FFCP PHASE1:Mm9::chr4:56770218..56770235,-: Difference between revisions
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{{FFCP|EntrezGene=230233|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=-61bp_to_ENSMUST00000171411,uc008sxp.2_5end|description=CAGE_peak_4_at_Ikbkap_5end|id=chr4:56770218..56770235,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,1.41e-11,9|ontology_enrichment_disease=DOID:0060100!5.96e-12!3;DOID:4045!5.96e-12!3|ontology_enrichment_disease_v019_2=DOID:0060100,3.61e-33,3;DOID:4045,3.61e-33,3;DOID:0050686,5.29e-17,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.41e-11,9;UBERON:0002036,1.41e-11,9;UBERON:0002385,1.41e-11,9;UBERON:0000486,1.41e-11,9;UBERON:0007503,1.41e-11,9;UBERON:0001015,1.41e-11,9;UBERON:0002329,1.41e-11,9;UBERON:0003082,1.41e-11,9;UBERON:0003059,1.41e-11,9;UBERON:0007282,1.41e-11,9;UBERON:0004290,1.41e-11,9;UBERON:0009618,1.41e-11,9;UBERON:0000383,1.74e-10,10;UBERON:0007524,1.36e-09,11;UBERON:0003077,1.36e-09,11;UBERON:0007285,1.36e-09,11;UBERON:0002204,1.17e-08,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0447591376858,6.2506827561904,8.37637990358077,19.9998705930545,25.2726829434625,10.6812277666854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5384422077995,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0,0.327726629431476,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.854354403989263,0,0.925972636848558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Ikbkap}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=230233 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-61bp_to_ENSMUST00000171411,uc008sxp.2_5end | |||
|cluster_id=chr4:56770218..56770235,- | |||
|description=CAGE_peak_4_at_Ikbkap_5end | |||
|id=chr4:56770218..56770235,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.41e-11,9 | |||
|ontology_enrichment_disease=DOID:0060100!5.96e-12!3;DOID:4045!5.96e-12!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.61e-33,3;DOID:4045,3.61e-33,3;DOID:0050686,5.29e-17,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.41e-11,9;UBERON:0002036,1.41e-11,9;UBERON:0002385,1.41e-11,9;UBERON:0000486,1.41e-11,9;UBERON:0007503,1.41e-11,9;UBERON:0001015,1.41e-11,9;UBERON:0002329,1.41e-11,9;UBERON:0003082,1.41e-11,9;UBERON:0003059,1.41e-11,9;UBERON:0007282,1.41e-11,9;UBERON:0004290,1.41e-11,9;UBERON:0009618,1.41e-11,9;UBERON:0000383,1.74e-10,10;UBERON:0007524,1.36e-09,11;UBERON:0003077,1.36e-09,11;UBERON:0007285,1.36e-09,11;UBERON:0002204,1.17e-08,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0447591376858,6.2506827561904,8.37637990358077,19.9998705930545,25.2726829434625,10.6812277666854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5384422077995,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0,0.327726629431476,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.854354403989263,0,0.925972636848558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Ikbkap | |||
}} |
Latest revision as of 02:47, 27 September 2015
Short description: | p4@Ikbkap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ikbkap_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -61bp_to_ENSMUST00000171411, uc008sxp.2_5end |
EntrezGene: | Ikbkap |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.41e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.41e-11 | 9 |
striated muscle tissue | 1.41e-11 | 9 |
muscle tissue | 1.41e-11 | 9 |
multilaminar epithelium | 1.41e-11 | 9 |
epithelial vesicle | 1.41e-11 | 9 |
musculature | 1.41e-11 | 9 |
somite | 1.41e-11 | 9 |
myotome | 1.41e-11 | 9 |
presomitic mesoderm | 1.41e-11 | 9 |
presumptive segmental plate | 1.41e-11 | 9 |
dermomyotome | 1.41e-11 | 9 |
trunk paraxial mesoderm | 1.41e-11 | 9 |
musculature of body | 1.74e-10 | 10 |
dense mesenchyme tissue | 1.36e-09 | 11 |
paraxial mesoderm | 1.36e-09 | 11 |
presumptive paraxial mesoderm | 1.36e-09 | 11 |
musculoskeletal system | 1.17e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.61e-33 | 3 |
muscle cancer | 3.61e-33 | 3 |
organ system cancer | 5.29e-17 | 6 |