FFCP PHASE1:Mm9::chr4:47221137..47221148,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12819 | |EntrezGene=12819 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1463 | |||
|TSSclassifier=NA | |||
|UniProt=A2AJY2,O35206 | |UniProt=A2AJY2,O35206 | ||
|association_with_transcript=104bp_to_ENSMUST00000082303,ENSMUST00000102917_5end | |association_with_transcript=104bp_to_ENSMUST00000082303,ENSMUST00000102917_5end | ||
|cluster_id=chr4:47221137..47221148,+ | |||
|description=CAGE_peak_4_at_Col15a1_5end | |description=CAGE_peak_4_at_Col15a1_5end | ||
|id=chr4:47221137..47221148,+ | |id=chr4:47221137..47221148,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!2.67e-08!26;UBERON:0000990!2.67e-08!26;UBERON:0003133!6.91e-08!24;UBERON:0000468!1.14e-07!333;UBERON:0003102!9.15e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,3.43e-09,24;UBERON:0005156,4.02e-09,26;UBERON:0000990,4.02e-09,26;UBERON:0003100,6.98e-08,11;UBERON:0000991,1.85e-07,18;UBERON:0005564,1.85e-07,18;UBERON:0003102,2.53e-07,22;UBERON:0004176,3.02e-07,17;UBERON:0009196,3.02e-07,17;UBERON:0009117,3.02e-07,17;UBERON:0002553,5.08e-07,39;UBERON:0002323,5.40e-07,37;UBERON:0004458,5.40e-07,37;UBERON:0000474,5.92e-07,9 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.912392380975631,0,0,0.218025156380447,0,0,0,0,0,0,0,0.514518872071894,2.29226751951005,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0.210324961351382,0.285650984403804,1.98781686856452,0,0,0,0,0.510749352340751,0,0,0.182975287204819,0,0.279182999001381,0.56276261003168,0.30559649555362,0.589257170947335,1.28134512719193,0.559198337475902,0.454357159999104,1.88928900266964,0,0,0,0,0,0,2.24711072210803,0.511290967734173,0.779358013808606,0,1.83096445709685,0,0,0,0,0,0,0.11418387971906,0.776813650941515,1.48442139064825,1.56136794089522,0.913396434936424,0.922461989024234,0.60289056221049,1.29347577849275,1.88499886994513,0.988779870937496,3.18118585223806,0,4.36770494858005,3.97514733228708,3.39412677194655,0,0,0,0.510914110417183,0,0,0,0.449371918214468,0.457500602818626,0,0.347648640384553,0.255715457330331,0.62336413367868,0.324482526135515,5.49932564791708,2.98576729464223,0.252722758433675,1.68353484709179,0.260240885925407,0.689706313300419,0.720248519221397,0.452114453507145,0.680364991513279,0.896796041993948,1.49922759295566,1.29351685369508,0.646703978798527,1.13463648100692,0.175951124163949,2.19195732427575,1.39023624612799,5.2237824978325,5.55611768301447,1.79130840136644,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,1.18058539048442,1.3884040159864,2.79040733700489,2.68273401399619,2.45207218971056,2.79751744852917,8.53670813211295,8.59329381186071,9.21059920779594,9.44065495751518,5.63666958793561,0.210289948564127,0.102904612379284,0,0.264450566663544,0.426576501070468,0.464473343720877,0.902072229254653,1.4117846723634,1.55664630691409,0.380451252225118,1.42358718463353,0.823494773620054,1.50801125280162,3.18330355265841,1.9496408711912,1.79763881730844,2.16138049874694,0.597423819763102,0.379335801906163,1.25673363870702,3.38123207019241,1.4255592949172,1.93952487167626,2.66516115583211,4.93244989569207,1.18088118383682,0.941992367048249,1.35736880313981,0,0,0,0,0,0,0,0,0,0.549122826376163,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,1.07638448113147,0,0.554259570499814,0.189491411770485,1.14075483509418,1.18821560042632,2.11221223459652,1.50755631697634,2.61848004974615,1.17080188714679,0.630540576424764,1.32878813789265,1.91345722388985,1.14704320301017,1.20879487306127,0.578596234326046,0,0,2.45882136509518,3.58717770196152,0.160550589987792,0.117211686592203,0,5.55436039849621,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,5.96148357874728,4.98583690268315,9.61033060186099,4.61916