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FFCP PHASE1:Mm9::chr18:37560499..37560540,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr18:37560499..37560540,+
|DHSsupport=NA
|short_description=p1@Pcdhb9
|DPIdataset=NA
|description=CAGE_peak_1_at_Pcdhb9_5end
|association_with_transcript=0bp_to_ENSMUST00000057228,NM_053134,uc008epu.1_5end
|EntrezGene=93880
|EntrezGene=93880
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E9Q5G2,Q8CCK1,Q91XZ1
|UniProt=E9Q5G2,Q8CCK1,Q91XZ1
|association_with_transcript=0bp_to_ENSMUST00000057228,NM_053134,uc008epu.1_5end
|cluster_id=chr18:37560499..37560540,+
|description=CAGE_peak_1_at_Pcdhb9_5end
|id=chr18:37560499..37560540,+
|ontology_enrichment_celltype=CL:0000540!9.14e-10!33;CL:0000047!9.14e-10!33;CL:0000031!9.14e-10!33;CL:0000404!9.14e-10!33;CL:0000393!3.82e-09!39;CL:0000211!3.82e-09!39;CL:0000117!9.32e-07!23;CL:0000337!9.32e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.68e-10,33;CL:0000047,1.68e-10,33;CL:0000031,1.68e-10,33;CL:0000404,1.68e-10,33;CL:0000393,3.54e-09,39;CL:0000211,3.54e-09,39;CL:0000117,3.17e-07,23;CL:0000337,3.17e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.36e-19!73;UBERON:0005743!1.36e-19!73;UBERON:0000073!8.27e-19!75;UBERON:0001016!8.27e-19!75;UBERON:0002346!7.96e-18!71;UBERON:0003075!7.96e-18!71;UBERON:0007284!7.96e-18!71;UBERON:0004121!1.70e-17!102;UBERON:0000924!1.70e-17!102;UBERON:0006601!1.70e-17!102;UBERON:0000033!2.08e-17!63;UBERON:0001049!6.13e-16!52;UBERON:0005068!6.13e-16!52;UBERON:0006241!6.13e-16!52;UBERON:0007135!6.13e-16!52;UBERON:0000955!1.65e-15!50;UBERON:0006238!1.65e-15!50;UBERON:0003056!1.90e-15!49;UBERON:0002616!7.54e-15!49;UBERON:0003080!2.24e-13!40;UBERON:0002780!9.08e-13!39;UBERON:0001890!9.08e-13!39;UBERON:0006240!9.08e-13!39;UBERON:0002020!2.71e-11!34;UBERON:0002791!7.30e-10!29;UBERON:0003528!7.30e-10!29;UBERON:0001893!7.30e-10!29;UBERON:0000153!2.57e-08!94;UBERON:0007811!7.16e-08!86;UBERON:0002021!2.19e-07!10;UBERON:0000411!2.19e-07!10;UBERON:0001950!2.19e-07!10;UBERON:0000956!9.37e-07!21;UBERON:0001869!9.37e-07!21;UBERON:0000203!9.37e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.51e-22,73;UBERON:0002346,2.58e-21,64;UBERON:0003075,2.58e-21,64;UBERON:0007284,2.58e-21,64;UBERON:0001016,9.86e-21,75;UBERON:0004121,7.71e-19,95;UBERON:0000924,7.71e-19,95;UBERON:0006601,7.71e-19,95;UBERON:0000073,1.42e-18,54;UBERON:0010371,1.59e-18,73;UBERON:0001049,4.85e-18,52;UBERON:0005068,4.85e-18,52;UBERON:0006241,4.85e-18,52;UBERON:0007135,4.85e-18,52;UBERON:0003056,4.25e-17,49;UBERON:0000955,2.07e-16,47;UBERON:0006238,2.07e-16,47;UBERON:0002616,1.09e-15,46;UBERON:0003080,7.58e-15,40;UBERON:0002780,3.54e-14,39;UBERON:0001890,3.54e-14,39;UBERON:0006240,3.54e-14,39;UBERON:0002020,1.44e-12,34;UBERON:0010314,5.16e-12,92;UBERON:0003528,5.23e-11,29;UBERON:0002791,5.23e-11,29;UBERON:0001893,5.23e-11,29;UBERON:0002021,6.54e-08,10;UBERON:0000411,6.54e-08,10;UBERON:0001950,6.54e-08,10;UBERON:0000956,1.35e-07,21;UBERON:0001869,1.35e-07,21;UBERON:0000203,1.35e-07,21;UBERON:0002619,1.76e-07,17
|phase1_expression=6.24580503708696,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15459499319405,2.02753862439029,2.75320128242522,0,0,0,0,0,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,5.46254444320914,5.28990979272033,3.80298842103708,0.338844532069132,0,0,0,0,0.898800331555214,0,1.34796496001021,1.08004750665353,1.89292465216244,2.57085885963423,3.97563373712904,2.57230678351403,2.30029130443767,2.75765635983006,2.20231761998777,6.12899222808901,7.68032666281217,3.42904348098504,5.03182039813253,4.68822033501084,4.4669279840221,5.06486349028512,5.95913166329559,3.24091444021034,4.9830088279686,3.72798891650601,0.227178579999552,0.982430281388212,1.15945795480671,0.860423876981386,0,0,0,0,2.38755514223978,11.5892619353079,7.27400812888033,5.3000936176551,6.05626705039726,2.56652954828636,2.54805239706646,0,0,0,0,1.48439043634778,3.36619248741323,2.07818994690755,0.520455980298408,1.21786191324856,1.38369298353635,1.3565037