FFCP PHASE1:Mm9::chr15:81767341..81767364,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=105859 | |EntrezGene=105859 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2158 | |||
|TSSclassifier=NA | |||
|UniProt=D3YTN0 | |UniProt=D3YTN0 | ||
|association_with_transcript=-47bp_to_ENSMUST00000135663_5end | |association_with_transcript=-47bp_to_ENSMUST00000135663_5end | ||
|cluster_id=chr15:81767341..81767364,+ | |||
|description=CAGE_peak_3_at_Csdc2_5end | |description=CAGE_peak_3_at_Csdc2_5end | ||
|id=chr15:81767341..81767364,+ | |id=chr15:81767341..81767364,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.60e-17!43;CL:0000221!1.61e-17!44;CL:0000133!1.61e-17!44;CL:0000055!4.10e-13!50;CL:0000540!8.10e-13!33;CL:0000047!8.10e-13!33;CL:0000031!8.10e-13!33;CL:0000404!8.10e-13!33;CL:0000117!1.46e-11!23;CL:0000337!1.46e-11!23;CL:0000393!1.83e-09!39;CL:0000211!1.83e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.01e-21,43;CL:0000221,2.47e-20,44;CL:0000133,2.47e-20,44;CL:0000540,7.16e-15,33;CL:0000047,7.16e-15,33;CL:0000031,7.16e-15,33;CL:0000404,7.16e-15,33;CL:0000117,9.71e-15,23;CL:0000337,9.71e-15,23;CL:0000393,3.95e-11,39;CL:0000211,3.95e-11,39;CL:0002321,3.22e-08,70;CL:0002453,9.29e-08,8;CL:0000333,2.92e-07,10;CL:0000095,2.92e-07,10;CL:0000243,2.92e-07,10;CL:0000123,2.92e-07,10;CL:0000125,2.92e-07,10;CL:0000030,2.92e-07,10;CL:0000339,2.92e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.37e-32!102;UBERON:0000924!2.37e-32!102;UBERON:0006601!2.37e-32!102;UBERON:0000073!6.52e-29!75;UBERON:0001016!6.52e-29!75;UBERON:0001017!1.11e-28!73;UBERON:0005743!1.11e-28!73;UBERON:0002346!2.22e-25!71;UBERON:0003075!2.22e-25!71;UBERON:0007284!2.22e-25!71;UBERON:0000033!1.03e-20!63;UBERON:0001049!7.90e-20!52;UBERON:0005068!7.90e-20!52;UBERON:0006241!7.90e-20!52;UBERON:0007135!7.90e-20!52;UBERON:0000955!7.52e-18!50;UBERON:0006238!7.52e-18!50;UBERON:0002616!4.07e-17!49;UBERON:0003056!7.02e-15!49;UBERON:0002020!6.96e-14!34;UBERON:0003080!9.20e-12!40;UBERON:0002780!3.58e-11!39;UBERON:0001890!3.58e-11!39;UBERON:0006240!3.58e-11!39;UBERON:0002791!1.86e-10!29;UBERON:0003528!1.86e-10!29;UBERON:0001893!1.86e-10!29;UBERON:0003076!1.07e-09!12;UBERON:0003057!1.07e-09!12;UBERON:0007811!2.83e-08!86;UBERON:0000153!1.76e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-31,75;UBERON:0001017,1.80e-31,73;UBERON:0004121,3.32e-30,95;UBERON:0000924,3.32e-30,95;UBERON:0006601,3.32e-30,95;UBERON:0002346,3.91e-24,64;UBERON:0003075,3.91e-24,64;UBERON:0007284,3.91e-24,64;UBERON:0000073,2.03e-22,54;UBERON:0010371,6.51e-22,73;UBERON:0001049,3.98e-21,52;UBERON:0005068,3.98e-21,52;UBERON:0006241,3.98e-21,52;UBERON:0007135,3.98e-21,52;UBERON:0010314,5.10e-20,92;UBERON:0002020,9.48e-17,34;UBERON:0000955,1.80e-16,47;UBERON:0006238,1.80e-16,47;UBERON:0002616,1.50e-15,46;UBERON:0003076,2.74e-13,12;UBERON:0003057,2.74e-13,12;UBERON:0003056,2.96e-13,49;UBERON:0003528,4.77e-12,29;UBERON:0002791,4.77e-12,29;UBERON:0001893,4.77e-12,29;UBERON:0003080,8.85e-11,40;UBERON:0002780,4.72e-10,39;UBERON:0001890,4.72e-10,39;UBERON:0006240,4.72e-10,39;UBERON:0002420,1.06e-07,8;UBERON:0007245,1.06e-07,8;UBERON:0010009,1.06e-07,8;UBERON:0010011,1.06e-07,8;UBERON:0000454,1.06e-07,8;UBERON:0002240,1.18e-07,6;UBERON:0005174,1.18e-07,6;UBERON:0001137,1.18e-07,6;UBERON:0004733,3.72e-07,6;UBERON:0004732,3.72e-07,6;UBERON:0002028,3.72e-07,6;UBERON:0007277,3.72e-07,6 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0830441982647,5.01457859675027,5.4921545683618,5.24960727500565,1.25987779462826,2.87505128729943,0,0,0,0,0.286533439938757,0.515672092277442,6.87875966922632,4.7609188134483,7.60597684207415,1.35537812827653,0.889294796111139,0,0,0,5.69240209984969,8.06858441175265,0.829516898467821,0.405017814995072,2.10324961351382,8.85518051651791,12.1477697523387,2.57230678351403,2.20444583341944,0,2.20231761998777,4.72443150915195,4.14737639791857,4.3522474950964,7.04454855738554,7.29278718779464,7.53794097303729,5.6276261003168,2.13917546887534,11.490514833473,8.54230084794618,9.50637173709033,0.227178579999552,2.72057616384428,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,1.03909497345377,1.21439728736