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FFCP PHASE1:Mm9::chr1:22812986..22813005,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:22812986..22813005,-
|DHSsupport=NA
|short_description=p2@Rims1
|DPIdataset=NA
|description=CAGE_peak_2_at_Rims1_5end
|association_with_transcript=-423bp_to_ENSMUST00000097808,NM_001012623,NM_001012624,NM_001012625,NM_053270,NM_183018,uc007als.1,uc007alt.1,uc007alu.1,uc007alv.1,uc007alw.1,uc007aly.1_5end
|EntrezGene=116837
|EntrezGene=116837
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=E9PWP6,Q99NE5,Q6BCW5
|UniProt=E9PWP6,Q99NE5,Q6BCW5
|association_with_transcript=-423bp_to_ENSMUST00000097808,NM_001012623,NM_001012624,NM_001012625,NM_053270,NM_183018,uc007als.1,uc007alt.1,uc007alu.1,uc007alv.1,uc007alw.1,uc007aly.1_5end
|cluster_id=chr1:22812986..22813005,-
|description=CAGE_peak_2_at_Rims1_5end
|id=chr1:22812986..22813005,-
|ontology_enrichment_celltype=CL:0000117!4.77e-14!23;CL:0000337!4.77e-14!23;CL:0000540!2.66e-08!33;CL:0000047!2.66e-08!33;CL:0000031!2.66e-08!33;CL:0000404!2.66e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,5.60e-20,23;CL:0000337,5.60e-20,23;CL:0000540,1.43e-12,33;CL:0000047,1.43e-12,33;CL:0000031,1.43e-12,33;CL:0000404,1.43e-12,33;CL:0000393,1.98e-09,39;CL:0000211,1.98e-09,39;CL:0002319,7.27e-08,43;CL:0000221,1.59e-07,44;CL:0000133,1.59e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.53e-23!63;UBERON:0001049!1.18e-22!52;UBERON:0005068!1.18e-22!52;UBERON:0006241!1.18e-22!52;UBERON:0007135!1.18e-22!52;UBERON:0002346!4.72e-22!71;UBERON:0003075!4.72e-22!71;UBERON:0007284!4.72e-22!71;UBERON:0000955!1.77e-21!50;UBERON:0006238!1.77e-21!50;UBERON:0003056!4.70e-21!49;UBERON:0002616!8.20e-21!49;UBERON:0002020!5.29e-19!34;UBERON:0001017!6.23e-19!73;UBERON:0005743!6.23e-19!73;UBERON:0000073!1.21e-18!75;UBERON:0001016!1.21e-18!75;UBERON:0003080!4.76e-18!40;UBERON:0002780!1.78e-17!39;UBERON:0001890!1.78e-17!39;UBERON:0006240!1.78e-17!39;UBERON:0004121!4.54e-16!102;UBERON:0000924!4.54e-16!102;UBERON:0006601!4.54e-16!102;UBERON:0002791!9.82e-16!29;UBERON:0003528!9.82e-16!29;UBERON:0001893!9.82e-16!29;UBERON:0000956!5.93e-11!21;UBERON:0001869!5.93e-11!21;UBERON:0000203!5.93e-11!21;UBERON:0007811!1.90e-10!86;UBERON:0000153!6.92e-10!94;UBERON:0002619!3.54e-09!17;UBERON:0002021!5.74e-09!10;UBERON:0000411!5.74e-09!10;UBERON:0001950!5.74e-09!10;UBERON:0000025!1.90e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.80e-31,54;UBERON:0002346,3.11e-29,64;UBERON:0003075,3.11e-29,64;UBERON:0007284,3.11e-29,64;UBERON:0001049,1.17e-28,52;UBERON:0005068,1.17e-28,52;UBERON:0006241,1.17e-28,52;UBERON:0007135,1.17e-28,52;UBERON:0002020,2.75e-28,34;UBERON:0001017,1.76e-26,73;UBERON:0001016,2.72e-25,75;UBERON:0010371,1.26e-24,73;UBERON:0000955,4.81e-24,47;UBERON:0006238,4.81e-24,47;UBERON:0003056,9.20e-24,49;UBERON:0003528,2.01e-23,29;UBERON:0002791,2.01e-23,29;UBERON:0001893,2.01e-23,29;UBERON:0002616,4.01e-23,46;UBERON:0004121,5.00e-23,95;UBERON:0000924,5.00e-23,95;UBERON:0006601,5.00e-23,95;UBERON:0003080,4.03e-21,40;UBERON:0002780,2.60e-20,39;UBERON:0001890,2.60e-20,39;UBERON:0006240,2.60e-20,39;UBERON:0000956,2.56e-16,21;UBERON:0001869,2.56e-16,21;UBERON:0000203,2.56e-16,21;UBERON:0010314,5.22e-16,92;UBERON:0002619,1.06e-13,17;UBERON:0002021,1.75e-12,10;UBERON:0000411,1.75e-12,10;UBERON:0001950,1.75e-12,10;UBERON:0002420,3.06e-08,8;UBERON:0007245,3.06e-08,8;UBERON:0010009,3.06e-08,8;UBERON:0010011,3.06e-08,8;UBERON:0000454,3.06e-08,8;UBERON:0003076,5.96e-08,12;UBERON:0003057,5.96e-08,12