649736,1.52865319276416,0.753999547978053,0,1.59059292611903,0.884610551949874,1.45590164952668,1.32504911076236,0.484875253135222,1.86391761218122,6.73395833126558,15.0801628905688,0.766371165625774,0,0,0,13.9305294646485,14.1825186873774,8.79580464790051,18.5992022605736,11.5071955798649,12.8828587626927,9.89671704713322,5.19380755636613,2.48813941220186,0.758168275301024,2.10441855886474,1.04096354370163,2.5289231487682,1.80062129805349,3.61691562805716,5.3748834329549,5.63700369253339,4.96619140166563,11.1242449417777,0,0.945530400839096,2.46331573829528,1.53437012699302,3.33656699070717,2.089512999133,2.26360350048738,1.39323986772945,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0.590292695242212,0.462801338662135,1.39520366850245,0.804820204198858,0.583826711835847,0.493679549740441,1.80584210487005,1.21603214318784,0.877199924551994,0.878200461164203,1.20785776884335,23.7627641877464,10.8049842998249,0,0.264450566663544,1.06644125267617,1.85789337488351,0.644337306610467,1.61346819698674,0.667134131534611,1.33157938278791,0.949058123089023,0.988193728344065,1.25667604400135,1.98956472041151,1.75467678407208,0,1.08069024937347,1.39398891278057,0.758671603812327,1.02823661348756,2.25415471346161,1.22190796707189,0.969762435838129,2.38461787627083,3.79419222745544,0.885660887877613,1.41298855057237,1.1105744752962,0.592905254174298,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,5.72734889516475,0.568474235311454,0.814824882210129,2.03694102930226,1.17345124144251,1.84256883185997,1.90434912708811,2.34160377429359,6.46304090835383,6.64394068946325,6.69710028361446,10.651115456523,9.15230403889247,8.38964539772767,0,0,0.491764273019036,1.65562047782839,16.215609588767,8.20481806145422,20.3279332267078,0.504941854408746,1.26203287766503,3.51394869866975,10.7711698866399,2.38968797952552,9.80314165962534,5.94460714656548,2.83367491172426,4.67609372658099,5.92931666919785,18.6366363524648,14.0520684356186,6.41036173202119,4.23506094319298,18.3116836499514,0,0.242780636154981,0.604647113929502,0.754420319023592,0.590603785761546,0.922305443831782,1.55056975900933,0.727067458955011,1.42598951353889,0.316036757935816,0,0,7.48967132658334,1.26042765821917,1.55230420539305,2.57204442037911,2.83744373827638,5.17269571046005,4.27827453565514,6.69822888052118,1.40803024838226,0,0.220528398054962,0.32977250588296,1.13025098687134,0.603129249281559,0.358117032009409,0.656563598980245,1.45740418314925,11.4963687246516,0.341741761595705,1.44470807574256,1.29636169158798,0.376736914009382,0.546776910884101,0,0,0,0,0,0.949007980743406,1.01659733563424,1.83609079397062,1.25452977608681,2.40198820120795,1.34864346384821,1.65306911450672,0.26175594198403,1.68499465279331,0,0,1.94371509857172,1.98550188548517,2.33341426012857,2.71235629303235,3.04121025883401,3.28600268208111,2.3436789271911,1.36317147753424,0.241584120826006,0.288030006257865,0.632022241256357,0.202725215290164,0.821687657318618,0.389762468933385,0.358053391334963,0.596044064343795,0,0.147689527174577,0,0.15241361331,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,1.9318959403219,10.8855835761686,21.42874003927,10.2896821957952,0,12.9892923801925,13.8097570952153,12.6037012956667,9.96748457593388,22.6077231524312,17.3740596399631,10.8003600037089,13.9599572999508,9.9691329976525,7.7664046762773,0.31136204275253,2.79317411380722,2.39027048055788,1.21553358534147,2.30574478890781,1.2869045591501,2.22246727801615,1.23621034343337,1.92551525755089,1.01078884705519,2.5347929989024,2.07488975524684,2.52832070168682,3.20125762024346,2.64203157195821,0.952587382566147,2.20180219295225,1.73618298417335,1.23625770240992,1.47198920134397,1.71434626192708,1.59728225543404,3.57654284920981,1.16277133305863,2.54095327121393,2.876896668317,1.64635175585495,1.05227884575137,2.30866993537965,0.561142271657738,1.54225523561426,1.28055827088233,1.22769312950907,2.47898945897546,2.3148793317737,2.24829520144151,2.57324769289949,4.72716318906256,3.06061331310149,1.76473135295612,1.62307484934295
