FFCP PHASE1:Mm9::chr1:5073186..5073241,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108664 | |EntrezGene=108664 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BVE3,Q3U9S9 | |UniProt=Q8BVE3,Q3U9S9 | ||
|association_with_transcript=-12bp_to_ENSMUST00000044369,NM_133826,uc007afm.1,uc007afn.1_5end | |association_with_transcript=-12bp_to_ENSMUST00000044369,NM_133826,uc007afm.1,uc007afn.1_5end | ||
|cluster_id=chr1:5073186..5073241,+ | |||
|description=CAGE_peak_1_at_Atp6v1h_5end | |description=CAGE_peak_1_at_Atp6v1h_5end | ||
|id=chr1:5073186..5073241,+ | |id=chr1:5073186..5073241,+ | ||
|ontology_enrichment_celltype=CL:0000393!2.21e-14!39;CL:0000211!2.21e-14!39;CL:0000540!2.98e-12!33;CL:0000047!2.98e-12!33;CL:0000031!2.98e-12!33;CL:0000404!2.98e-12!33;CL:0000117!1.60e-11!23;CL:0000337!1.60e-11!23;CL:0000055!2.13e-09!50;CL:0002321!2.73e-09!70;CL:0000220!2.73e-09!70;CL:0000221!2.75e-07!44;CL:0000133!2.75e-07!44;CL:0002319!3.07e-07!43 | |ontology_enrichment_celltype=CL:0000393!2.21e-14!39;CL:0000211!2.21e-14!39;CL:0000540!2.98e-12!33;CL:0000047!2.98e-12!33;CL:0000031!2.98e-12!33;CL:0000404!2.98e-12!33;CL:0000117!1.60e-11!23;CL:0000337!1.60e-11!23;CL:0000055!2.13e-09!50;CL:0002321!2.73e-09!70;CL:0000220!2.73e-09!70;CL:0000221!2.75e-07!44;CL:0000133!2.75e-07!44;CL:0002319!3.07e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.21e-14,39;CL:0000211,2.21e-14,39;CL:0000540,2.98e-12,33;CL:0000047,2.98e-12,33;CL:0000031,2.98e-12,33;CL:0000404,2.98e-12,33;CL:0000117,1.60e-11,23;CL:0000337,1.60e-11,23;CL:0002321,2.73e-09,70;CL:0000221,2.75e-07,44;CL:0000133,2.75e-07,44;CL:0002319,3.07e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.50e-20!102;UBERON:0000924!2.50e-20!102;UBERON:0006601!2.50e-20!102;UBERON:0000073!4.50e-18!75;UBERON:0001016!4.50e-18!75;UBERON:0002346!5.54e-18!71;UBERON:0003075!5.54e-18!71;UBERON:0007284!5.54e-18!71;UBERON:0001017!3.67e-17!73;UBERON:0005743!3.67e-17!73;UBERON:0002020!2.00e-16!34;UBERON:0001049!1.05e-15!52;UBERON:0005068!1.05e-15!52;UBERON:0006241!1.05e-15!52;UBERON:0007135!1.05e-15!52;UBERON:0000955!5.48e-15!50;UBERON:0006238!5.48e-15!50;UBERON:0002616!1.56e-14!49;UBERON:0002791!5.60e-14!29;UBERON:0003528!5.60e-14!29;UBERON:0001893!5.60e-14!29;UBERON:0000033!4.70e-13!63;UBERON:0003080!8.96e-13!40;UBERON:0002780!3.12e-12!39;UBERON:0001890!3.12e-12!39;UBERON:0006240!3.12e-12!39;UBERON:0003056!3.89e-11!49;UBERON:0000956!6.94e-10!21;UBERON:0001869!6.94e-10!21;UBERON:0000203!6.94e-10!21;UBERON:0002619!1.87e-08!17;UBERON:0002021!3.76e-08!10;UBERON:0000411!3.76e-08!10;UBERON:0001950!3.76e-08!10;UBERON:0007811!5.23e-07!86 | |ontology_enrichment_uberon=UBERON:0004121!2.50e-20!102;UBERON:0000924!2.50e-20!102;UBERON:0006601!2.50e-20!102;UBERON:0000073!4.50e-18!75;UBERON:0001016!4.50e-18!75;UBERON:0002346!5.54e-18!71;UBERON:0003075!5.54e-18!71;UBERON:0007284!5.54e-18!71;UBERON:0001017!3.67e-17!73;UBERON:0005743!3.67e-17!73;UBERON:0002020!2.00e-16!34;UBERON:0001049!1.05e-15!52;UBERON:0005068!1.05e-15!52;UBERON:0006241!1.05e-15!52;UBERON:0007135!1.05e-15!52;UBERON:0000955!5.48e-15!50;UBERON:0006238!5.48e-15!50;UBERON:0002616!1.56e-14!49;UBERON:0002791!5.60e-14!29;UBERON:0003528!5.60e-14!29;UBERON:0001893!5.60e-14!29;UBERON:0000033!4.70e-13!63;UBERON:0003080!8.96e-13!40;UBERON:0002780!3.12e-12!39;UBERON:0001890!3.12e-12!39;UBERON:0006240!3.12e-12!39;UBERON:0003056!3.89e-11!49;UBERON:0000956!6.94e-10!21;UBERON:0001869!6.94e-10!21;UBERON:0000203!6.94e-10!21;UBERON:0002619!1.87e-08!17;UBERON:0002021!3.76e-08!10;UBERON:0000411!3.76e-08!10;UBERON:0001950!3.76e-08!10;UBERON:0007811!5.23e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.50e-18,75;UBERON:0001017,3.67e-17,73;UBERON:0004121,5.17e-17,95;UBERON:0000924,5.17e-17,95;UBERON:0006601,5.17e-17,95;UBERON:0000073,5.48e-17,54;UBERON:0002020,2.00e-16,34;UBERON:0001049,1.05e-15,52;UBERON:0005068,1.05e-15,52;UBERON:0006241,1.05e-15,52;UBERON:0007135,1.05e-15,52;UBERON:0002346,8.74e-15,64;UBERON:0003075,8.74e-15,64;UBERON:0007284,8.74e-15,64;UBERON:0010371,3.09e-14,73;UBERON:0003528,5.60e-14,29;UBERON:0002791,5.60e-14,29;UBERON:0001893,5.60e-14,29;UBERON:0000955,3.38e-13,47;UBERON:0006238,3.38e-13,47;UBERON:0003080,8.96e-13,40;UBERON:0002616,9.31e-13,46;UBERON:0002780,3.12e-12,39;UBERON:0001890,3.12e-12,39;UBERON:0006240,3.12e-12,39;UBERON:0003056,3.89e-11,49;UBERON:0000956,6.94e-10,21;UBERON:0001869,6.94e-10,21;UBERON:0000203,6.94e-10,21;UBERON:0010314,1.47e-09,92;UBERON:0002619,1.87e-08,17;UBERON:0002021,3.76e-08,10;UBERON:0000411,3.76e-08,10;UBERON:0001950,3.76e-08,10 | |||
|phase1_expression=47.8845052843334,68.3991798973148,70.9798813447676,58.0731285709114,53.0949473743128,47.8455924948886,53.9645199775664,39.2534903262392,56.3154888606667,64.6018092648702,49.1395568807199,45.7094471043278,50.8466167895681,52.4522414513984,33.6440859433819,29.9663395736942,21.6864182219725,52.0512572841092,50.3209971333061,52.1999271711577,62.7619481314895,46.8653289668179,63.9939483390392,57.5972722056264,65.8404636662778,72.9274594426076,69.7834433777701,67.2270245979974,67.4583139070127,69.8123459435008,80.4881753678756,31.7515336729816,33.2134985295668,15.8481681015439,31.7736781726402,37.9014991417363,34.300451852078,89.5657689776983,75.0081930742848,78.5285615960697,98.8228899892104,76.5010943153459,72.3410426016419,121.238635710481,110.906362754149,91.9569228330025,34.4252191513137,25.2909181401318,35.1497892375155,66.6894553824792,36.9564153090957,27.3129872293446,58.7239121202077,64.5572306390096,60.832977644786,73.5761987062808,84.5273647819332,84.0545510412231,105.60919256871,109.501132709311,112.8219898241,23.041428180701,40.9075606211124,31.496490104849,49.4433181283487,31.2611250576284,21.2716078468067,21.1320067926855,86.9955847268128,85.3237530256285,86.8642090381208,108.261723089042,106.900373820581,101.299890950767,68.0502844229478,99.2756289538823,186.095838888967,157.055