295,3.04465478312141,0.922461989024234,1.65794904607885,1.41106448562846,0.251333182659351,0.494389935468748,0.722996784599558,0,0,0,0,0,7.90508151931177,7.95897485891129,0,0,0,0,6.74057877321702,2.28750301409313,3.26701315493447,1.73824320192276,1.27857728665165,5.194701113989,3.56930778749067,1.83310854930569,0.373220911830279,0,0.841767423545896,0.260240885925407,0.689706313300419,3.78130472591233,3.31550599238573,4.35433594568498,4.22775276940004,5.24729657534481,5.17406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.556094498451196,0.696504333044333,0,1.99034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.493679549740441,0,2.67527071501324,4.09359964790931,1.3173006917463,5.2340503316545,0.420579897128254,4.01327988279209,0,0,0.639864751605702,0.232236671860439,0.257734922644187,1.00841762311671,0.667134131534611,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0.758671603812327,1.02823661348756,0,0.814605311381257,0.387904974335251,0.701358198903186,0.189709611372772,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0.744281895337007,0,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0,0.163863314715738,0,0.433947175744535,0,0,0,0,5.9403718295483,6.21221938938677,0,0,0.315508219416257,1.17131623288992,1.93881057959519,0.477937595905104,1.11399337041197,1.41538265394416,1.21443210502468,0.584511715822624,2.37172666767914,13.4954952897159,0.709700426041343,1.78065603667255,1.79175655288934,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0.680879211507576,0.36012218806262,0.388076051348264,0.214337035031592,0.177340233642274,0.713475270408282,0.987294123612726,3.95804433848979,0.23467170806371,0,0.220528398054962,0.8244312647074,0,0.301564624640779,1.43246812803764,1.47726809770555,0.291480836629851,7.6024373824309,0.170870880797853,1.23832120777933,0.555583582109135,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.324016022465404,0.627264888043406,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0,0.56369293868419,2.99033092087958,2.31641886639937,1.36115831840833,0.387479470433193,0.844780627453891,1.29092962510329,1.17183946359555,1.8874681996628,0.483168241652012,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0,0,0,0.386379188064381,0.187682475451182,0.73260649706906,0.214368379079066,0,1.6942555278512,1.38097570952153,3.43737308063638,1.71853182343688,0.685082519770642,1.5107877947794,3.37511250115903,1.35096360967266,1.81256963593682,1.03552062350364,1.03787347584177,0.399024873401031,0.512200817262403,0.972426868273176,1.04806581313991,2.20612210140017,1.55572709461131,0.412070114477788,0.64183841918363,0.252697211763798,2.28131369901216,1.69763707247469,1.31098110457835,1.6646539625266,1.32101578597911,1.90517476513229,1.50649623728312,0.38581844092741,2.06042950401653,1.17759136107518,1.71434626192708,0.70990322463735,0.715308569841963,0.872078499793971,1.31753132581463,0.930760686808441,1.09756783723664,0.789209134313529,1.35804113845862,0,0.830445126869219,0.985044823755635,1.22769312950907,1.23949472948773,0.771626443924566,3.99696924700713,0.233931608445408,1.07435527024149,1.14772999241306,0.661774257358546,0 | |phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0830441982647,5.01457859675027,5.4921545683618,5.24960727500565,1.25987779462826,2.87505128729943,0,0,0,0,0.286533439938757,0.515672092277442,6.87875966922632,4.7609188134483,7.60597684207415,1.35537812827653,0.889294796111139,0,0,0,5.69240209984969,8.06858441175265,0.829516898467821,0.405017814995072,2.10324961351382,8.85518051651791,12.1477697523387,2.57230678351403,2.20444583341944,0,2.20231761998777,4.72443150915195,4.14737639791857,4.3522474950964,7.04454855738554,7.29278718779464,7.53794097303729,5.6276261003168,2.13917546887534,11.490514833473,8.54230084794618,9.50637173709033,0.227178579999552,2.72057616384428,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,1.03909497345377,1.21439728736295,3.04465478312141,0.922461989024234,1.65794904607885,1.41106448562846,0.251333182659351,0.494389935468748,0.722996784599558,0,0,0,0,0,7.90508151931177,7.95897485891129,0,0,0,0,6.74057877321702,2.28750301409313,3.26701315493447,1.73824320