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FFCP PHASE1:Mm9::chr11:119409058..119409073,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18164
|EntrezGene=18164
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=Q62443
|UniProt=Q62443
|association_with_transcript=0bp_to_ENSMUST00000026670_5end
|association_with_transcript=0bp_to_ENSMUST00000026670_5end
|cluster_id=chr11:119409058..119409073,-
|description=CAGE_peak_1_at_Nptx1_5end
|description=CAGE_peak_1_at_Nptx1_5end
|id=chr11:119409058..119409073,-
|id=chr11:119409058..119409073,-
|ontology_enrichment_celltype=CL:0000117!2.05e-12!23;CL:0000337!2.05e-12!23;CL:0000540!5.84e-07!33;CL:0000047!5.84e-07!33;CL:0000031!5.84e-07!33;CL:0000404!5.84e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,6.99e-19,23;CL:0000337,6.99e-19,23;CL:0000540,2.85e-11,33;CL:0000047,2.85e-11,33;CL:0000031,2.85e-11,33;CL:0000404,2.85e-11,33;CL:0000393,8.72e-11,39;CL:0000211,8.72e-11,39;CL:0000221,6.29e-10,44;CL:0000133,6.29e-10,44;CL:0002319,2.39e-09,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.46e-28!71;UBERON:0003075!1.46e-28!71;UBERON:0007284!1.46e-28!71;UBERON:0000033!4.75e-26!63;UBERON:0001049!9.97e-26!52;UBERON:0005068!9.97e-26!52;UBERON:0006241!9.97e-26!52;UBERON:0007135!9.97e-26!52;UBERON:0004121!1.16e-24!102;UBERON:0000924!1.16e-24!102;UBERON:0006601!1.16e-24!102;UBERON:0000955!2.18e-24!50;UBERON:0006238!2.18e-24!50;UBERON:0002616!9.58e-24!49;UBERON:0003056!6.18e-23!49;UBERON:0000073!1.14e-22!75;UBERON:0001016!1.14e-22!75;UBERON:0001017!1.95e-21!73;UBERON:0005743!1.95e-21!73;UBERON:0003080!4.92e-20!40;UBERON:0002780!2.34e-19!39;UBERON:0001890!2.34e-19!39;UBERON:0006240!2.34e-19!39;UBERON:0002020!8.58e-18!34;UBERON:0002791!9.05e-15!29;UBERON:0003528!9.05e-15!29;UBERON:0001893!9.05e-15!29;UBERON:0007811!4.04e-14!86;UBERON:0000153!3.17e-13!94;UBERON:0000956!1.10e-10!21;UBERON:0001869!1.10e-10!21;UBERON:0000203!1.10e-10!21;UBERON:0000025!4.34e-09!114;UBERON:0002619!1.14e-08!17;UBERON:0002021!1.83e-08!10;UBERON:0000411!1.83e-08!10;UBERON:0001950!1.83e-08!10;UBERON:0004111!5.29e-08!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.83e-44,54;UBERON:0001049,4.56e-42,52;UBERON:0005068,4.56e-42,52;UBERON:0006241,4.56e-42,52;UBERON:0007135,4.56e-42,52;UBERON:0001016,5.62e-40,75;UBERON:0002346,6.69e-40,64;UBERON:0003075,6.69e-40,64;UBERON:0007284,6.69e-40,64;UBERON:0001017,1.05e-37,73;UBERON:0004121,2.26e-36,95;UBERON:0000924,2.26e-36,95;UBERON:0006601,2.26e-36,95;UBERON:0000955,6.26e-36,47;UBERON:0006238,6.26e-36,47;UBERON:0002616,8.62e-35,46;UBERON:0010371,1.26e-34,73;UBERON:0003056,6.19e-32,49;UBERON:0003080,1.38e-31,40;UBERON:0002780,2.29e-30,39;UBERON:0001890,2.29e-30,39;UBERON:0006240,2.29e-30,39;UBERON:0002020,9.29e-29,34;UBERON:0010314,1.97e-25,92;UBERON:0003528,2.91e-23,29;UBERON:0002791,2.91e-23,29;UBERON:0001893,2.91e-23,29;UBERON:0000025,1.27e-17,114;UBERON:0004111,2.38e-16,122;UBERON:0000956,7.65e-16,21;UBERON:0001869,7.65e-16,21;UBERON:0000203,7.65e-16,21;UBERON:0002021,2.89e-14,10;UBERON:0000411,2.89e-14,10;UBERON:0001950,2.89e-14,10;UBERON:0002619,3.24e-12,17;UBERON:0003076,2.66e-10,12;UBERON:0003057,2.66e-10,12;UBERON:0000119,9.80e-10,176;UBERON:0000483,1.78e-09,174;UBERON:0002420,1.35e-08,8;UBERON:0007245,1.35e-08,8;UBERON:0010009,1.35e-08,8;UBERON:0010011,1.35e-08,8;UBERON:0000454,1.35e-08,8;UBERON:0011216,4.85e-08,194;UBERON:0002240,6.00e-08,6;UBERON:0005174,6.00e-08,6;UBERON:0001137,6.00e-08,6;UBERON:0001894,7.94e-08,10;UBERON:0006222,7.94e-08,10
|phase1_expression=0.320297694209588,0,0,0.90739263392049,0.500895729946347,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,7.90902598404949,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,2.26614272356039,3.14268486780495,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,2.83243045203437,2.64495489636016,5.70448263155561,1.0165335962074,0.889294796111139,0,0,0,0,0.384218305321555,2.38486108309499,1.62007125998029,2.73422449756797,8.2838785477103,6.84692476950002,0.489963196859816,0.575072826109418,1.83843757322004,5.50579404996943,15.3224805702225,12.1349161272432,1.58263545276233,3.01909223887952,2.08365348222704,12.2840519560608,3.93933827022176,14.3630352910202,8.54422897873636,6.83384067835694,8.01517617048792,8.93569081331572,3.47629176491213,0.579728977403356,0,0,0,0,0,1.54488862144927,0,0,0,1.83096445709685,0,0,0,0.432982082022428,0,0,1.25602267690966,0,0.742210695324124,1.21439728736295,0.304465478312141,0.691846491768175,0.753613202763113,0.705532242814229,0.376999773989026,0,0,0,0,0,0,0,47.1377083188591