FFCP PHASE1:Mm9::chr1:192803074..192803111,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=226841|HGNC=|MCL_coexpression_id=108|UniProt=Q8C5G2|association_with_transcript=63bp_to_ENSMUST00000166139,NR_027352,uc007ebs.2_5end|description=CAGE_peak_1_at_Vash2_5end|id=chr1:192803074..192803111,-|ontology_enrichment_celltype=CL:0000540!8.78e-12!33;CL:0000047!8.78e-12!33;CL:0000031!8.78e-12!33;CL:0000404!8.78e-12!33;CL:0000393!1.73e-10!39;CL:0000211!1.73e-10!39;CL:0000117!1.00e-09!23;CL:0000337!1.00e-09!23;CL:0000221!1.15e-08!44;CL:0000133!1.15e-08!44;CL:0002319!2.10e-08!43;CL:0000055!3.82e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,3.84e-12,33;CL:0000047,3.84e-12,33;CL:0000031,3.84e-12,33;CL:0000404,3.84e-12,33;CL:0000393,8.41e-11,39;CL:0000211,8.41e-11,39;CL:0000117,5.18e-10,23;CL:0000337,5.18e-10,23;CL:0000221,1.17e-08,44;CL:0000133,1.17e-08,44;CL:0002319,2.18e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=21.2997966649376,0,0.454999239389536,0,0,4.53274034162102,2.33612640595526,0.129123323441576,0.140788722151667,0,0,0,0,0,0,0,0,0.315462165358238,0.411343300817216,0,4.5072943780067,0.297872853602656,0,2.23989391910769,1.60586496747019,0.57423196411502,0.430761996159075,0.861884930743556,0.190023419456374,0,0.886922042621219,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,0,0,0,0,0,0,4.78407908307194,4.25783111121961,5.87349606917381,0.782391344348039,1.09012578190223,0.439372365468944,0.194429899074283,2.09979632438044,1.43752564364972,0,0,0,3.34437266846731,1.14613375975503,1.03134418455488,42.6887732413751,38.0873505075864,30.4239073682966,6.43804610931351,5.33576877666684,0.899899717281399,1.97773272513395,2.1314403448383,5.69240209984969,3.07374644257244,36.6024331448926,47.9271081077502,35.7552434297349,16.8534080798244,10.6016899656774,38.8295833511404,34.4085240955469,28.4957823849107,4.40463523997555,5.61824287574826,6.45147439676223,49.5892441865529,42.8162172059277,49.4867702028922,5.30447698102624,2.8138130501584,1.98637722109853,18.2669722993674,17.5117167382897,46.7862609021504,2.42323818666189,4.98772296704784,0.289864488701678,0,0,0.539703191637817,0,0,1.12355536105401,10.0553890321054,7.53379413348319,5.3000936176551,13.5209682985613,11.5493829672886,17.8363667794652,28.4426681261332,1.29894624606728,1.26679932737549,0,1.1418387971906,2.33044095282455,0.148442139064825,8.84775166507293,3.34912026143355,2.7673859670727,2.11011696773672,2.82212897125692,0.251333182659351,0.988779870937496,0.144599356919912,0,8.7354098971601,2.20841518460394,1.45462575940567,0,0.878342391034642,0.41889341362691,0.766371165625774,0.599075622529601,0,0.127070227073065,2.54644086988199,0.915001205637253,30.9109706197646,1.39059456153821,1.27857728665165,3.1168206683934,3.89379031362618,7.43427356107309,3.73220911830279,14.4051972307195,1.05220927943237,14.3132487258974,14.4838325793088,17.2859644613135,14.1662528765572,15.9205408014107,12.1708034270607,11.9938207436453,2.84573707812917,17.2454394346274,24.016472181313,18.4748680372146,17.535658594206,11.6779844674751,15.6713474934975,10.0833246839892,11.1459189418356,0,0,0,28.9976081549703,22.9835538781474,26.6491850962302,23.4377288229358,27.3502282128891,27.6138132068407,28.8342091490506,28.7052539497593,12.2603609485528,12.8356682932515,4.92502392237286,1.05389452409612,0.438599962275997,0.658650345873152,0.268412837520744,0.210289948564127,34.4730451470603,0.330418782983798,0,14.0770245353254,13.237490296045,7.60318021800351,4.43703754171354,4.22518283305254,2.85338439168839,0.474529061544512,2.47048432086016,2.26201687920243,1.1937388322469,1.36474860983384,0