FFCP PHASE1:Mm9::chr4:57447275..57447280,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=242481 | |EntrezGene=242481 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=189 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UZT2 | |UniProt=Q3UZT2 | ||
|association_with_transcript=-66bp_to_ENSMUST00000030049,uc008syf.1_5end | |||
|cluster_id=chr4:57447275..57447280,+ | |||
|description=CAGE_peak_21_at_Palm2_5end | |||
|id=chr4:57447275..57447280,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.35e-17!23;CL:0000337!9.35e-17!23;CL:0002319!1.53e-13!43;CL:0000221!4.07e-13!44;CL:0000133!4.07e-13!44;CL:0000540!4.66e-12!33;CL:0000047!4.66e-12!33;CL:0000031!4.66e-12!33;CL:0000404!4.66e-12!33;CL:0000055!6.34e-11!50;CL:0000393!1.42e-09!39;CL:0000211!1.42e-09!39;CL:0002610!1.27e-07!3;CL:0002612!3.24e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.33e-44,3;CL:0000117,2.52e-16,23;CL:0000337,2.52e-16,23;CL:0000540,1.59e-11,33;CL:0000047,1.59e-11,33;CL:0000031,1.59e-11,33;CL:0000404,1.59e-11,33;CL:0000393,8.12e-10,39;CL:0000211,8.12e-10,39;CL:0002319,6.12e-09,43;CL:0000221,9.58e-09,44;CL:0000133,9.58e-09,44;CL:0002611,1.53e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.68e-26!75;UBERON:0001016!1.68e-26!75;UBERON:0001017!7.22e-26!73;UBERON:0005743!7.22e-26!73;UBERON:0001049!2.52e-23!52;UBERON:0005068!2.52e-23!52;UBERON:0006241!2.52e-23!52;UBERON:0007135!2.52e-23!52;UBERON:0002020!9.76e-21!34;UBERON:0000955!1.49e-20!50;UBERON:0006238!1.49e-20!50;UBERON:0004121!1.77e-19!102;UBERON:0000924!1.77e-19!102;UBERON:0006601!1.77e-19!102;UBERON:0002616!3.65e-19!49;UBERON:0000033!1.23e-17!63;UBERON:0002346!2.54e-16!71;UBERON:0003075!2.54e-16!71;UBERON:0007284!2.54e-16!71;UBERON:0003080!1.82e-14!40;UBERON:0002780!3.24e-13!39;UBERON:0001890!3.24e-13!39;UBERON:0006240!3.24e-13!39;UBERON:0002791!3.55e-13!29;UBERON:0003528!3.55e-13!29;UBERON:0001893!3.55e-13!29;UBERON:0002240!8.21e-13!6;UBERON:0005174!8.21e-13!6;UBERON:0001137!8.21e-13!6;UBERON:0003056!4.65e-12!49;UBERON:0001948!4.30e-11!5;UBERON:0002315!4.30e-11!5;UBERON:0007811!5.33e-11!86;UBERON:0003076!4.09e-10!12;UBERON:0003057!4.09e-10!12;UBERON:0002619!1.69e-09!17;UBERON:0000153!1.80e-09!94;UBERON:0000956!6.52e-09!21;UBERON:0001869!6.52e-09!21;UBERON:0000203!6.52e-09!21;UBERON:0004684!1.27e-07!3;UBERON:0002275!1.27e-07!3;UBERON:0000025!1.90e-07!114;UBERON:0002257!3.24e-07!3;UBERON:0004111!3.27e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.33e-44,3;UBERON:0002275,2.33e-44,3;UBERON:0001851,1.86e-15,1;UBERON:0005889,1.86e-15,1;UBERON:0001948,1.24e-12,5;UBERON:0002315,1.24e-12,5;UBERON:0002240,1.07e-10,6;UBERON:0005174,1.07e-10,6;UBERON:0001137,1.07e-10,6;UBERON:0002256,1.53e-08,2;UBERON:0000073,3.45e-07,54 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0.420649922702764,1.42825492201902,0.883474163806454,0.244981598429908,0.287536413054709,0,1.10115880999389,2.42605942361857,1.99688493233117,0.131886287730194,0.457438218012048,0,0.279182999001381,0,0.45839474333043,1.47314292736834,0.854230084794618,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.599162557619291,0.457500602818626,0,0,1.02286182932132,0.83115217823824,0.324482526135515,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.515559547031063,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0.420649922702764,1.42825492201902,0.883474163806454,0.244981598429908,0.287536413054709,0,1.10115880999389,2.42605942361857,1.99688493233117,0.131886287730194,0.457438218012048,0,0.279182999001381,0,0.45839474333043,1.47314292736834,0.854230084794618,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.599162557619291,0.457500602818626,0,0,1.02286182932132,0.83115217823824,0.324482526135515,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.515559547031063,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p21@Palm2 | |||
}} | }} |
Latest revision as of 02:57, 27 September 2015
Short description: | p21@Palm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_Palm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | -66bp_to_ENSMUST00000030049, uc008syf.1_5end |
EntrezGene: | Palm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.33e-44 | 3 |
CNS neuron (sensu Vertebrata) | 2.52e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.52e-16 | 23 |
neuron | 1.59e-11 | 33 |
neuronal stem cell | 1.59e-11 | 33 |
neuroblast | 1.59e-11 | 33 |
electrically signaling cell | 1.59e-11 | 33 |
electrically responsive cell | 8.12e-10 | 39 |
electrically active cell | 8.12e-10 | 39 |
neural cell | 6.12e-09 | 43 |
ectodermal cell | 9.58e-09 | 44 |
neurectodermal cell | 9.58e-09 | 44 |
neuron of the dorsal spinal cord | 1.53e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.33e-44 | 3 |
reticular formation | 2.33e-44 | 3 |
cortex | 1.86e-15 | 1 |
zygote cortex | 1.86e-15 | 1 |
regional part of spinal cord | 1.24e-12 | 5 |
gray matter of spinal cord | 1.24e-12 | 5 |
spinal cord | 1.07e-10 | 6 |
dorsal region element | 1.07e-10 | 6 |
dorsum | 1.07e-10 | 6 |
dorsal horn of spinal cord | 1.53e-08 | 2 |
regional part of nervous system | 3.45e-07 | 54 |