FFCP PHASE1:Mm9::chr12:92828139..92828142,-: Difference between revisions
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{{FFCP|EntrezGene=83602|HGNC=|UniProt=Q0VGZ0,Q99PM3|association_with_transcript=-50bp_to_NM_031391,uc007okr.2_5end|description=CAGE_peak_5_at_Gtf2a1_5end|id=chr12:92828139..92828142,-|ontology_enrichment_celltype=CL:0000221!7.00e-16!44;CL:0000133!7.00e-16!44;CL:0002319!1.13e-15!43;CL:0000055!3.49e-15!50;CL:0000540!1.33e-13!33;CL:0000047!1.33e-13!33;CL:0000031!1.33e-13!33;CL:0000404!1.33e-13!33;CL:0000117!1.21e-12!23;CL:0000337!1.21e-12!23;CL:0000393!2.23e-12!39;CL:0000211!2.23e-12!39;CL:0000548!1.48e-11!115;CL:0000004!1.48e-11!115;CL:0000255!1.48e-11!115;CL:0000723!2.88e-11!91;CL:0000048!2.88e-11!91;CL:0002371!1.65e-10!118;CL:0000034!1.86e-10!97;CL:0002321!4.50e-10!70;CL:0000220!4.50e-10!70;CL:0000144!1.56e-09!121;CL:0000012!1.56e-09!121|ontology_enrichment_celltype_v019_2=CL:0000117,1.72e-37,23;CL:0000337,1.72e-37,23;CL:0000540,3.16e-25,33;CL:0000047,3.16e-25,33;CL:0000031,3.16e-25,33;CL:0000404,3.16e-25,33;CL:0002319,2.79e-24,43;CL:0000221,1.19e-23,44;CL:0000133,1.19e-23,44;CL:0002609,1.14e-21,6;CL:0000393,7.01e-21,39;CL:0000211,7.01e-21,39;CL:0002321,1.84e-15,70;CL:0000723,2.19e-12,91;CL:0000048,2.19e-12,91;CL:0002612,5.33e-12,3;CL:0002608,1.85e-11,3;CL:0000034,2.18e-11,97;CL:0002613,3.86e-11,3;CL:0000217,1.17e-08,2;CL:0000328,1.17e-08,2;CL:0002573,1.17e-08,2;CL:0002376,1.17e-08,2;CL:0000218,1.17e-08,2;CL:0000692,1.17e-08,2;CL:0002377,1.17e-08,2;CL:0002375,1.17e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.49e-11!75;UBERON:0001016!3.49e-11!75;UBERON:0001017!4.47e-10!73;UBERON:0005743!4.47e-10!73;UBERON:0002020!7.02e-08!34;UBERON:0004121!3.28e-07!102;UBERON:0000924!3.28e-07!102;UBERON:0006601!3.28e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.39e-24,34;UBERON:0000073,3.36e-16,54;UBERON:0001016,8.80e-16,75;UBERON:0003528,1.31e-15,29;UBERON:0002791,1.31e-15,29;UBERON:0001893,1.31e-15,29;UBERON:0001049,9.01e-15,52;UBERON:0005068,9.01e-15,52;UBERON:0006241,9.01e-15,52;UBERON:0007135,9.01e-15,52;UBERON:0001017,1.15e-12,73;UBERON:0001948,4.31e-12,5;UBERON:0002315,4.31e-12,5;UBERON:0002257,5.33e-12,3;UBERON:0004121,1.12e-11,95;UBERON:0000924,1.12e-11,95;UBERON:0006601,1.12e-11,95;UBERON:0002346,1.98e-11,64;UBERON:0003075,1.98e-11,64;UBERON:0007284,1.98e-11,64;UBERON:0002780,4.76e-11,39;UBERON:0001890,4.76e-11,39;UBERON:0006240,4.76e-11,39;UBERON:0003080,1.02e-10,40;UBERON:0002240,4.30e-10,6;UBERON:0005174,4.30e-10,6;UBERON:0001137,4.30e-10,6;UBERON:0000956,7.20e-10,21;UBERON:0001869,7.20e-10,21;UBERON:0000203,7.20e-10,21;UBERON:0010371,1.21e-09,73;UBERON:0002616,4.89e-09,46;UBERON:0000955,8.46e-09,47;UBERON:0006238,8.46e-09,47;UBERON:0003056,2.37e-08,49;UBERON:0002420,2.91e-07,8;UBERON:0007245,2.91e-07,8;UBERON:0010009,2.91e-07,8;UBERON:0010011,2.91e-07,8;UBERON:0000454,2.91e-07,8;UBERON:0010314,5.06e-07,92;UBERON:0000369,7.28e-07,5;UBERON:0002435,7.28e-07,5;UBERON:0000204,7.28e-07,5;UBERON:0010082,7.28e-07,5|phase1_expression=0,0.697950815278722,0,0,0,0.16