FFCP PHASE1:Mm9::chr2:83652724..83652800,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241520 | |EntrezGene=241520 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q14CH0 | |UniProt=Q14CH0 | ||
|association_with_transcript=0bp_to_ENSMUST00000051454_5end | |association_with_transcript=0bp_to_ENSMUST00000051454_5end | ||
|cluster_id=chr2:83652724..83652800,+ | |||
|description=CAGE_peak_1_at_Fam171b_5end | |description=CAGE_peak_1_at_Fam171b_5end | ||
|id=chr2:83652724..83652800,+ | |id=chr2:83652724..83652800,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.07e-15!33;CL:0000047!1.07e-15!33;CL:0000031!1.07e-15!33;CL:0000404!1.07e-15!33;CL:0000393!1.49e-15!39;CL:0000211!1.49e-15!39;CL:0000055!1.96e-15!50;CL:0002319!5.22e-15!43;CL:0000221!8.18e-15!44;CL:0000133!8.18e-15!44;CL:0000117!1.36e-12!23;CL:0000337!1.36e-12!23 | |ontology_enrichment_celltype=CL:0000540!1.07e-15!33;CL:0000047!1.07e-15!33;CL:0000031!1.07e-15!33;CL:0000404!1.07e-15!33;CL:0000393!1.49e-15!39;CL:0000211!1.49e-15!39;CL:0000055!1.96e-15!50;CL:0002319!5.22e-15!43;CL:0000221!8.18e-15!44;CL:0000133!8.18e-15!44;CL:0000117!1.36e-12!23;CL:0000337!1.36e-12!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.13e-17,33;CL:0000047,8.13e-17,33;CL:0000031,8.13e-17,33;CL:0000404,8.13e-17,33;CL:0000393,1.16e-16,39;CL:0000211,1.16e-16,39;CL:0002319,1.06e-15,43;CL:0000221,1.69e-15,44;CL:0000133,1.69e-15,44;CL:0000117,1.82e-13,23;CL:0000337,1.82e-13,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-33!73;UBERON:0005743!1.27e-33!73;UBERON:0000073!2.17e-33!75;UBERON:0001016!2.17e-33!75;UBERON:0004121!8.13e-32!102;UBERON:0000924!8.13e-32!102;UBERON:0006601!8.13e-32!102;UBERON:0002346!3.70e-28!71;UBERON:0003075!3.70e-28!71;UBERON:0007284!3.70e-28!71;UBERON:0000033!1.52e-25!63;UBERON:0001049!1.08e-24!52;UBERON:0005068!1.08e-24!52;UBERON:0006241!1.08e-24!52;UBERON:0007135!1.08e-24!52;UBERON:0000955!7.29e-24!50;UBERON:0006238!7.29e-24!50;UBERON:0003056!4.17e-23!49;UBERON:0002616!4.34e-23!49;UBERON:0003080!1.31e-19!40;UBERON:0002020!4.28e-19!34;UBERON:0002780!5.76e-19!39;UBERON:0001890!5.76e-19!39;UBERON:0006240!5.76e-19!39;UBERON:0002791!2.00e-16!29;UBERON:0003528!2.00e-16!29;UBERON:0001893!2.00e-16!29;UBERON:0000956!3.56e-12!21;UBERON:0001869!3.56e-12!21;UBERON:0000203!3.56e-12!21;UBERON:0000153!1.24e-11!94;UBERON:0007811!1.38e-10!86;UBERON:0002619!3.25e-10!17;UBERON:0000468!1.75e-08!333;UBERON:0002021!4.42e-08!10;UBERON:0000411!4.42e-08!10;UBERON:0001950!4.42e-08!10;UBERON:0000025!2.98e-07!114 | |ontology_enrichment_uberon=UBERON:0001017!1.27e-33!73;UBERON:0005743!1.27e-33!73;UBERON:0000073!2.17e-33!75;UBERON:0001016!2.17e-33!75;UBERON:0004121!8.13e-32!102;UBERON:0000924!8.13e-32!102;UBERON:0006601!8.13e-32!102;UBERON:0002346!3.70e-28!71;UBERON:0003075!3.70e-28!71;UBERON:0007284!3.70e-28!71;UBERON:0000033!1.52e-25!63;UBERON:0001049!1.08e-24!52;UBERON:0005068!1.08e-24!52;UBERON:0006241!1.08e-24!52;UBERON:0007135!1.08e-24!52;UBERON:0000955!7.29e-24!50;UBERON:0006238!7.29e-24!50;UBERON:0003056!4.17e-23!49;UBERON:0002616!4.34e-23!49;UBERON:0003080!1.31e-19!40;UBERON:0002020!4.28e-19!34;UBERON:0002780!5.76e-19!39;UBERON:0001890!5.76e-19!39;UBERON:0006240!5.76e-19!39;UBERON:0002791!2.00e-16!29;UBERON:0003528!2.00e-16!29;UBERON:0001893!2.00e-16!29;UBERON:0000956!3.56e-12!21;UBERON:0001869!3.56e-12!21;UBERON:0000203!3.56e-12!21;UBERON:0000153!1.24e-11!94;UBERON:0007811!1.38e-10!86;UBERON:0002619!3.25e-10!17;UBERON:0000468!1.75e-08!333;UBERON:0002021!4.42e-08!10;UBERON:0000411!4.42e-08!10;UBERON:0001950!4.42e-08!10;UBERON:0000025!2.98e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.02e-35,73;UBERON:0001016,1.80e-35,75;UBERON:0004121,2.84e-34,95;UBERON:0000924,2.84e-34,95;UBERON:0006601,2.84e-34,95;UBERON:0002346,1.17e-31,64;UBERON:0003075,1.17e-31,64;UBERON:0007284,1.17e-31,64;UBERON:0010371,1.31e-28,73;UBERON:0000073,1.77e