344323099,1.32745138339963,0.242780636154981,0.302323556964751,1.32023555829129,1.77181135728464,2.45948118355142,2.32585463851399,2.90826983582004,4.63446591900138,2.84433082142234,0,6.18813259489121,0.680879211507576,0.540183282093931,0.388076051348264,0.643011105094777,0.709360934569094,1.07021290561242,0.822745103010605,1.2178597964584,1.64270195644597,1.0591603543191,0.882113592219848,4.61681508236144,1.13025098687134,5.91066664295927,5.84924485615369,5.25250879184196,1.7488850197791,0.370850604021019,0,1.03193433981611,0.370389054739423,0,0.136694227721025,0,0,0,0,0.954670618015114,0.316335993581135,1.62655573701479,2.80813886136683,5.01811910434725,3.49380101993884,4.31565908431426,3.88471241909079,4.71160695571253,1.42576470620972,3.10669656543463,0,1.04661582230785,1.82004339502807,3.30567020184881,4.00395452780966,5.06868376472335,5.04636126176742,2.99470085141085,1.36317147753424,0.483168241652012,2.01621004380506,0.948033361884535,0.810900861160657,0.616265742988964,0.51968329191118,0.716106782669926,0.39736270956253,0.240390899039938,0.886137163047463,0.605798699688886,0.685861259894999,0.604957110821043,0.682205165178267,0.577271049841977,0.467507608726276,1.13365191807606,0,0,0,4.63655025677257,21.7711671523371,10.0733393346996,7.5028932677673,3.00943262421218,0.564751842617067,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,2.67417388775123,0.419226325255965,1.10306105070008,2.889207461421,3.5025959730612,2.88827288632634,2.52697211763797,2.78827229879264,3.01802146217722,2.80924522409647,2.4969809437899,2.87177344778066,0.476293691283074,2.0859178670074,1.54327376370964,4.94503080963968,2.50238164228475,1.37147700954166,0.887379030796687,2.38436189947321,2.18019624948493,2.1645157495526,2.70766745253365,2.74391959309159,2.10455769150274,2.03706170768793,0,3.44041552560105,2.56111654176465,3.27384834535751,2.63392630016142,1.54325288784913,1.99848462350357,1.87145286756327,3.00819475667618,2.67803664896381,8.82365676478062,7.41977073985349 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.912392380975631,0,0,0.218025156380447,0,0,0,0,0,0,0,0.514518872071894,2.29226751951005,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0.210324961351382,0.285650984403804,1.98781686856452,0,0,0,0,0.510749352340751,0,0,0.182975287204819,0,0.279182999001381,0.56276261003168,0.30559649555362,0.589257170947335,1.28134512719193,0.559198337475902,0.454357159999104,1.88928900266964,0,0,0,0,0,0,2.24711072210803,0.511290967734173,0.779358013808606,0,1.83096445709685,0,0,0,0,0,0,0.11418387971906,0.776813650941515,1.48442139064825,1.56136794089522,0.913396434936424,0.922461989024234,0.60289056221049,1.29347577849275,1.88499886994513,0.988779870937496,3.18118585223806,0,4.36770494858005,3.97514733228708,3.39412677194655,0,0,0,0.510914110417183,0,0,0,0.449371918214468,0.457500602818626,0,0.347648640384553,0.255715457330331,0.62336413367868,0.324482526135515,5.49932564791708,2.98576729464223,0.252722758433675,1.68353484709179,0.260240885925407,0.689706313300419,0.720248519221397,0.452114453507145,0.680364991513279,0.896796041993948,1.49922759295566,1.29351685369508,0.646703978798527,1.13463648100692,0.175951124163949,2.19195732427575,1.39023624612799,5.2237824978325,5.55611768301447,1.79130840136644,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,1.18058539048442,1.3884040159864,2.79040733700489,2.68273401399619,2.45207218971056,2.79751744852917,8.53670813211295,8.59329381186071,9.21059920779594,9.44065495751518,5.63666958793561,0.210289948564127,0.102904612379284,0,0.264450566663544,0.426576501070468,0.464473343720877,0.902072229254653,1.4117846723634,1.55664630691409,0.380451252225118,1.42358718463353,0.823494773620054,1.50801125280162,3.18330355265841,1