425844781,165.741449383487,113.685980023427,103.381037270723,104.182674111352,181.189766351896,159.261818638965,156.007010980123,124.333263069888,113.327857916086,121.159639786445,127.144278606416,89.4767271664341,85.2201596782933,84.3215399441759,132.594410073011,63.1452734216246,90.318922025226,91.3974849678565,54.351990590988,41.414568386468,53.515916948191,42.0474093667305,59.4359231457592,60.3134443847294,76.4415719119937,49.7746692207332,60.8339825241512,56.7526098664221,53.585591171567,62.3443983266067,62.1450920753212,124.691396814453,59.6789524075507,108.389710279122,122.687444540223,156.29937825307,128.289279485054,127.425923608291,69.9561758688278,60.2979318356032,33.6152009740952,45.6182516851694,39.7514733228708,38.3051449976825,54.0536107532554,95.4465398257644,88.8054036889049,48.792297544841,46.3684531837911,55.1910512513935,48.2866862877646,147.393989174346,156.922706766789,94.1151097325354,157.31100977401,183.603698363177,142.750386612418,147.477308128592,33.0977932513528,47.0258348906152,72.7841544288983,78.7052541015413,37.344567130296,47.3598335132954,43.0348490234785,47.622722436086,54.9054548151216,58.035515289037,55.8462278375984,72.9543505484024,32.9819029187249,25.7184269028234,29.5597888595434,30.4682068074329,36.4241896485533,44.5762773148373,55.5611768301447,31.2483798905034,50.5593494865529,48.8961023517959,46.3186504014816,33.1401236056803,36.1170132370888,34.3918537390538,30.7768156260773,33.4499193970587,37.7954426574077,38.3681008838173,33.2659017735528,45.0714221537274,33.2410896825231,37.1018468818755,32.9139366756174,37.5733967683104,36.4453191383144,34.3568432026552,135.00614697817,94.2606249394245,55.8407743242619,46.2788491661203,30.9267963276089,35.7644474665075,40.2066479324931,54.0511845990558,68.9371935919098,90.5473980295782,52.1981967698963,101.948652974163,93.4966976737003,80.9752841207484,89.8784441619144,47.6374286586737,48.4149231719315,48.9887532205743,24.8464950248537,35.6455359342354,37.1935527721165,44.8032921259691,54.5006488941028,56.1086559122548,76.6426829945998,85.9091061241285,101.107180729845,110.070270218246,70.5557252467414,30.3658092403291,25.7492283598296,26.5337292614127,26.9803961446709,31.5942079275666,37.6846260636501,29.6327021574335,36.1561555708329,43.929826110093,60.3826467414889,50.6111688829165,59.9112332379956,73.7530323605566,65.1212611084541,68.0245365122348,62.0770718959792,38.6562480011789,27.2151510658183,27.8381940671309,29.8056615326398,36.6838703797576,41.6576371550524,44.6856053594359,43.0343943409901,45.4002613779989,47.1986115226162,53.4194405973306,48.006424958719,53.5201516751593,66.3481649332798,77.7785127860755,68.355233949646,70.0879335614021,167.454265357267,160.931645691095,53.2788572474195,33.831104245386,68.1497753939114,79.2590650922176,70.0126042631596,65.2384818410467,77.5339385806732,62.8429898351208,70.8418727931065,71.0181734724488,81.8245700349304,107.963962317727,55.0727530608