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68802551266472,9.52183762689659,8.23980824558033,0,0,0,0,0,0,0,2.17748185847803,2.16009501330705,2.3135745748652,12.2829923293636,7.73039893330647,4.04219637409348,3.25874601462004,4.5960939330501,8.8092704799511,19.025413374693,15.3606533256243,8.04506355154182,7.77644970620482,7.29278718779464,8.93385596804419,6.19038871034848,13.5990440521361,15.6153150301044,16.7998583342941,8.76077395378913,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,0.845060518660083,0,0,0,0,0,0,0.68510327831436,0,0.445326417194474,0.520455980298408,0,0,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0.970601099684455,0.441683036920787,0.484875253135222,0,28.1069565131085,33.9303665037797,0.255457055208591,0,0,0,6.5907881338122,11.8950156732843,11.0575829859321,26.9427696298029,45.0059204901382,12.6750707181332,15.7374025175725,0.712875546952214,0,0,0.420883711772948,0.780722657776222,1.37941262660084,1.44049703844279,1.50704817835715,3.40182495756639,3.58718416797579,4.12287588062807,3.10444044886819,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,1.11218899690239,0,0.205782136407943,0,0,0,0,0.207125772535502,0.938104239924385,0.540186184383045,0.710234206755631,0.196764231747404,0.462801338662135,0.697601834251224,0.804820204198858,0.350296027101508,0.16455984991348,0,0.243206428637567,0,0.219550115291051,0,18.2952255250791,8.43817821510132,0,0,0.853153002140936,0.928946687441754,1.28867461322093,0.605050573870028,0.22237804384487,1.14135375667535,0.474529061544512,0.658795818896044,1.00534083520108,0.397912944082302,0.779856348476481,1.79763881730844,0.432276099749388,0.398282546508734,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0,0.420814919341911,0.0632365371242573,0,0,0,0,0,0.393117990226406,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.757965647081939,1.62964976442026,0.848725428875941,0.234690248288502,0.335012514883631,0.714130922658041,0.390267295715598,0.788175720530955,1.10732344824387,0.478364305972461,0,0.345369963731791,0,0,0,0,0,4.65596710964597,5.86058432961016,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,10.2822821254978,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.36012218806262,0.776152102696527,0.214337035031592,0.886701168211368,1.07021290561242,1.81003922662333,0.913394847343798,0,0,0,0,0,0.301564624640779,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.216010681643603,0.209088296014469,0.436725127492355,0.539457385539283,0.330613822901344,0,0,0,0.56369293868419,0.448549638131936,0,0,0,0,0.234714477291508,0.39061315453185,0.314578033277133,0.241584120826006,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,66.0759655861968,52.9374021983253,58.4353423708185,40.9010573977977,56.1767666211927,42.3020582538232,42.5264175146038,41.8798718998525,34.4388230827996,36.2432218226274,1.03787347584177,0.399024873401031,1.53660245178721,1.21553358534147,1.25767897576789,2.02227859295016,0.44449345560323,1.44224540067226,1.60459604795908,2.77966932940177,3.8021894983536,2.64076877940507,1.96647165686753,2.36893063898016,2.12511235135769,2.85776214769844,1.85414921511769,3.27945674788299,2.47251540481984,1.47198920134397,2.40008476669791,1.95223386775271,0.953744759789284,1.30811774969096,2.1645157495526,1.77690676572521,2.19513567447327,2.63069711437843,2.03706170768793,2.24456908663095,1.77952527186261,1.97008964751127,0.818462086339379,1.70430525304563,2.3148793317737,3.49734809113124,1.40358965067245,2.36358159453128,1.14772999241306,0.661774257358546,0.231867835620421