,84.6164695526358,0.510914110417183,0.11981512450592,0,0,11.3840885947665,8.23501085073528,1.13088916901578,30.0716073932638,32.475863080952,4.36354893575076,9.73447578406546,0.101839363850316,0.995255764880744,2.77995034277042,0.631325567659422,0.260240885925407,0.689706313300419,1.26043490863744,0.90422890701429,2.65342346690179,1.92170580427275,2.15513966487376,2.32833033665114,0,0.378212160335639,0.351902248327898,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.329119699826961,0,0,0.146199987425332,0.219550115291051,0,46.8946585298004,5.35103984372279,0,0.793351699990633,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0.312037673114561,1.26289438973556,0,0,1.10851914099963,0,0.325929952884052,0.509235257325564,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,1.91345722388985,0.81931657357869,0.172684981865896,0.867894351489069,0,0,0,0.551873492609465,8.66973185934077,9.72856998715286,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,7.06906896127976,0.283880170416537,0.35613120733451,0.162886959353576,1.31976098378028,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,3.74483566329167,1.62054984628179,1.55230420539305,1.92903331528433,0.532020700926821,1.60531935841864,3.1264313914403,2.74018454203139,0.938686832254841,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0,0.874442509889552,19.0988061070825,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.66183396182839,0,0.129159823477731,0,0,0.39061315453185,0.314578033277133,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0.360586348559907,0,0,0,0.201652370273681,0,0.288635524920988,0.350630706544707,0,0.221985953374065,0,0,0.19318959403219,17.0791052660576,1.46521299413812,0,0,16.3778034358949,17.4923589872727,16.6139698897425,19.247556422493,13.0165678756422,18.1294535373528,25.6508550088086,23.8670237708837,20.3914084042892,25.3702552758392,0.207574695168353,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.735374033800057,0,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0.280924522409647,0.832326981263301,0.689225627467359,0,0.927074607558844,0.964546102318525,0.824171801606613,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.376437521661322,0.423073039458382,0.548783918618318,0,0.814824683075171,1.12228454331548,0.711810108745045,0.591026894253381,0.409231043169689,1.08455788830176,0.192906610981141,0.999242311751784,0.467863216890817,0.644613162144895,0,0.441182838239031,0
|phase1_expression=0.320297694209588,0,0,0.90739263392049,0.500895729946347,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,7.90902598404949,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,2.26614272356039,3.14268486780495,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,2.83243045203437,2.64495489636016,5.70448263155561,1.0165335962074,0.889294796111139,0,0,0,0,0.384218305321555,2.38486108309499,1.62007125998029,2.73422449756797,8.2838785477103,6.84692476950002,0.489963196859816,0.575072826109418,1.83843757322004,5.50579404996943,15.3224805702225,12.1349161272432,1.58263545276233,3.01909223887952,2.08365348222704,12.2840519560608,3.93933827022176,14.3630352910202,8.54422897873636,6.83384067835694,8.01517617048792,8.93569081331572,3.47629176491213,0.579728977403356,0,0,0,0,0,1.54488862144927,0,0,0,1.83096445709685,0,0,0,0.432982082022428,0,0,1.25602267690966,0,0.742210695324124,1.21439728736295,0.304465478312141,0.691846491768175,0.753613202763113,0.705532242814229,0.376999773989026,0,0,0,0,0,0,0,47.1377083188591,84.6164695526358,0.510914110417183,0.11981512450592,0,0,11.3840885947665,8.23501085073528,1.13088916901578,30.0716073932638,32.475863080952,4.36354893575076,9.73447578406546,0.101839363850316,0.995255764880744,2.77995034277042,0.631325567659422,0.260240885925407,0.689706313300419,1.26043490863744,0.90422890701429,2.65342346690179,1.92170580427275,2.15513966487376,2.32833033665114,0,0.378212160335639,0.351902248327898,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.329119699826961,0,0,0.146199987425332,0.219550115291051,0,46.8946585298004,5.35103984372279,0,0.793351699990633,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0.312037673114561,1.26289438973556,0,0,1.10851914099963,0,0.325929952884052,0.509235257325564,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,1.91345722388985,0.81931657357869,0.172684981865896,0.867894351489069,0,0,0,0.551873492609465,8.66973185934077,9.72856998715286,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,7.06906896127976,0.283880170416537,0.35613120733451,0.162886959353576,1.31976098378028