819294,2.16440654922144,1.69693824176116,2.32533944750408,1.60964040839772,1.05088808130453,0.493679549740441,0.164167464079095,0.405344047729279,0.292399974850665,0.219550115291051,0.536825675041487,0,0,0,1.05780226665418,0.213288250535234,0.232236671860439,0.77320476793256,1.81515172161008,0.889512175379481,0.190225626112559,1.42358718463353,1.15289268306808,0.251335208800269,0.795825888164603,0.58489226135736,0.898819408654221,0,0.597423819763102,0,0.456994050438915,0,0.203651327845314,0,0.210407459670956,0.189709611372772,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0.678980343100753,0,0.335012514883631,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.642202359951168,2.10981035865966,0,0,0,0,0.215423397732799,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0.565815239267694,0.590603785761546,0.307435147943927,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0.484393280087717,0.301564624640779,0,0.164140899745061,0.291480836629851,0.370850604021019,0,0,0,0,0,0.228778173206523,0,0,0,1.90934123603023,0.632671987162271,1.42323626988794,2.05210147561422,2.29997125615916,1.9652630737156,4.98998081623837,5.12451425497083,9.94672579539312,0.648074866458964,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,1.54667864109319,0.685082519770642,0.755393897389701,0.675022500231806,1.35096360967266,0,1.03552062350364,0.415149390336707,0.798049746802062,0.853668028770671,1.45864030240976,0.209613162627982,0.551530525350042,1.33348036680969,0.412070114477788,1.28367683836726,0.758091635291392,0.50695859978048,0.565879024158229,0.655490552289177,0.89635213366817,0.804096565378586,0.952587382566147,0.811190281613988,0.964546102318525,0.824171801606613,0.883193520806384,1.02860775715625,0.354951612318675,0.715308569841963,0.581385666529314,1.03520318456864,0.930760686808441,0.548783918618318,0.263069711437843,0.135804113845862,0,0.711810108745045,0.394017929502254,1.22769312950907,0.929621047115796,0.578719832943424,0.249810577937946,0,0.429742108096597,0.191288332068843,0,0 | ||
|short_description=p4@Esrrg | |short_description=p4@Esrrg | ||
}} | }} |
Latest revision as of 23:33, 26 September 2015
Short description: | p4@Esrrg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Esrrg_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000027906, NM_011935_5end |
EntrezGene: | Esrrg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.35e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.35e-17 | 23 |
neuron | 2.01e-10 | 33 |
neuronal stem cell | 2.01e-10 | 33 |
neuroblast | 2.01e-10 | 33 |
electrically signaling cell | 2.01e-10 | 33 |
electrically responsive cell | 4.48e-08 | 39 |
electrically active cell | 4.48e-08 | 39 |
neural cell | 6.79e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.06e-11 | 92 |
regional part of nervous system | 2.97e-10 | 54 |
neurectoderm | 1.34e-09 | 64 |
neural plate | 1.34e-09 | 64 |
presumptive neural plate | 1.34e-09 | 64 |
central nervous system | 3.46e-09 | 73 |
ectoderm-derived structure | 5.63e-09 | 95 |
ectoderm | 5.63e-09 | 95 |
presumptive ectoderm | 5.63e-09 | 95 |
nervous system | 9.67e-09 | 75 |
gray matter | 3.86e-08 | 34 |
neural tube | 7.61e-08 | 52 |
neural rod | 7.61e-08 | 52 |
future spinal cord | 7.61e-08 | 52 |
neural keel | 7.61e-08 | 52 |
ecto-epithelium | 1.49e-07 | 73 |