FFCP PHASE1:Mm9::chr12:92639464..92639478,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:92639464..92639478,+ to FFCP PHASE1:Mm9::chr12:92639464..92639478,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22095 | |EntrezGene=22095 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=106 | |||
|TSSclassifier=NA | |||
|UniProt=Q78U67,P47750 | |UniProt=Q78U67,P47750 | ||
|association_with_transcript=31bp_to_ENSMUST00000021343,ENSMUST00000021346,NM_001113404,NM_011648,uc007okp.2,uc007okq.2_5end | |||
|cluster_id=chr12:92639464..92639478,+ | |||
|description=CAGE_peak_2_at_Tshr_5end | |||
|id=chr12:92639464..92639478,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.79e-08!9;UBERON:0000019!1.79e-08!9;UBERON:0000047!1.79e-08!9;UBERON:0004088!1.79e-08!9;UBERON:0002104!1.79e-08!9;UBERON:0001456!1.79e-08!9;UBERON:0003072!1.79e-08!9;UBERON:0003071!1.79e-08!9;UBERON:0004128!1.79e-08!9;UBERON:0003102!3.24e-08!23;UBERON:0005085!7.07e-08!13;UBERON:0001444!1.15e-07!11;UBERON:0003100!3.48e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005085,7.06e-19,13;UBERON:0000970,1.26e-18,9;UBERON:0000019,1.26e-18,9;UBERON:0000047,1.26e-18,9;UBERON:0010312,1.26e-18,9;UBERON:0004088,1.26e-18,9;UBERON:0002104,1.26e-18,9;UBERON:0001456,1.26e-18,9;UBERON:0003072,1.26e-18,9;UBERON:0004128,1.26e-18,9;UBERON:0003071,1.26e-18,9;UBERON:0001444,6.62e-15,11;UBERON:0000020,1.64e-13,12;UBERON:0001032,1.64e-13,12;UBERON:0004456,1.64e-13,12;UBERON:0000033,2.48e-12,13;UBERON:0000014,4.08e-12,5;UBERON:0001003,4.08e-12,5;UBERON:0002097,4.08e-12,5;UBERON:0002199,4.08e-12,5;UBERON:0007029,4.08e-12,5;UBERON:0007376,4.08e-12,5;UBERON:0002416,4.08e-12,5;UBERON:0007383,4.08e-12,5;UBERON:0003100,1.86e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0.588231488031014,1.36609096991689,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0.420649922702764,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0.258937883647172,1.1875371125186,0.173485326766136,0,0,0,0,1.25666591329675,0.247194967734374,2.4581890676385,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.101839363850316,1.99051152976149,0.252722758433675,1.05220927943237,1.30120442962704,2.06911893990126,1.44049703844279,2.10986744970001,2.72145996605311,3.33095672740609,2.15513966487376,4.13925393182425,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0.878200461164203,0.134206418760372,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.701358198903186,0.758838445491087,1.47610147979602,1.09899109488962,1.48076596706161,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0.325929952884052,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,2.45882136509518,2.75936746304733,0,0.117211686592203,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0,11.071326646245,0.178065603667255,0.162886959353576,2.63952196756057,0,0,0,0,0,0,0,0,0,0.632073515871632,0,1.03135543248187,0,1.62054984628179,0.517434735131018,0,0,0.356737635204141,0.164549020602121,0,0.23467170806371,0.42366414172764,0.220528398054962,8.07942639413252,1.61464426695906,8.08193194037288,4.41677672811605,3.11867709515616,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.743881101528023,1.04702376793612,0.129614973291793,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0,0.288030006257865,0.632022241256357,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,1.9318959403219,30.7799259739938,3.47988086107804,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.187283014939765,0.640251524048693,0.861532034334199,0.952587382566147,0.231768651889711,0.77163688185482,0.824171801606613,1.32479028120958,0.342869252385415,1.06485483695602,0.476872379894642,0.436039249896986,1.03520318456864,0.761531471025089,0.73171189149109,0.789209134313529,0.543216455383447,1.12228454331548,0.355905054372522,0.591026894253381,0.818462086339379,0.154936841185966,0.964533054905707,0.499621155875892,0.701794825336225,1.28922632428979,0.382576664137687,1.98532277207564,1.85494268496337 