,0.648414149624083,0.796565093017469,10.4317345524195,9.82537208443668,5.63538678365402,6.92414514674068,3.87904974335251,4.83937157243198,2.33975187359752,0.295220295959204,0.470996183524124,0.123397163921801,0,2.33583148002532,0.982794975566015,0.449724224769707,0.608580364165509,0.964708639009667,0.50925170356284,0,0.486405680325106,0.823684239564244,2.87536413054709,1.11642284300551,0.312037673114561,0.252578877947112,0,0,0.184753190166605,19.7071068241304,9.4519686336375,7.1292936025579,3.98973422090454,3.1826188913945,2.38043640886014,2.34160377429359,4.88668946729192,4.4292937929755,5.58091690301205,1.14704320301017,0.690739927463582,0.433947175744535,1.50791283939272,1.08781136763742,0,0,1.9266070798535,4.80567915028033,13.9344703570174,3.02965112645248,11.3582958989852,10.1514073517126,6.24727853425117,9.08081432219698,11.5855310522845,12.1722908239198,14.9779959619711,12.2747460322751,10.6727700045561,4.17717711348349,0.567760340833074,8.19101776869374,7.81857404897165,5.44401405809367,0,11.4106898992841,5.44182402536552,2.45186603682668,2.65771703592696,3.68922177532713,2.58428293168221,3.63533729477506,2.49548164869305,0,0,1.03135543248187,0.340439605753788,9.90336017172206,7.63216234318252,7.07312215604255,6.38424841112185,5.35106452806212,4.44282355625727,3.65357938937519,13.1416156515678,4.66030555900404,0,1.15420377059036,8.23468576149118,7.05661221659424,2.86493625607528,1.31312719796049,0.582961673259701,2.59595422814714,0,5.15967169908056,2.03713980106683,0.941842285023455,0,0.228778173206523,0.509935289981566,1.25956307091292,0.829199842826543,0,14.0769517143605,9.14937602070819,5.07625101862466,3.3454127362315,3.27543845619266,3.64133735239016,2.47960367176008,1.57053565190418,0.648074866458964,0.621339313086926,23.675103424736,6.72824457197905,7.1147150896552,3.88902376688095,6.32883135040882,3.37912250981556,3.28600268208111,2.73429208172295,1.36317147753424,0.724752362478018,14.6895303191511,0.316011120628178,13.582589424441,14.6876668745703,6.75588279484534,5.90788095702689,2.78153896693771,2.28371354087941,1.9199638532695,1.51449674922221,1.143102099825,0.806609481094724,0.877120926657772,0.673482891482306,0.467507608726276,1.58711268530648,0.443971906748129,2.06341870201794,1.34307693091263,0.19318959403219,1.12609485270709,2.56412273974171,0.214368379079066,0.501572104035363,0,1.84130094602871,3.43737308063638,0.859265911718438,0,1.5107877947794,0,2.2516060161211,0.453142408984205,0.51776031175182,22.7294291209347,18.7541690498485,18.4392294214465,21.6364978190782,20.7517031001702,23.7158125900518,16.2240111295179,14.6284890639615,19.2551525755089,16.172621552883,17.4900716924265,13.0152175556393,17.8855279267475,19.3996211786754,19.7003658517754,18.5754539600399,20.3956413662946,16.7831021803423,26.3734976514116,16.6334779751869,15.4291163573437,15.4403951358624,16.2136609164178,16.7148379127178,19.1983136047274,17.261380009902,15.5488776941857,10.2597187460759,18.8767718245748,7.85599180320834,17.4393476642536,19.3068785456104,12.2769312950907,17.3529262128282,15.8183421004536,24.9810577937946,12.3983752476066,11.1732948105115,11.8598765882683,5.51478547798789,4.17362104116759|short_description=p1@Vash2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=226841 | |||
|HGNC= | |||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C5G2 | |||
|association_with_transcript=63bp_to_ENSMUST00000166139,NR_027352,uc007ebs.2_5end | |||
|cluster_id=chr1:192803074..192803111,- | |||
|description=CAGE_peak_1_at_Vash2_5end | |||
|id=chr1:192803074..192803111,- | |||
