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FFCP PHASE1:Mm9::chr11:16157709..16157811,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:16157709..16157811,+
|DHSsupport=NA
|short_description=p1@Vstm2a
|DPIdataset=NA
|description=CAGE_peak_1_at_Vstm2a_5end
|association_with_transcript=0bp_to_ENSMUST00000093308,ENSMUST00000109645,ENSMUST00000109647,NM_145967,uc007ibk.2_5end
|EntrezGene=211739
|EntrezGene=211739
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8R0A6,F6Y6A6
|UniProt=Q8R0A6,F6Y6A6
|association_with_transcript=0bp_to_ENSMUST00000093308,ENSMUST00000109645,ENSMUST00000109647,NM_145967,uc007ibk.2_5end
|cluster_id=chr11:16157709..16157811,+
|description=CAGE_peak_1_at_Vstm2a_5end
|id=chr11:16157709..16157811,+
|ontology_enrichment_celltype=CL:0000117!3.32e-12!23;CL:0000337!3.32e-12!23;CL:0000540!1.03e-11!33;CL:0000047!1.03e-11!33;CL:0000031!1.03e-11!33;CL:0000404!1.03e-11!33;CL:0002319!2.68e-11!43;CL:0000221!2.81e-11!44;CL:0000133!2.81e-11!44;CL:0000393!1.11e-10!39;CL:0000211!1.11e-10!39;CL:0000055!5.52e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000117,9.39e-15,23;CL:0000337,9.39e-15,23;CL:0002319,1.55e-11,43;CL:0000540,3.08e-11,33;CL:0000047,3.08e-11,33;CL:0000031,3.08e-11,33;CL:0000404,3.08e-11,33;CL:0000221,5.42e-11,44;CL:0000133,5.42e-11,44;CL:0000393,9.42e-10,39;CL:0000211,9.42e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.70e-29!75;UBERON:0001016!2.70e-29!75;UBERON:0001017!7.27e-29!73;UBERON:0005743!7.27e-29!73;UBERON:0001049!2.93e-25!52;UBERON:0005068!2.93e-25!52;UBERON:0006241!2.93e-25!52;UBERON:0007135!2.93e-25!52;UBERON:0000955!5.35e-24!50;UBERON:0006238!5.35e-24!50;UBERON:0000033!2.37e-23!63;UBERON:0002616!2.47e-23!49;UBERON:0004121!8.99e-23!102;UBERON:0000924!8.99e-23!102;UBERON:0006601!8.99e-23!102;UBERON:0002346!6.89e-22!71;UBERON:0003075!6.89e-22!71;UBERON:0007284!6.89e-22!71;UBERON:0003056!3.92e-20!49;UBERON:0003080!4.83e-20!40;UBERON:0002020!2.02e-19!34;UBERON:0002780!2.90e-19!39;UBERON:0001890!2.90e-19!39;UBERON:0006240!2.90e-19!39;UBERON:0002791!1.67e-16!29;UBERON:0003528!1.67e-16!29;UBERON:0001893!1.67e-16!29;UBERON:0007811!8.86e-14!86;UBERON:0000956!6.78e-12!21;UBERON:0001869!6.78e-12!21;UBERON:0000203!6.78e-12!21;UBERON:0000153!3.03e-11!94;UBERON:0002619!5.59e-11!17;UBERON:0002021!4.17e-08!10;UBERON:0000411!4.17e-08!10;UBERON:0001950!4.17e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.21e-33,75;UBERON:0000073,7.68e-33,54;UBERON:0001017,1.46e-32,73;UBERON:0001049,2.54e-31,52;UBERON:0005068,2.54e-31,52;UBERON:0006241,2.54e-31,52;UBERON:0007135,2.54e-31,52;UBERON:0002346,1.68e-29,64;UBERON:0003075,1.68e-29,64;UBERON:0007284,1.68e-29,64;UBERON:0000955,2.68e-27,47;UBERON:0006238,2.68e-27,47;UBERON:0004121,1.66e-26,95;UBERON:0000924,1.66e-26,95;UBERON:0006601,1.66e-26,95;UBERON:0002616,1.74e-26,46;UBERON:0003080,1.77e-24,40;UBERON:0003056,3.52e-24,49;UBERON:0010371,3.82e-24,73;UBERON:0002020,1.04e-23,34;UBERON:0002780,1.64e-23,39;UBERON:0001890,1.64e-23,39;UBERON:0006240,1.64e-23,39;UBERON:0003528,4.37e-20,29;UBERON:0002791,4.37e-20,29;UBERON:0001893,4.37e-20,29;UBERON:0010314,6.65e-15,92;UBERON:0000956,2.27e-14,21;UBERON:0001869,2.27e-14,21;UBERON:0000203,2.27e-14,21;UBERON:0002619,3.11e-13,17;UBERON:0002021,1.12e-09,10;UBERON:0000411,1.12e-09,10;UBERON:0001950,1.12e-09,10;UBERON:0000025,4.95e-08,114;UBERON:0003076,3.27e-07,12;UBERON:0003057,3.27e-07,12;UBERON:0002420,6.71e-07,8;UBERON:0007245,6.71e-07,8;UBERON:0010009,6.71e-07,8;UBERON:0010011,6.71e-07,8;UBERON:0000454,6.71e-07,8;UBERON:0004111,7.23e-07,122
|phase1_expression=11.0502704502308,0,0,0,0,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3048268642928,0,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.755380907853464,1.31790010585369,1.28482726513177,0,1.30815093828268,3.29529274101708,5.24960727500565,1.39986421625363,0,0,0.725362142011344,0,0.257259436035947,0,1.03134418455488,20.636279007679,23.2756030879694,10.1413024560989,1.0165335962074,0.889294796111139,0,0,0,1.79760066311043,1.15265491596466,2.07379224616955,3.37514845829227,2.10324961351382,33.9924671440526,33.3511496836936,17.3936934885235,15.0477389498631,22.0612508786405,62.7660521696516,63.0775450140827,72.6558902302032,18.5959665699573,20.3102568797349,22.9201883044974,73.4251287373632,56.276261003168,77.4687116228427,48.0244594