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0.588231488031014,1.36609096991689,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0.420649922702764,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0.258937883647172,1.1875371125186,0.173485326766136,0,0,0,0,1.25666591329675,0.247194967734374,2.4581890676385,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.101839363850316,1.99051152976149,0.252722758433675,1.05220927943237,1.30120442962704,2.06911893990126,1.44049703844279,2.10986744970001,2.72145996605311,3.33095672740609,2.15513966487376,4.13925393182425,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0.878200461164203,0.134206418760372,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.701358198903186,0.758838445491087,1.47610147979602,1.09899109488962,1.48076596706161,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.37898282354097,0.325929952884052,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,2.45882136509518,2.75936746304733,0,0.117211686592203,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0,11.071326646245,0.178065603667255,0.162886959353576,2.63952196756057,0,0,0,0,0,0,0,0,0,0.632073515871632,0,1.03135543248187,0,1.62054984628179,0.517434735131018,0,0,0.356737635204141,0.164549020602121,0,0.23467170806371,0.42366414172764,0.220528398054962,8.07942639413252,1.61464426695906,8.08193194037288,4.41677672811605,3.11867709515616,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.743881101528023,1.04702376793612,0.129614973291793,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0,0.288030006257865,0.632022241256357,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,1.9318959403219,30.7799259739938,3.47988086107804,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.187283014939765,0.640251524048693,0.861532034334199,0.952587382566147,0.231768651889711,0.77163688185482,0.824171801606613,1.32479028120958,0.342869252385415,1.06485483695602,0.476872379894642,0.436039249896986,1.03520318456864,0.761531471025089,0.73171189149109,0.789209134313529,0.543216455383447,1.12228454331548,0.355905054372522,0.591026894253381,0.818462086339379,0.154936841185966,0.964533054905707,0.499621155875892,0.701794825336225,1.28922632428979,0.382576664137687,1.98532277207564,1.85494268496337 | ||
|short_description=p2@Tshr | |||
}} | }} |
Latest revision as of 00:05, 27 September 2015
Short description: | p2@Tshr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tshr_5end |
Coexpression cluster: | MCL_coexpression_mm9:106 |
Association with transcript: | 31bp_to_ENSMUST00000021343, ENSMUST00000021346, NM_001113404, NM_011648, uc007okp.2, uc007okq.2_5end |
EntrezGene: | Tshr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal placode | 7.06e-19 | 13 |
eye | 1.26e-18 | 9 |
camera-type eye | 1.26e-18 | 9 |
simple eye | 1.26e-18 | 9 |
immature eye | 1.26e-18 | 9 |
ocular region | 1.26e-18 | 9 |
visual system | 1.26e-18 | 9 |
face | 1.26e-18 | 9 |
optic cup | 1.26e-18 | 9 |
optic vesicle | 1.26e-18 | 9 |
eye primordium | 1.26e-18 | 9 |
subdivision of head | 6.62e-15 | 11 |
sense organ | 1.64e-13 | 12 |
sensory system | 1.64e-13 | 12 |
entire sense organ system | 1.64e-13 | 12 |
head | 2.48e-12 | 13 |
zone of skin | 4.08e-12 | 5 |
skin epidermis | 4.08e-12 | 5 |
skin of body | 4.08e-12 | 5 |
integument | 4.08e-12 | 5 |
surface | 4.08e-12 | 5 |
outer epithelium | 4.08e-12 | 5 |
integumental system | 4.08e-12 | 5 |
enveloping layer of ectoderm | 4.08e-12 | 5 |
female organism | 1.86e-07 | 11 |