|ontology_enrichment_celltype=CL:0000540!8.78e-12!33;CL:0000047!8.78e-12!33;CL:0000031!8.78e-12!33;CL:0000404!8.78e-12!33;CL:0000393!1.73e-10!39;CL:0000211!1.73e-10!39;CL:0000117!1.00e-09!23;CL:0000337!1.00e-09!23;CL:0000221!1.15e-08!44;CL:0000133!1.15e-08!44;CL:0002319!2.10e-08!43;CL:0000055!3.82e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.84e-12,33;CL:0000047,3.84e-12,33;CL:0000031,3.84e-12,33;CL:0000404,3.84e-12,33;CL:0000393,8.41e-11,39;CL:0000211,8.41e-11,39;CL:0000117,5.18e-10,23;CL:0000337,5.18e-10,23;CL:0000221,1.17e-08,44;CL:0000133,1.17e-08,44;CL:0002319,2.18e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=21.2997966649376,0,0.454999239389536,0,0,4.53274034162102,2.33612640595526,0.129123323441576,0.140788722151667,0,0,0,0,0,0,0,0,0.315462165358238,0.411343300817216,0,4.5072943780067,0.297872853602656,0,2.23989391910769,1.60586496747019,0.57423196411502,0.430761996159075,0.861884930743556,0.190023419456374,0,0.886922042621219,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,0,0,0,0,0,0,4.78407908307194,4.25783111121961,5.87349606917381,0.782391344348039,1.09012578190223,0.439372365468944,0.194429899074283,2.09979632438044,1.43752564364972,0,0,0,3.34437266846731,1.14613375975503,1.03134418455488,42.6887732413751,38.0873505075864,30.4239073682966,6.43804610931351,5.33576877666684,0.899899717281399,1.97773272513395,2.1314403448383,5.69240209984969,3.07374644257244,36.6024331448926,47.9271081077502,35.7552434297349,16.8534080798244,10.6016899656774,38.8295833511404,34.4085240955469,28.4957823849107,4.40463523997555,5.61824287574826,6.45147439676223,49.5892441865529,42.8162172059277,49.4867702028922,5.30447698102624,2.8138130501584,1.98637722109853,18.2669722993674,17.5117167382897,46.7862609021504,2.42323818666189,4.98772296704784,0.289864488701678,0,0,0.539703191637817,0,0,1.12355536105401,10.0553890321054,7.53379413348319,5.3000936176551,13.5209682985613,11.5493829672886,17.8363667794652,28.4426681261332,1.29894624606728,1.26679932737549,0,1.1418387971906,2.33044095282455,0.148442139064825,8.84775166507293,3.34912026143355,2.7673859670727,2.11011696773672,2.82212897125692,0.251333182659351,0.988779870937496,0.144599356919912,0,8.7354098971601,2.20841518460394,1.45462575940567,0,0.878342391034642,0.41889341362691,0.766371165625774,0.599075622529601,0,0.127070227073065,2.54644086988199,0.915001205637253,30.9109706197646,1.39059456153821,1.27857728665165,3.1168206683934,3.89379031362618,7.43427356107309,3.73220911830279,14.4051972307195,1.05220927943237,14.3132487258974,14.4838325793088,17.2859644613135,14.1662528765572,15.9205408014107,12.1708034270607,11.9938207436453,2.84573707812917,17.2454394346274,24.016472181313,18.4748680372146,17.535658594206,11.6779844674751,15.6713474934975,10.0833246839892,11.1459189418356,0,0,0,28.9976081549703,22.9835538781474,26.6491850962302,23.4377288229358,27.3502282128891,27.6138132068407,28.8342091490506,28.7052539497593,12.2603609485528,12.8356682932515,4.92502392237286,1.05389452409612,0.438599962275997,0.658650345873152,0.268412837520744,0.210289948564127,34.4730451470603,0.330418782983798,0,14.0770245353254,13.237490296045,7.60318021800351,4.43703754171354,4.22518283305254,2.85338439168839,0.474529061544512,2.47048432086016,2.26201687920243,1.1937388322469,1.36474860983384,0,0.648414149624083,0.796565093017469,10.4317345524195,9.82537208443668,5.63538678365402,6.92414514674068,3.87904974335251,4.83937157243198,2.33975187359752,0.295220295959204,0.470996183524124,0.123397163921801,0,2.33583148002532,0.982794975566015,0.449724224769707,0.608580364165509,0.964708639009667,0.50925170356284,0,0.486405680325106,0.823684239564