322078,53.8164953420609,32.8063024652529,1.74170244666323,3.40072020480535,0,0,0,0,0,0,3.7919993435573,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,2.62622923353838,0,0.445326417194474,0,0.608930956624282,0,0,0.470354828542819,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,16.9812862266697,12.3573557019938,0,0,0,0.254140454146129,125.224974542432,88.7551169468135,61.9475955916422,109.335497400942,116.09481762797,88.5177069823726,102.860960784958,4.78645010096487,0.373220911830279,0.252722758433675,9.89076722666428,0,1.14951052216736,1.0803727788321,0.753524089178575,1.63287597963187,1.92170580427275,2.34254311399322,26.6464471861186,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.696504333044333,0,1.79130840136644,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,107.668453664833,23.153537785339,0,0.264450566663544,0,0.464473343720877,1.03093969057675,0.605050573870028,0.889512175379481,0.570676878337677,0,1.15289268306808,0.502670417600539,0.795825888164603,0.38992817423824,0,0,0.199141273254367,0,0,0,0.203651327845314,0.775809948670503,0.911765658574141,2.52946148497029,5.31396532726568,7.53593893638599,5.55287237648102,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58654466233247,0.37898282354097,0,0,0,0,0.714130922658041,0.585400943573396,0.788175720530955,1.32878813789265,1.2756381492599,1.47476983244164,1.89953480052485,2.74833211304872,0,0,0,0,92.9587916029315,88.7292467502978,0,0.252470927204373,0.631016438832513,1.17131623288992,0.861693590931196,1.19484398976276,0.891194696329576,1.13230612315533,0.404810701674894,0.584511715822624,1.58115111178609,65.8708698664704,0.709700426041343,2.84904965867608,4.23506094319298,1.15479086080775,0,0,0,0,0,0,0.258428293168221,0,1.06949213515416,0,0,0,10.5536277783674,1.26042765821917,2.06973894052407,2.57204442037911,3.72414490648775,3.56737635204141,4.77192159746151,2.43571959291679,0,0,0,0.8244312647074,0.484393280087717,0.663442174209714,0.358117032009409,0,0,108.288376374138,0,0.412773735926445,0,0,0,0,0,0,0,0.954670618015114,0.790839983952838,0.406638934253697,0.432021363287205,0.627264888043406,0.436725127492355,0.404593039154462,0.330613822901344,0,0.259229946583586,0,4.50954350947352,0.149516546043979,0,0.194451188344048,0.516639293910924,1.01373675294467,0.234714477291508,1.43224823328345,0.209718688851422,0.966336483304024,1.44015003128933,0.316011120628178,1.01362607645082,0.513554785824136,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.403865799792591,0.0762068066549998,0.201652370273681,0.292373642219257,0.192423683280659,0.116876902181569,0.226730383615211,0.221985953374065,0,0,0.386379188064381,0.375364950902364,1.28206136987086,0.643105137237198,0,101.090579828455,93.4460230109569,97.9651327981368,87.8169761776244,102.077295445826,92.1580554815435,93.1531050319892,101.772591928674,91.5347666148093,100.445500479853,0.103787347584177,1.19707462020309,3.41467211508268,3.64660075602441,2.51535795153579,3.49302666055027,6.44515510624684,5.97501665992793,6.09746498224449,7.58091635291392,5.57654459758527,7.35642731405697,5.99305647807247,6.85069130732101,7.3517400263185,6.19181798667996,7.06894388263618,9.06673336179414,6.59337441285291,7.21274708658547,5.14303878578123,5.85670160325814,5.96090474868302,6.24989591519013,6.86998477031913,7.86915853392591,5.85369513192872,8.15516105457313,7.33342214767654,7.85599180320834,5.21994079746366,5.31924204828043,6.54769669071503,7.12709469455443,3.85813221962283,10.2422336954558,7.48581147025307,6.44613162144895,4.20834330551455,2.8676884485537,3.47801753430632
|phase1_expression=11.0502704502308,0,0,0,0,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3048268642928,0,0,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.755380907853464,1.31790010585369,1.28482726513177,0,1.30815093828268,3.29529274101708,5.24960727500565,1.39986421625363,0,0,0.725362142011344,0,0.257259436035947,0,1.03134418455488,20.636279007679,23.2756030879694,10.1413024560989,1.0165335962074,0.889294796111139,0,0,0,1.79760066311043,1.15265491596466,2.07379224616955,3.37514845829227,2.10324961351382,33.9924671440526,33.3511496836936,17.3936934885235,15.0477389498631,22.0612508786405,62.7660521696516,63.0775450140827,72.6558902302032,18.5959665699573,20.3102568797349,22.9201883044974,73.4251287373632,56.276261003168,