787927191189,0,0.645616617207881,0.140788722151667,0.70219357896598,0.171217968225505,0.0797721589953364,0.342401459862411,0.174840804837995,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0.42438965179803,0.17008658030214,0.297872853602656,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0.635030673459631,1.23012957516914,0,0,0,0.204169356262369,0,0,0,1.17646297606203,0,0,0,0,0,0,0.872100625521786,0.439372365468944,0.194429899074283,0.419959264876088,0,0,0,0.672187598284928,0.771778308107841,0.286533439938757,0.515672092277442,1.21389876515759,0.528990979272033,0,0,0,0.449949858640699,0,0.7104801149461,0.599200221036809,0.768436610643109,2.17748185847803,1.35005938331691,1.89292465216244,0.856952953211411,1.32521124570968,1.5923803897944,1.34183659425531,1.83843757322004,0,0.638436690425939,1.84327839907492,1.05509030184155,1.09785172322892,3.12548022334056,0.558365998002762,0.56276261003168,1.5279824777681,1.47314292736834,2.56269025438385,2.05039390407831,2.72614295999463,1.73814588245607,0,0.860423876981386,0,0,1.94932925234301,0.896053774194671,0.140444420131752,0,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.432982082022428,0.760079596425296,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0,1.19980546198682,0.254140454146129,0,0,0.251308704225729,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.204109497453984,0,0,0,0.215567992932842,0.189106080167819,0,0.657587197282725,0,0.348252166522167,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0.243206428637567,0,0,0,0,0.514523061896422,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0.123397163921801,0,0.33369021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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=83602 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q0VGZ0,Q99PM3 | |||
|association_with_transcript=-50bp_to_NM_031391,uc007okr.2_5end | |||
|cluster_id=chr12:92828139..92828142,- | |||
|description=CAGE_peak_5_at_Gtf2a1_5end | |||
|id=chr12:92828139..92828142,- | |||
|ontology_enrichment_celltype=CL:0000221!7.00e-16!44;CL:0000133!7.00e-16!44;CL:0002319!1.13e-15!43;CL:0000055!3.49e-15!50;CL:0000540!1.33e-13!33;CL:0000047!1.33e-13!33;CL:0000031!1.33e-13!33;CL:0000404!1.33e-13!33;CL:0000117!1.21e-12!23;CL:0000337!1.21e-12!23;CL:0000393!2.23e-12!39;CL:0000211!2.23e-12!39;CL:0000548!1.48e-11!115;CL:0000004!1.48e-11!115;CL:0000255!1.48e-11!115;CL:0000723!2.88e-11!91;CL:0000048!2.88e-11!91;CL:0002371!1.65e-10!118;CL:0000034!1.86e-10!97;CL:0002321!4.50e-10!70;CL:0000220!4.50e-10!70;CL:0000144!1.56e-09!121;CL:0000012!1.56e-09!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.72e-37,23;CL:0000337,1.72e-37,23;CL:0000540,3.16e-25,33;CL:0000047,3.16e-25,33;CL:0000031,3.16e-25,33;CL:0000404,3.16e-25,33;CL:0002319,2.79e-24,43;CL:0000221,1.19e-23,44;CL:0000133,1.19e-23,44;CL:0002609,1.14e-21,6;CL:0000393,7.01e-21,39;CL:0000211,7.01e-21,39;CL:0002321,1.84e-15,70;CL:0000723,2.19e-12,91;CL:0000048,2.19e-12,91;CL:0002612,5.33e-12,3;CL:0002608,1.85e-11,3;CL:0000034,2.18e-11,97;CL:0002613,3.86e-11,