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.68802551266472,9.52183762689659,8.23980824558033,0,0,0,0,0,0,0,2.17748185847803,2.16009501330705,2.3135745748652,12.2829923293636,7.73039893330647,4.04219637409348,3.25874601462004,4.5960939330501,8.8092704799511,19.025413374693,15.3606533256243,8.04506355154182,7.77644970620482,7.29278718779464,8.93385596804419,6.19038871034848,13.5990440521361,15.6153150301044,16.7998583342941,8.76077395378913,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,0.845060518660083,0,0,0,0,0,0,0.68510327831436,0,0.445326417194474,0.520455980298408,0,0,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0.970601099684455,0.441683036920787,0.484875253135222,0,28.1069565131085,33.9303665037797,0.255457055208591,0,0,0,6.5907881338122,11.8950156732843,11.0575829859321,26.9427696298029,45.0059204901382,12.6750707181332,15.7374025175725,0.712875546952214,0,0,0.420883711772948,0.780722657776222,1.37941262660084,1.44049703844279,1.50704817835715,3.40182495756639,3.58718416797579,4.12287588062807,3.10444044886819,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,1.11218899690239,0,0.205782136407943,0,0,0,0,0.207125772535502,0.938104239924385,0.540186184383045,0.710234206755631,0.196764231747404,0.462801338662135,0.697601834251224,0.804820204198858,0.350296027101508,0.16455984991348,0,0.243206428637567,0,0.219550115291051,0,18.2952255250791,8.43817821510132,0,0,0.853153002140936,0.928946687441754,1.28867461322093,0.605050573870028,0.22237804384487,1.14135375667535,0.474529061544512,0.658795818896044,1.00534083520108,0.397912944082302,0.779856348476481,1.79763881730844,0.432276099749388,0.398282546508734,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0,0.420814919341911,0.0632365371242573,0,0,0,0,0,0.393117990226406,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.757965647081939,1.62964976442026,0.848725428875941,0.234690248288502,0.335012514883631,0.714130922658041,0.390267295715598,0.788175720530955,1.10732344824387,0.478364305972461,0,0.345369963731791,0,0,0,0,0,4.65596710964597,5.86058432961016,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,10.2822821254978,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.36012218806262,0.776152102696527,0.214337035031592,0.886701168211368,1.07021290561242,1.81003922662333,0.913394847343798,0,0,0,0,0,0.301564624640779,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.216010681643603,0.209088296014469,0.436725127492355,0.539457385539283,0.330613822901344,0,0,0,0.56369293868419,0.448549638131936,0,0,0,0,0.234714477291508,0.39061315453185,0.314578033277133,0.241584120826006,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,66.0759655861968,52.9374021983253,58.4353423708185,40.9010573977977,56.1767666211927,42.3020582538232,42.5264175146038,41.8798718998525,34.4388230827996,36.2432218226274,1.03787347584177,0.399024873401031,1.53660245178721,1.21553358534147,1.25767897576789,2.02227859295016,0.44449345560323,1.44224540067226,1.60459604795908,2.77966932940177,3.8021894983536,2.64076877940507,1.96647165686753,2.36893063898016,2.12511235135769,2.85776214769844,1.85414921511769,3.27945674788299,2.47251540481984,1.47198920134397,2.40008476669791,1.95223386775271,0.953744759789284,1.30811774969096,2.1645157495526,1.77690676572521,2.19513567447327,2.63069711437843,2.03706170768793,2.24456908663095,1.77952527186261,1.97008964751127,0.818462086339379,1.70430525304563,2.3148793317737,3.49734809113124,1.40358965067245,2.36358159453128,1.14772999241306,0.661774257358546,0.231867835620421