77.4687116228427,48.0244594322078,53.8164953420609,32.8063024652529,1.74170244666323,3.40072020480535,0,0,0,0,0,0,3.7919993435573,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,2.62622923353838,0,0.445326417194474,0,0.608930956624282,0,0,0.470354828542819,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,16.9812862266697,12.3573557019938,0,0,0,0.254140454146129,125.224974542432,88.7551169468135,61.9475955916422,109.335497400942,116.09481762797,88.5177069823726,102.860960784958,4.78645010096487,0.373220911830279,0.252722758433675,9.89076722666428,0,1.14951052216736,1.0803727788321,0.753524089178575,1.63287597963187,1.92170580427275,2.34254311399322,26.6464471861186,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0.696504333044333,0,1.79130840136644,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,107.668453664833,23.153537785339,0,0.264450566663544,0,0.464473343720877,1.03093969057675,0.605050573870028,0.889512175379481,0.570676878337677,0,1.15289268306808,0.502670417600539,0.795825888164603,0.38992817423824,0,0,0.199141273254367,0,0,0,0.203651327845314,0.775809948670503,0.911765658574141,2.52946148497029,5.31396532726568,7.53593893638599,5.55287237648102,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58654466233247,0.37898282354097,0,0,0,0,0.714130922658041,0.585400943573396,0.788175720530955,1.32878813789265,1.2756381492599,1.47476983244164,1.89953480052485,2.74833211304872,0,0,0,0,92.9587916029315,88.7292467502978,0,0.252470927204373,0.631016438832513,1.17131623288992,0.861693590931196,1.19484398976276,0.891194696329576,1.13230612315533,0.404810701674894,0.584511715822624,1.58115111178609,65.8708698664704,0.709700426041343,2.84904965867608,4.23506094319298,1.15479086080775,0,0,0,0,0,0,0.258428293168221,0,1.06949213515416,0,0,0,10.5536277783674,1.26042765821917,2.06973894052407,2.57204442037911,3.72414490648775,3.56737635204141,4.77192159746151,2.43571959291679,0,0,0,0.8244312647074,0.484393280087717,0.663442174209714,0.358117032009409,0,0,108.288376374138,0,0.412773735926445,0,0,0,0,0,0,0,0.954670618015114,0.790839983952838,0.406638934253697,0.432021363287205,0.627264888043406,0.436725127492355,0.404593039154462,0.330613822901344,0,0.259229946583586,0,4.50954350947352,0.149516546043979,0,0.194451188344048,0.516639293910924,1.01373675294467,0.234714477291508,1.43224823328345,0.209718688851422,0.966336483304024,1.44015003128933,0.316011120628178,1.01362607645082,0.513554785824136,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.403865799792591,0.0762068066549998,0.201652370273681,0.292373642219257,0.192423683280659,0.116876902181569,0.226730383615211,0.221985953374065,0,0,0.386379188064381,0.375364950902364,1.28206136987086,0.643105137237198,0,101.090579828455,93.4460230109569,97.9651327981368,87.8169761776244,102.077295445826,92.1580554815435,93.1531050319892,101.772591928674,91.5347666148093,100.445500479853,0.103787347584177,1.19707462020309,3.41467211508268,3.64660075602441,2.51535795153579,3.49302666055027,6.44515510624684,5.97501665992793,6.09746498224449,7.58091635291392,5.57654459758527,7.35642731405697,5.99305647807247,6.85069130732101,7.3517400263185,6.19181798667996,7.06894388263618,9.06673336179414,6.59337441285291,7.21274708658547,5.14303878578123,5.85670160325814,5.96090474868302,6.24989591519013,6.86998477031913,7.86915853392591,5.85369513192872,8.15516105457313,7.33342214767654,7.85599180320834,5.21994079746366,5.31924204828043,6.54769669071503,7.12709469455443,3.85813221962283,10.2422336954558,7.48581147025307,6.44613162144895,4.20834330551455,2.8676884485537,3.47801753430632
|short_description=p1@Vstm2a
}}
}}

Latest revision as of 04:05, 27 September 2015

Short description:p1@Vstm2a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vstm2a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000093308, ENSMUST00000109645, ENSMUST00000109647, NM_145967, uc007ibk.2_5end
EntrezGene:Vstm2a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vstm2a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C320.64
Mouse Granule cells, donor2.CNhs12357.11731-123E323.28
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F133.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D533.35
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D362.77
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F363.08