082,31.8737430564387,38.7670963261511,43.7170825877219,31.8588332015911,45.8855402332915,38.6974152914881,49.4145308960453,36.9127366100966,41.5037449724302,62.7980752398777,40.3522439720031,42.7796854061666,46.457403416565,51.6551182017494,50.5364161916116,89.5356163132462,40.8738683451074,33.1158230483852,43.9390921814764,53.2020700926821,52.7971700102129,64.8323141172357,51.7590413494819,83.0737846545535,66.5152702512395,80.4928652900611,50.7849659059759,53.6061896630406,46.44095219468,52.6432037053832,54.3306378156153,52.4665505933731,150.936195836555,35.0285305635598,34.4666069498582,40.0020179118577,25.0530047816239,33.4900857916512,31.8001660757066,43.6844565084208,50.3825228365169,45.7441913292643,42.9601778106801,27.046727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| ||
|short_description=p1@Atp6v1h | |short_description=p1@Atp6v1h | ||
}} | }} |
Latest revision as of 04:46, 27 September 2015
Short description: | p1@Atp6v1h |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Atp6v1h_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -12bp_to_ENSMUST00000044369, NM_133826, uc007afm.1, uc007afn.1_5end |
EntrezGene: | Atp6v1h |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.21e-14 | 39 |
electrically active cell | 2.21e-14 | 39 |
neuron | 2.98e-12 | 33 |
neuronal stem cell | 2.98e-12 | 33 |
neuroblast | 2.98e-12 | 33 |
electrically signaling cell | 2.98e-12 | 33 |
CNS neuron (sensu Vertebrata) | 1.60e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.60e-11 | 23 |
embryonic cell | 2.73e-09 | 70 |
ectodermal cell | 2.75e-07 | 44 |
neurectodermal cell | 2.75e-07 | 44 |
neural cell | 3.07e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.50e-18 | 75 |
central nervous system | 3.67e-17 | 73 |
ectoderm-derived structure | 5.17e-17 | 95 |
ectoderm | 5.17e-17 | 95 |
presumptive ectoderm | 5.17e-17 | 95 |
regional part of nervous system | 5.48e-17 | 54 |
gray matter | 2.00e-16 | 34 |
neural tube | 1.05e-15 | 52 |
neural rod | 1.05e-15 | 52 |
future spinal cord | 1.05e-15 | 52 |
neural keel | 1.05e-15 | 52 |
neurectoderm | 8.74e-15 | 64 |
neural plate | 8.74e-15 | 64 |
presumptive neural plate | 8.74e-15 | 64 |
ecto-epithelium | 3.09e-14 | 73 |
brain grey matter | 5.60e-14 | 29 |
regional part of telencephalon | 5.60e-14 | 29 |
telencephalon | 5.60e-14 | 29 |
brain | 3.38e-13 | 47 |
future brain | 3.38e-13 | 47 |
anterior neural tube | 8.96e-13 | 40 |
regional part of brain | 9.31e-13 | 46 |
regional part of forebrain | 3.12e-12 | 39 |
forebrain | 3.12e-12 | 39 |
future forebrain | 3.12e-12 | 39 |
pre-chordal neural plate | 3.89e-11 | 49 |
cerebral cortex | 6.94e-10 | 21 |
cerebral hemisphere | 6.94e-10 | 21 |
pallium | 6.94e-10 | 21 |
structure with developmental contribution from neural crest | 1.47e-09 | 92 |
regional part of cerebral cortex | 1.87e-08 | 17 |
occipital lobe | 3.76e-08 | 10 |
visual cortex | 3.76e-08 | 10 |
neocortex | 3.76e-08 | 10 |