|phase1_expression=6.24580503708696,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15459499319405,2.02753862439029,2.75320128242522,0,0,0,0,0,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,5.46254444320914,5.28990979272033,3.80298842103708,0.338844532069132,0,0,0,0,0.898800331555214,0,1.34796496001021,1.08004750665353,1.89292465216244,2.57085885963423,3.97563373712904,2.57230678351403,2.30029130443767,2.75765635983006,2.20231761998777,6.12899222808901,7.68032666281217,3.42904348098504,5.03182039813253,4.68822033501084,4.4669279840221,5.06486349028512,5.95913166329559,3.24091444021034,4.9830088279686,3.72798891650601,0.227178579999552,0.982430281388212,1.15945795480671,0.860423876981386,0,0,0,0,2.38755514223978,11.5892619353079,7.27400812888033,5.3000936176551,6.05626705039726,2.56652954828636,2.54805239706646,0,0,0,0,1.48439043634778,3.36619248741323,2.07818994690755,0.520455980298408,1.21786191324856,1.38369298353635,1.3565037649736,1.52865319276416,0.753999547978053,0,1.59059292611903,0.884610551949874,1.45590164952668,1.32504911076236,0.484875253135222,1.86391761218122,6.73395833126558,15.0801628905688,0.766371165625774,0,0,0,13.9305294646485,14.1825186873774,8.79580464790051,18.5992022605736,11.5071955798649,12.8828587626927,9.89671704713322,5.19380755636613,2.48813941220186,0.758168275301024,2.10441855886474,1.04096354370163,2.5289231487682,1.80062129805349,3.61691562805716,5.3748834329549,5.63700369253339,4.96619140166563,11.1242449417777,0,0.945530400839096,2.46331573829528,1.53437012699302,3.33656699070717,2.089512999133,2.26360350048738,1.39323986772945,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0.590292695242212,0.462801338662135,1.39520366850245,0.804820204198858,0.583826711835847,0.493679549740441,1.80584210487005,1.21603214318784,0.877199924551994,0.878200461164203,1.20785776884335,23.7627641877464,10.8049842998249,0,0.264450566663544,1.06644125267617,1.85789337488351,0.644337306610467,1.61346819698674,0.667134131534611,1.33157938278791,0.949058123089023,0.988193728344065,1.25667604400135,1.98956472041151,1.75467678407208,0,1.08069024937347,1.39398891278057,0.758671603812327,1.02823661348756,2.25415471346161,1.22190796707189,0.969762435838129,2.38461787627083,3.79419222745544,0.885660887877613,1.41298855057237,1.1105744752962,0.592905254174298,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,5.72734889516475,0.568474235311454,0.814824882210129,2.03694102930226,1.17345124144251,1.84256883185997,1.90434912708811,2.34160377429359,6.46304090835383,6.64394068946325,6.69710028361446,10.651115456523,9.15230403889247,8.38964539772767,0,0,0.491764273019036,1.65562047782839,16.215609588767,8.20481806145422,20.3279332267078,0.504941854408746,1.26203287766503,3.51394869866975,10.7711698866399,2.38968797952552,9.80314165962534,5.94460714656548,2.83367491172426,4.67609372658099,5.92931666919785,18.6366363524648,14.0520684356186,6.41036173202119,4.23506094319298,18.3116836499514,0,0.242780636154981,0.604647113929502,0.754420319023592,0.590603785761546,0.922305443831782,1.55056975900933,0.727067458955011,1.42598951353889,0.316036757935816,0,0,7.48967132658334,1.26042765821917,1.55230420539305,2.57204442037911,2.83744373827638,5.17269571046005,4.27827453565514,6.69822888052118,1.40803024838226,0,0.220528398054962,0.32977250588296,1.13025098687134,0.603129249281559,0.358117032009409,0.656563598980245,1.45740418314925,11.4963687246516,0.341741761595705,1.44470807574256,1.29636169158798,0.376736914009382,0.546776910884101,0,0,0,0,0,0.949007980743406,1.01659733563424,1.83609079397062,1.25452977608681,2.40198820120795,1.34864346384821,1.65306911450672,0.26175594198403,1.68499465279331,0,0,1.94371509857172,1.98550188548517,2.33341426012857,2.71235629303235,3.04121025883401,3.28600268208111,2.3436789271911,1.36317147753424,0.241584120826006,0.288030006257865,0.632022241256357,0.202725215290164,0.821687657318618,0.389762468933385,0.358053391334963,0.596044064343795,0,0.147689527