3;CL:0000217,1.17e-08,2;CL:0000328,1.17e-08,2;CL:0002573,1.17e-08,2;CL:0002376,1.17e-08,2;CL:0000218,1.17e-08,2;CL:0000692,1.17e-08,2;CL:0002377,1.17e-08,2;CL:0002375,1.17e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.49e-11!75;UBERON:0001016!3.49e-11!75;UBERON:0001017!4.47e-10!73;UBERON:0005743!4.47e-10!73;UBERON:0002020!7.02e-08!34;UBERON:0004121!3.28e-07!102;UBERON:0000924!3.28e-07!102;UBERON:0006601!3.28e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.39e-24,34;UBERON:0000073,3.36e-16,54;UBERON:0001016,8.80e-16,75;UBERON:0003528,1.31e-15,29;UBERON:0002791,1.31e-15,29;UBERON:0001893,1.31e-15,29;UBERON:0001049,9.01e-15,52;UBERON:0005068,9.01e-15,52;UBERON:0006241,9.01e-15,52;UBERON:0007135,9.01e-15,52;UBERON:0001017,1.15e-12,73;UBERON:0001948,4.31e-12,5;UBERON:0002315,4.31e-12,5;UBERON:0002257,5.33e-12,3;UBERON:0004121,1.12e-11,95;UBERON:0000924,1.12e-11,95;UBERON:0006601,1.12e-11,95;UBERON:0002346,1.98e-11,64;UBERON:0003075,1.98e-11,64;UBERON:0007284,1.98e-11,64;UBERON:0002780,4.76e-11,39;UBERON:0001890,4.76e-11,39;UBERON:0006240,4.76e-11,39;UBERON:0003080,1.02e-10,40;UBERON:0002240,4.30e-10,6;UBERON:0005174,4.30e-10,6;UBERON:0001137,4.30e-10,6;UBERON:0000956,7.20e-10,21;UBERON:0001869,7.20e-10,21;UBERON:0000203,7.20e-10,21;UBERON:0010371,1.21e-09,73;UBERON:0002616,4.89e-09,46;UBERON:0000955,8.46e-09,47;UBERON:0006238,8.46e-09,47;UBERON:0003056,2.37e-08,49;UBERON:0002420,2.91e-07,8;UBERON:0007245,2.91e-07,8;UBERON:0010009,2.91e-07,8;UBERON:0010011,2.91e-07,8;UBERON:0000454,2.91e-07,8;UBERON:0010314,5.06e-07,92;UBERON:0000369,7.28e-07,5;UBERON:0002435,7.28e-07,5;UBERON:0000204,7.28e-07,5;UBERON:0010082,7.28e-07,5 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0.16787927191189,0,0.645616617207881,0.140788722151667,0.70219357896598,0.171217968225505,0.0797721589953364,0.342401459862411,0.174840804837995,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0.42438965179803,0.17008658030214,0.297872853602656,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0.635030673459631,1.23012957516914,0,0,0,0.204169356262369,0,0,0,1.17646297606203,0,0,0,0,0,0,0.872100625521786,0.439372365468944,0.194429899074283,0.419959264876088,0,0,0,0.672187598284928,0.771778308107841,0.286533439938757,0.515672092277442,1.21389876515759,0.528990979272033,0,0,0,0.449949858640699,0,0.7104801149461,0.599200221036809,0.768436610643109,2.17748185847803,1.35005938331691,1.89292465216244,0.856952953211411,1.32521124570968,1.5923803897944,1.34183659425531,1.83843757322004,0,0.638436690425939,1.84327839907492,1.05509030184155,1.09785172322892,3.12548022334056,0.558365998002762,0.56276261003168,1.5279824777681,1.47314292736834,2.56269025438385,2.05039390407831,2.72614295999463,1.73814588245607,0,0.860423876981386,0,0,1.94932925234301,0.896053774194671,0.140444420131752,0,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.432982082022428,0.760079596425296,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0.292780797011547,0,0,0,1.19980546198682,0.254140454146129,0,0,0.251308704225729,