,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,3.74483566329167,1.62054984628179,1.55230420539305,1.92903331528433,0.532020700926821,1.60531935841864,3.1264313914403,2.74018454203139,0.938686832254841,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0,0.874442509889552,19.0988061070825,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.66183396182839,0,0.129159823477731,0,0,0.39061315453185,0.314578033277133,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0.360586348559907,0,0,0,0.201652370273681,0,0.288635524920988,0.350630706544707,0,0.221985953374065,0,0,0.19318959403219,17.0791052660576,1.46521299413812,0,0,16.3778034358949,17.4923589872727,16.6139698897425,19.247556422493,13.0165678756422,18.1294535373528,25.6508550088086,23.8670237708837,20.3914084042892,25.3702552758392,0.207574695168353,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.735374033800057,0,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0.280924522409647,0.832326981263301,0.689225627467359,0,0.927074607558844,0.964546102318525,0.824171801606613,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.376437521661322,0.423073039458382,0.548783918618318,0,0.814824683075171,1.12228454331548,0.711810108745045,0.591026894253381,0.409231043169689,1.08455788830176,0.192906610981141,0.999242311751784,0.467863216890817,0.644613162144895,0,0.441182838239031,0
|short_description=p1@Nptx1
|short_description=p1@Nptx1
}}
}}

Latest revision as of 02:28, 27 September 2015

Short description:p1@Nptx1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nptx1_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 0bp_to_ENSMUST00000026670_5end
EntrezGene:Nptx1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nptx1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D98.94
Mouse Schwann, donor2.CNhs12573.11746-123F93.48
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B247.14
cerebellum, neonate N30.CNhs11135.1395-42I284.62
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.38
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D530.07
cortex, neonate N30.CNhs11107.1392-42F232.48
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B29.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E846.89
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C28.67
medulla oblongata, neonate N30.CNhs11200.1396-42A39.73
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C919.10
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F517.08
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A625.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A723.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.37
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.99e-1923
neuroblast (sensu Vertebrata)6.99e-1923
neuron2.85e-1133
neuronal stem cell2.85e-1133
neuroblast2.85e-1133
electrically signaling cell2.85e-1133
electrically responsive cell8.72e-1139
electrically active cell8.72e-1139
ectodermal cell6.29e-1044
neurectodermal cell6.29e-1044
neural cell2.39e-0943

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.83e-4454
neural tube4.56e-4252
neural rod4.56e-4252
future spinal cord4.56e-4252
neural keel4.56e-4252
nervous system5.62e-4075
neurectoderm6.69e-4064
neural plate6.69e-4064
presumptive neural plate6.69e-4064
central nervous system1.05e-3773
ectoderm-derived structure2.26e-3695
ectoderm2.26e-3695
presumptive ectoderm2.26e-3695
brain6.26e-3647
future brain6.26e-3647
regional part of brain8.62e-3546
ecto-epithelium1.26e-3473
pre-chordal neural plate6.19e-3249
anterior neural tube1.38e-3140
regional part of forebrain2.29e-3039
forebrain2.29e-3039
future forebrain2.29e-3039
gray matter9.29e-2934
structure with developmental contribution from neural crest1.97e-2592
brain grey matter2.91e-2329
regional part of telencephalon2.91e-2329
telencephalon2.91e-2329
tube1.27e-17114
anatomical conduit2.38e-16122
cerebral cortex7.65e-1621
cerebral hemisphere7.65e-1621
pallium7.65e-1621
occipital lobe2.89e-1410
visual cortex2.89e-1410
neocortex2.89e-1410
regional part of cerebral cortex3.24e-1217
posterior neural tube2.66e-1012
chordal neural plate2.66e-1012
cell layer9.80e-10176
epithelium1.78e-09174
basal ganglion1.35e-088
nuclear complex of neuraxis1.35e-088
aggregate regional part of brain1.35e-088
collection of basal ganglia1.35e-088
cerebral subcortex1.35e-088
organ system subdivision4.85e-08194
spinal cord6.00e-086
dorsal region element6.00e-086
dorsum6.00e-086
diencephalon7.94e-0810
future diencephalon7.94e-0810
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