|short_description=p2@Rims1
}}
}}

Latest revision as of 01:12, 27 September 2015

Short description:p2@Rims1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rims1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -423bp_to_ENSMUST00000097808, NM_001012623, NM_001012624, NM_001012625, NM_053270, NM_183018, uc007als.1, uc007alt.1, uc007alu.1, uc007alv.1, uc007alw.1, uc007aly.1_5end
EntrezGene:Rims1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rims1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.05
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.78
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.76
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B228.11
cerebellum, neonate N30.CNhs11135.1395-42I233.93
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.59
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F111.06
cortex, adult.CNhs10473.12-14D526.94
cortex, neonate N30.CNhs11107.1392-42F245.01
diencephalon, adult.CNhs10482.20-12F212.68
diencephalon, neonate N30.CNhs11201.1388-42B215.74
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G84.12
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E818.30
hippocampus, neonate N00.CNhs11228.627-43G18.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A166.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A252.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A358.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D740.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A456.18
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A542.30
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A642.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A741.88
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A834.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.24
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.60e-2023
neuroblast (sensu Vertebrata)5.60e-2023
neuron1.43e-1233
neuronal stem cell1.43e-1233
neuroblast1.43e-1233
electrically signaling cell1.43e-1233
electrically responsive cell1.98e-0939
electrically active cell1.98e-0939
neural cell7.27e-0843
ectodermal cell1.59e-0744
neurectodermal cell1.59e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.80e-3154
neurectoderm3.11e-2964
neural plate3.11e-2964
presumptive neural plate3.11e-2964
neural tube1.17e-2852
neural rod1.17e-2852
future spinal cord1.17e-2852
neural keel1.17e-2852
gray matter2.75e-2834
central nervous system1.76e-2673
nervous system2.72e-2575
ecto-epithelium1.26e-2473
brain4.81e-2447
future brain4.81e-2447
pre-chordal neural plate9.20e-2449
brain grey matter2.01e-2329
regional part of telencephalon2.01e-2329
telencephalon2.01e-2329
regional part of brain4.01e-2346
ectoderm-derived structure5.00e-2395
ectoderm5.00e-2395
presumptive ectoderm5.00e-2395
anterior neural tube4.03e-2140
regional part of forebrain2.60e-2039
forebrain2.60e-2039
future forebrain2.60e-2039
cerebral cortex2.56e-1621
cerebral hemisphere2.56e-1621
pallium2.56e-1621
structure with developmental contribution from neural crest5.22e-1692
regional part of cerebral cortex1.06e-1317
occipital lobe1.75e-1210
visual cortex1.75e-1210
neocortex1.75e-1210
basal ganglion3.06e-088
nuclear complex of neuraxis3.06e-088
aggregate regional part of brain3.06e-088
collection of basal ganglia3.06e-088
cerebral subcortex3.06e-088
posterior neural tube5.96e-0812
chordal neural plate5.96e-0812
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