-27,54;UBERON:0001049,4.39e-26,52;UBERON:0005068,4.39e-26,52;UBERON:0006241,4.39e-26,52;UBERON:0007135,4.39e-26,52;UBERON:0003056,8.07e-25,49;UBERON:0000955,4.24e-23,47;UBERON:0006238,4.24e-23,47;UBERON:0002616,2.78e-22,46;UBERON:0010314,2.53e-21,92;UBERON:0003080,4.85e-21,40;UBERON:0002020,1.73e-20,34;UBERON:0002780,2.39e-20,39;UBERON:0001890,2.39e-20,39;UBERON:0006240,2.39e-20,39;UBERON:0003528,1.32e-17,29;UBERON:0002791,1.32e-17,29;UBERON:0001893,1.32e-17,29;UBERON:0000956,5.13e-13,21;UBERON:0001869,5.13e-13,21;UBERON:0000203,5.13e-13,21;UBERON:0002619,6.70e-11,17;UBERON:0002021,1.34e-08,10;UBERON:0000411,1.34e-08,10;UBERON:0001950,1.34e-08,10 | |||
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|phase1_expression=5.60520964866779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60989178707088,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53228544712078,5.37297735463427,2.0190142737785,0.782391344348039,2.18025156380447,1.97717564461025,5.8328969722285,2.51975558925653,7.18762821824858,0,0,0,2.82985379639542,3.43840127926508,2.06268836910977,18.4107979382234,24.3335850465135,22.8179305262225,1.0165335962074,0.889294796111139,0,0,0,3.59520132622086,2.68952813725088,18.0419925416751,11.0704869431986,11.9885227970288,12.2829923293636,22.0868540951614,11.8816075238505,9.58454710182364,17.4651569455904,36.3382407297983,33.4540825783192,33.4862242498611,16.6176722540044,20.1272815925301,15.6274011167028,24.0097379141188,33.2029939918691,36.3659829708808,23.8649154233671,30.7522830526062,31.3151068986505,1.59025005999687,3.17400552448499,0.289864488701678,5.16254326188832,0,0.539703191637817,0.649776417447669,0,2.24711072210803,0.511290967734173,0.519572009205738,0.70667914902068,1.69012103732017,0,0,0,0,0,0,1.02765491747154,1.29468941823586,2.3750742250372,2.25530924795977,1.21786191324856,1.15307748628029,1.20578112442098,2.23418543557839,1.75933227861546,0,0.722996784599558,0,1.7794353494215,0.441683036920787,0.484875253135222,0,25.4719293400046,27.0186251789357,0,0,0,0,36.5489160147767,46.2075608846813,17.9685723521396,68.8344307961415,74.6689135404565,40.7264567336738,43.3184172390913,6.21220119486929,1.11966273549084,0.252722758433675,13.0473950649614,5.20481771850815,3.67843367093557,9.18316862007281,9.79581315932148,13.1310443362063,9.60852902136373,10.7756983243688,16.815719098036,3.23351989399263,4.53854592402766,4.39877810409872,3.06874025398605,4.17070873838397,5.57203466435466,3.08673204611915,2.38841120182192,0,0,0.284163499395593,0.621377317606506,1.64168241986767,0.36012412292203,1.42046841351126,0.590292695242212,1.07986979021165,1.16266972375204,0.268273401399619,0.467061369468678,0.822799249567402,1.31333971263276,1.13496333364198,0.877199924551994,0.658650345873152,1.20785776884335,57.829735855135,32.209143674716,0,0.528901133327089,4.05247676016945,2.78684006232526,3.99489130098489,1.4117846723634,1.55664630691409,1.52180500890047,0.949058123089023,0.823494773620054,2.76468729680296,2.58643413653496,1.16978452271472,0.898819408654221,0.648414149624083,0.597423819763102,0.948339504765408,2.05647322697512,1.1270773567308,2.03651327845314,1.55161989734101,1.33258057791605,0.505892296994058,0,0.31399745568275,0.246794327843601,0.296452627087149,0.667380422864376,0.589676985339609,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,1.11642284300551,1.5601883655728,1.01031551178845,0.717589654087649,0.964887042726734,0.369506380333209,2.08440552947533,1.30371981153621,0.169745085775188,0.469380496577004,0,0.714130922658041,0.585400943573396,0.315270288212382,0,0.318909537314974,0.81931657357869,0.518054945597687,0.144649058581512,0,0,0.491764273019036,0.551873492609465,26.6513979379735,31.6471553798949,2.95082901678016,1.26235463602186,7.88770548540642,7.41833614163613,10.1248996934415,4.77937595905104,5.12436950389506,6.79383673893198,7.2865926301481,11.3979