244,2.87536413054709,1.11642284300551,0.312037673114561,0.252578877947112,0,0,0.184753190166605,19.7071068241304,9.4519686336375,7.1292936025579,3.98973422090454,3.1826188913945,2.38043640886014,2.34160377429359,4.88668946729192,4.4292937929755,5.58091690301205,1.14704320301017,0.690739927463582,0.433947175744535,1.50791283939272,1.08781136763742,0,0,1.9266070798535,4.80567915028033,13.9344703570174,3.02965112645248,11.3582958989852,10.1514073517126,6.24727853425117,9.08081432219698,11.5855310522845,12.1722908239198,14.9779959619711,12.2747460322751,10.6727700045561,4.17717711348349,0.567760340833074,8.19101776869374,7.81857404897165,5.44401405809367,0,11.4106898992841,5.44182402536552,2.45186603682668,2.65771703592696,3.68922177532713,2.58428293168221,3.63533729477506,2.49548164869305,0,0,1.03135543248187,0.340439605753788,9.90336017172206,7.63216234318252,7.07312215604255,6.38424841112185,5.35106452806212,4.44282355625727,3.65357938937519,13.1416156515678,4.66030555900404,0,1.15420377059036,8.23468576149118,7.05661221659424,2.86493625607528,1.31312719796049,0.582961673259701,2.59595422814714,0,5.15967169908056,2.03713980106683,0.941842285023455,0,0.228778173206523,0.509935289981566,1.25956307091292,0.829199842826543,0,14.0769517143605,9.14937602070819,5.07625101862466,3.3454127362315,3.27543845619266,3.64133735239016,2.47960367176008,1.57053565190418,0.648074866458964,0.621339313086926,23.675103424736,6.72824457197905,7.1147150896552,3.88902376688095,6.32883135040882,3.37912250981556,3.28600268208111,2.73429208172295,1.36317147753424,0.724752362478018,14.6895303191511,0.316011120628178,13.582589424441,14.6876668745703,6.75588279484534,5.90788095702689,2.78153896693771,2.28371354087941,1.9199638532695,1.51449674922221,1.143102099825,0.806609481094724,0.877120926657772,0.673482891482306,0.467507608726276,1.58711268530648,0.443971906748129,2.06341870201794,1.34307693091263,0.19318959403219,1.12609485270709,2.56412273974171,0.214368379079066,0.501572104035363,0,1.84130094602871,3.43737308063638,0.859265911718438,0,1.5107877947794,0,2.2516060161211,0.453142408984205,0.51776031175182,22.7294291209347,18.7541690498485,18.4392294214465,21.6364978190782,20.7517031001702,23.7158125900518,16.2240111295179,14.6284890639615,19.2551525755089,16.172621552883,17.4900716924265,13.0152175556393,17.8855279267475,19.3996211786754,19.7003658517754,18.5754539600399,20.3956413662946,16.7831021803423,26.3734976514116,16.6334779751869,15.4291163573437,15.4403951358624,16.2136609164178,16.7148379127178,19.1983136047274,17.261380009902,15.5488776941857,10.2597187460759,18.8767718245748,7.85599180320834,17.4393476642536,19.3068785456104,12.2769312950907,17.3529262128282,15.8183421004536,24.9810577937946,12.3983752476066,11.1732948105115,11.8598765882683,5.51478547798789,4.17362104116759 | |||
|short_description=p1@Vash2 | |||
}} |
Latest revision as of 23:56, 26 September 2015
Short description: | p1@Vash2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Vash2_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 63bp_to_ENSMUST00000166139, NR_027352, uc007ebs.2_5end |
EntrezGene: | Vash2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.84e-12 | 33 |
neuronal stem cell | 3.84e-12 | 33 |
neuroblast | 3.84e-12 | 33 |
electrically signaling cell | 3.84e-12 | 33 |
electrically responsive cell | 8.41e-11 | 39 |
electrically active cell | 8.41e-11 | 39 |
CNS neuron (sensu Vertebrata) | 5.18e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.18e-10 | 23 |
ectodermal cell | 1.17e-08 | 44 |
neurectodermal cell | 1.17e-08 | 44 |
neural cell | 2.18e-08 | 43 |