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0.229902104433473,0,0.30140963567143,0.204109497453984,0,0,0,0.215567992932842,0.189106080167819,0,0.657587197282725,0,0.348252166522167,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0.243206428637567,0,0,0,0,0.514523061896422,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0,0,0,0,0.140271639780637,0,0,0,0.123397163921801,0,0.333690211432188,0,0.449724224769707,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.848725428875941,0,0.167506257441816,0,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,2.71952841909355,0,0,0,0.117211686592203,0.163934945376675,0,0.94652465824877,0.780877488593277,0.430846795465598,0.238968797952552,0.891194696329576,0.283076530788832,0.404810701674894,0.292255857911312,0,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0.177340233642274,0.535106452806212,0.164549020602121,0.608929898229199,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,0,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0.457556346413045,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0.258319646955462,0,0.352071715937262,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.79472541912506,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0.221985953374065,0.269141569828427,0.167884616364078,0,0.187682475451182,0.183151624267265,0,0,0.564751842617067,0,0,0.515559547031063,0,0,1.35004500046361,0,0,1.03552062350364,0.207574695168353,0,0,0.486213434136588,0,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0.516919220600519,0.476293691283074,0.347652977834566,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0.548783918618318,0.526139422875686,0.543216455383447,0,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Gtf2a1 | |||
}} |
Latest revision as of 00:08, 27 September 2015
Short description: | p5@Gtf2a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gtf2a1_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_NM_031391, uc007okr.2_5end |
EntrezGene: | Gtf2a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.72e-37 | 23 |
neuroblast (sensu Vertebrata) | 1.72e-37 | 23 |
neuron | 3.16e-25 | 33 |
neuronal stem cell | 3.16e-25 | 33 |
neuroblast | 3.16e-25 | 33 |
electrically signaling cell | 3.16e-25 | 33 |
neural cell | 2.79e-24 | 43 |
ectodermal cell | 1.19e-23 | 44 |
neurectodermal cell | 1.19e-23 | 44 |
neuron of cerebral cortex | 1.14e-21 | 6 |
electrically responsive cell | 7.01e-21 | 39 |
electrically active cell | 7.01e-21 | 39 |
embryonic cell | 1.84e-15 | 70 |
somatic stem cell | 2.19e-12 | 91 |
multi fate stem cell | 2.19e-12 | 91 |
neuron of the ventral spinal cord | 5.33e-12 | 3 |
hippocampal neuron | 1.85e-11 | 3 |
stem cell | 2.18e-11 | 97 |
striatum neuron | 3.86e-11 | 3 |
insulating cell | 1.17e-08 | 2 |
myelin accumulating cell | 1.17e-08 | 2 |
Schwann cell | 1.17e-08 | 2 |
non-myelinating Schwann cell | 1.17e-08 | 2 |
myelinating Schwann cell;;Schwann cell | 1.17e-08 | 2 |
terminal Schwann cell | 1.17e-08 | 2 |
immature Schwann cell | 1.17e-08 | 2 |
Schwann cell precursor | 1.17e-08 | 2 |