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D772.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.60
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.92
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E473.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E556.28
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I677.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D648.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F653.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E132.81
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F93.40
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B216.98
cerebellum, neonate N30.CNhs11135.1395-42I212.36
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A4125.22
corpus striatum, adult.CNhs10487.19-21D888.76
corpus striatum, neonate N00.CNhs11226.630-43F161.95
cortex, adult.CNhs10473.12-14D5109.34
cortex, neonate N30.CNhs11107.1392-42F2116.09
diencephalon, adult.CNhs10482.20-12F288.52
diencephalon, neonate N30.CNhs11201.1388-42B2102.86
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G49.89
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A226.65
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8107.67
hippocampus, neonate N00.CNhs11228.627-43G123.15
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D52.53
kidney, neonate N20.CNhs11113.832-19I15.31
kidney, neonate N25.CNhs11122.1353-25F37.54
kidney, neonate N30.CNhs11203.1385-42H15.55
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H22.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C292.96
medulla oblongata, neonate N30.CNhs11200.1396-42A388.73
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I965.87
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I44.24
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C9108.29
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1101.09
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A293.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A397.97
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D787.82
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4102.08
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A592.16
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A693.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7101.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A891.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9100.45
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.07
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.87
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.13
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.39e-1523
neuroblast (sensu Vertebrata)9.39e-1523
neural cell1.55e-1143
neuron3.08e-1133
neuronal stem cell3.08e-1133
neuroblast3.08e-1133
electrically signaling cell3.08e-1133
ectodermal cell5.42e-1144
neurectodermal cell5.42e-1144
electrically responsive cell9.42e-1039
electrically active cell9.42e-1039

Uber anatomy
Ontology termp-valuen
nervous system4.21e-3375
regional part of nervous system7.68e-3354
central nervous system1.46e-3273
neural tube2.54e-3152
neural rod2.54e-3152
future spinal cord2.54e-3152
neural keel2.54e-3152
neurectoderm1.68e-2964
neural plate1.68e-2964
presumptive neural plate1.68e-2964
brain2.68e-2747
future brain2.68e-2747
ectoderm-derived structure1.66e-2695
ectoderm1.66e-2695
presumptive ectoderm1.66e-2695
regional part of brain1.74e-2646
anterior neural tube1.77e-2440
pre-chordal neural plate3.52e-2449
ecto-epithelium3.82e-2473
gray matter1.04e-2334
regional part of forebrain1.64e-2339
forebrain1.64e-2339
future forebrain1.64e-2339
brain grey matter4.37e-2029
regional part of telencephalon4.37e-2029
telencephalon4.37e-2029
structure with developmental contribution from neural crest6.65e-1592
cerebral cortex2.27e-1421
cerebral hemisphere2.27e-1421
pallium2.27e-1421
regional part of cerebral cortex3.11e-1317
occipital lobe1.12e-0910
visual cortex1.12e-0910
neocortex1.12e-0910
tube4.95e-08114
posterior neural tube3.27e-0712
chordal neural plate3.27e-0712
basal ganglion6.71e-078
nuclear complex of neuraxis6.71e-078
aggregate regional part of brain6.71e-078
collection of basal ganglia6.71e-078
cerebral subcortex6.71e-078
anatomical conduit7.23e-07122
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