784585412,7.90575555893047,167.08708453934,2.12910127812403,1.06839362200353,4.0721739838394,3.62934270539578,1.32745138339963,1.69946445308487,1.51161778482376,0.188605079755898,0.885905678642318,1.22974059177571,1.55056975900933,0.727067458955011,0.356497378384721,0.632073515871632,0,0,26.2138496430417,4.86164953884538,2.58717367565509,3.00071849044229,6.0295679438373,5.17269571046005,7.24015690649332,3.95804433848979,0.469343416127421,0,0.441056796109924,2.63818004706368,3.39075296061402,3.1362720962641,0.835606408021955,1.96969079694074,0.582961673259701,41.3498423483437,0.170870880797853,1.03193433981611,0,0,0,0.457556346413045,0.169978429993855,0.139951452323658,0,2.86401185404534,6.32671987162271,3.65975040828328,2.37611749807963,3.3454127362315,3.9305261474312,3.10187996685088,2.72756403893609,1.57053565190418,0.90730481304255,0,0.56369293868419,1.34564891439581,0.827292452285488,2.13896307178452,1.93739735216597,1.68956125490778,2.34714477291508,1.69265700297135,3.35549902162275,0.483168241652012,0.864090018773596,0,1.21635129174099,0.616265742988964,0.389762468933385,0.537080087002444,0.198681354781265,0.120195449519969,0.443068581523732,0.100966449948148,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.179427713218951,0,2.12508553435409,2.25218970541418,2.74727436400898,1.50057865355346,0.501572104035363,71.7234840123675,73.6520378411483,59.5811333976973,90.9103334598107,66.4530044177523,66.4746629702936,70.8773625243396,62.1443260449424,67.9713613476307,57.471394604452,4.35906859853542,6.3843979744165,5.12200817262403,3.8897074730927,3.98265008993166,3.49302666055027,6.00066165064361,5.76898160268904,6.73930340142812,7.58091635291392,6.59046179714623,4.71565853465191,5.89941497060259,4.161634906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| ||
|short_description=p1@Fam171b | |short_description=p1@Fam171b | ||
}} | }} |
Latest revision as of 01:26, 27 September 2015
Short description: | p1@Fam171b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam171b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000051454_5end |
EntrezGene: | Fam171b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.13e-17 | 33 |
neuronal stem cell | 8.13e-17 | 33 |
neuroblast | 8.13e-17 | 33 |
electrically signaling cell | 8.13e-17 | 33 |
electrically responsive cell | 1.16e-16 | 39 |
electrically active cell | 1.16e-16 | 39 |
neural cell | 1.06e-15 | 43 |
ectodermal cell | 1.69e-15 | 44 |
neurectodermal cell | 1.69e-15 | 44 |
CNS neuron (sensu Vertebrata) | 1.82e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.82e-13 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.02e-35 | 73 |
nervous system | 1.80e-35 | 75 |
ectoderm-derived structure | 2.84e-34 | 95 |
ectoderm | 2.84e-34 | 95 |
presumptive ectoderm | 2.84e-34 | 95 |
neurectoderm | 1.17e-31 | 64 |
neural plate | 1.17e-31 | 64 |
presumptive neural plate | 1.17e-31 | 64 |
ecto-epithelium | 1.31e-28 | 73 |
regional part of nervous system | 1.77e-27 | 54 |
neural tube | 4.39e-26 | 52 |
neural rod | 4.39e-26 | 52 |
future spinal cord | 4.39e-26 | 52 |
neural keel | 4.39e-26 | 52 |
pre-chordal neural plate | 8.07e-25 | 49 |
brain | 4.24e-23 | 47 |
future brain | 4.24e-23 | 47 |
regional part of brain | 2.78e-22 | 46 |
structure with developmental contribution from neural crest | 2.53e-21 | 92 |
anterior neural tube | 4.85e-21 | 40 |
gray matter | 1.73e-20 | 34 |
regional part of forebrain | 2.39e-20 | 39 |
forebrain | 2.39e-20 | 39 |
future forebrain | 2.39e-20 | 39 |
brain grey matter | 1.32e-17 | 29 |
regional part of telencephalon | 1.32e-17 | 29 |
telencephalon | 1.32e-17 | 29 |
cerebral cortex | 5.13e-13 | 21 |
cerebral hemisphere | 5.13e-13 | 21 |
pallium | 5.13e-13 | 21 |
regional part of cerebral cortex | 6.70e-11 | 17 |
occipital lobe | 1.34e-08 | 10 |
visual cortex | 1.34e-08 | 10 |
neocortex | 1.34e-08 | 10 |