.9496408711912,1.79763881730844,2.16138049874694,0.597423819763102,0.379335801906163,1.25673363870702,3.38123207019241,1.4255592949172,1.93952487167626,2.66516115583211,4.93244989569207,1.18088118383682,0.941992367048249,1.35736880313981,0,0,0,0,0,0,0,0,0,0.549122826376163,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,1.07638448113147,0,0.554259570499814,0.189491411770485,1.14075483509418,1.18821560042632,2.11221223459652,1.50755631697634,2.61848004974615,1.17080188714679,0.630540576424764,1.32878813789265,1.91345722388985,1.14704320301017,1.20879487306127,0.578596234326046,0,0,2.45882136509518,3.58717770196152,0.160550589987792,0.117211686592203,0,5.55436039849621,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,5.96148357874728,4.98583690268315,9.61033060186099,4.61916344323099,1.32745138339963,0.242780636154981,0.302323556964751,1.32023555829129,1.77181135728464,2.45948118355142,2.32585463851399,2.90826983582004,4.63446591900138,2.84433082142234,0,6.18813259489121,0.680879211507576,0.540183282093931,0.388076051348264,0.643011105094777,0.709360934569094,1.07021290561242,0.822745103010605,1.2178597964584,1.64270195644597,1.0591603543191,0.882113592219848,4.61681508236144,1.13025098687134,5.91066664295927,5.84924485615369,5.25250879184196,1.7488850197791,0.370850604021019,0,1.03193433981611,0.370389054739423,0,0.136694227721025,0,0,0,0,0.954670618015114,0.316335993581135,1.62655573701479,2.80813886136683,5.01811910434725,3.49380101993884,4.31565908431426,3.88471241909079,4.71160695571253,1.42576470620972,3.10669656543463,0,1.04661582230785,1.82004339502807,3.30567020184881,4.00395452780966,5.06868376472335,5.04636126176742,2.99470085141085,1.36317147753424,0.483168241652012,2.01621004380506,0.948033361884535,0.810900861160657,0.616265742988964,0.51968329191118,0.716106782669926,0.39736270956253,0.240390899039938,0.886137163047463,0.605798699688886,0.685861259894999,0.604957110821043,0.682205165178267,0.577271049841977,0.467507608726276,1.13365191807606,0,0,0,4.63655025677257,21.7711671523371,10.0733393346996,7.5028932677673,3.00943262421218,0.564751842617067,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,2.67417388775123,0.419226325255965,1.10306105070008,2.889207461421,3.5025959730612,2.88827288632634,2.52697211763797,2.78827229879264,3.01802146217722,2.80924522409647,2.4969809437899,2.87177344778066,0.476293691283074,2.0859178670074,1.54327376370964,4.94503080963968,2.50238164228475,1.37147700954166,0.887379030796687,2.38436189947321,2.18019624948493,2.1645157495526,2.70766745253365,2.74391959309159,2.10455769150274,2.03706170768793,0,3.44041552560105,2.56111654176465,3.27384834535751,2.63392630016142,1.54325288784913,1.99848462350357,1.87145286756327,3.00819475667618,2.67803664896381,8.82365676478062,7.41977073985349 | ||
|short_description=p4@Col15a1 | |short_description=p4@Col15a1 | ||
}} | }} |
Latest revision as of 01:32, 27 September 2015
Short description: | p4@Col15a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Col15a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1463 |
Association with transcript: | 104bp_to_ENSMUST00000082303, ENSMUST00000102917_5end |
EntrezGene: | Col15a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive organ | 3.43e-09 | 24 |
reproductive structure | 4.02e-09 | 26 |
reproductive system | 4.02e-09 | 26 |
female organism | 6.98e-08 | 11 |
gonad | 1.85e-07 | 18 |
gonad primordium | 1.85e-07 | 18 |
surface structure | 2.53e-07 | 22 |
external genitalia | 3.02e-07 | 17 |
indifferent external genitalia | 3.02e-07 | 17 |
indifferent gonad | 3.02e-07 | 17 |
anatomical cavity | 5.08e-07 | 39 |
body cavity | 5.40e-07 | 37 |
body cavity or lining | 5.40e-07 | 37 |
female reproductive system | 5.92e-07 | 9 |