192276,1.27857728665165,5.194701113989,3.56930778749067,1.83310854930569,0.373220911830279,0,0.841767423545896,0.260240885925407,0.689706313300419,3.78130472591233,3.31550599238573,4.35433594568498,4.22775276940004,5.24729657534481,5.17406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.556094498451196,0.696504333044333,0,1.99034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.493679549740441,0,2.67527071501324,4.09359964790931,1.3173006917463,5.2340503316545,0.420579897128254,4.01327988279209,0,0,0.639864751605702,0.232236671860439,0.257734922644187,1.00841762311671,0.667134131534611,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0.758671603812327,1.02823661348756,0,0.814605311381257,0.387904974335251,0.701358198903186,0.189709611372772,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0.744281895337007,0,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0,0.163863314715738,0,0.433947175744535,0,0,0,0,5.9403718295483,6.21221938938677,0,0,0.315508219416257,1.17131623288992,1.93881057959519,0.477937595905104,1.11399337041197,1.41538265394416,1.21443210502468,0.584511715822624,2.37172666767914,13.4954952897159,0.709700426041343,1.78065603667255,1.79175655288934,0.659880491890142,0,0.242780636154981,0,0.377210159511796,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0.680879211507576,0.36012218806262,0.388076051348264,0.214337035031592,0.177340233642274,0.713475270408282,0.987294123612726,3.95804433848979,0.23467170806371,0,0.220528398054962,0.8244312647074,0,0.301564624640779,1.43246812803764,1.47726809770555,0.291480836629851,7.6024373824309,0.170870880797853,1.23832120777933,0.555583582109135,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.324016022465404,0.627264888043406,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0,0.56369293868419,2.99033092087958,2.31641886639937,1.36115831840833,0.387479470433193,0.844780627453891,1.29092962510329,1.17183946359555,1.8874681996628,0.483168241652012,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0,0,0,0.386379188064381,0.187682475451182,0.73260649706906,0.214368379079066,0,1.6942555278512,1.38097570952153,3.43737308063638,1.71853182343688,0.685082519770642,1.5107877947794,3.37511250115903,1.35096360967266,1.81256963593682,1.03552062350364,1.03787347584177,0.399024873401031,0.512200817262403,0.972426868273176,1.04806581313991,2.20612210140017,1.55572709461131,0.412070114477788,0.64183841918363,0.252697211763798,2.28131369901216,1.69763707247469,1.31098110457835,1.6646539625266,1.32101578597911,1.90517476513229,1.50649623728312,0.38581844092741,2.06042950401653,1.17759136107518,1.71434626192708,0.70990322463735,0.715308569841963,0.872078499793971,1.31753132581463,0.930760686808441,1.09756783723664,0.789209134313529,1.35804113845862,0,0.830445126869219,0.985044823755635,1.22769312950907,1.23949472948773,0.771626443924566,3.99696924700713,0.233931608445408,1.07435527024149,1.14772999241306,0.661774257358546,0 | ||
|short_description=p3@Csdc2 | |short_description=p3@Csdc2 | ||
}} | }} |
Latest revision as of 04:29, 27 September 2015
Short description: | p3@Csdc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Csdc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2158 |
Association with transcript: | -47bp_to_ENSMUST00000135663_5end |
EntrezGene: | Csdc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.01e-21 | 43 |
ectodermal cell | 2.47e-20 | 44 |
neurectodermal cell | 2.47e-20 | 44 |
neuron | 7.16e-15 | 33 |
neuronal stem cell | 7.16e-15 | 33 |
neuroblast | 7.16e-15 | 33 |
electrically signaling cell | 7.16e-15 | 33 |
CNS neuron (sensu Vertebrata) | 9.71e-15 | 23 |
neuroblast (sensu Vertebrata) | 9.71e-15 | 23 |
electrically responsive cell | 3.95e-11 | 39 |
electrically active cell | 3.95e-11 | 39 |
embryonic cell | 3.22e-08 | 70 |
oligodendrocyte precursor cell | 9.29e-08 | 8 |
migratory neural crest cell | 2.92e-07 | 10 |
neuron associated cell | 2.92e-07 | 10 |
glial cell (sensu Vertebrata) | 2.92e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.92e-07 | 10 |
glial cell | 2.92e-07 | 10 |
glioblast | 2.92e-07 | 10 |
glioblast (sensu Vertebrata) | 2.92e-07 | 10 |