174577,0,0.15241361331,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,1.9318959403219,10.8855835761686,21.42874003927,10.2896821957952,0,12.9892923801925,13.8097570952153,12.6037012956667,9.96748457593388,22.6077231524312,17.3740596399631,10.8003600037089,13.9599572999508,9.9691329976525,7.7664046762773,0.31136204275253,2.79317411380722,2.39027048055788,1.21553358534147,2.30574478890781,1.2869045591501,2.22246727801615,1.23621034343337,1.92551525755089,1.01078884705519,2.5347929989024,2.07488975524684,2.52832070168682,3.20125762024346,2.64203157195821,0.952587382566147,2.20180219295225,1.73618298417335,1.23625770240992,1.47198920134397,1.71434626192708,1.59728225543404,3.57654284920981,1.16277133305863,2.54095327121393,2.876896668317,1.64635175585495,1.05227884575137,2.30866993537965,0.561142271657738,1.54225523561426,1.28055827088233,1.22769312950907,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|short_description=p1@Pcdhb9
}}
}}

Latest revision as of 05:45, 27 September 2015

Short description:p1@Pcdhb9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pcdhb9_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000057228, NM_053134, uc008epu.1_5end
EntrezGene:Pcdhb9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pcdhb9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I215.08
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.93
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F18.80
cortex, adult.CNhs10473.12-14D518.60
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F212.88
diencephalon, neonate N30.CNhs11201.1388-42B29.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.19
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C65.37
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G84.97
eyeball, neonate N16.CNhs11188.777-19A211.12
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E823.76
hippocampus, neonate N00.CNhs11228.627-43G110.80
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G72.38
kidney, neonate N10.CNhs11206.758-6D53.79
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E56.46
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E66.70
lung, neonate N20.CNhs11109.822-18A410.65
lung, neonate N25.CNhs11119.1359-25C79.15
lung, neonate N30.CNhs11133.1394-42H28.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C216.22
medulla oblongata, neonate N30.CNhs11200.1396-42A38.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C720.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.77
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I918.64
ovary, adult.CNhs10507.91-2I714.05
ovary, embryo E18.CNhs11040.505-44H76.41
ovary, neonate N00.CNhs11217.1299-22I44.24
oviduct, adult pregnant day01.CNhs10500.988-6G618.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C911.50
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F510.89
uterus, adult.CNhs10509.92-27E521.43
vagina, adult.CNhs10502.89-27D510.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.68e-1033
neuronal stem cell1.68e-1033
neuroblast1.68e-1033
electrically signaling cell1.68e-1033
electrically responsive cell3.54e-0939
electrically active cell3.54e-0939
CNS neuron (sensu Vertebrata)3.17e-0723
neuroblast (sensu Vertebrata)3.17e-0723

Uber anatomy
Ontology termp-valuen
central nervous system3.51e-2273
neurectoderm2.58e-2164
neural plate2.58e-2164
presumptive neural plate2.58e-2164
nervous system9.86e-2175
ectoderm-derived structure7.71e-1995
ectoderm7.71e-1995
presumptive ectoderm7.71e-1995
regional part of nervous system1.42e-1854
ecto-epithelium1.59e-1873
neural tube4.85e-1852
neural rod4.85e-1852
future spinal cord4.85e-1852
neural keel4.85e-1852
pre-chordal neural plate4.25e-1749
brain2.07e-1647
future brain2.07e-1647
regional part of brain1.09e-1546
anterior neural tube7.58e-1540
regional part of forebrain3.54e-1439
forebrain3.54e-1439
future forebrain3.54e-1439
gray matter1.44e-1234
structure with developmental contribution from neural crest5.16e-1292
brain grey matter5.23e-1129
regional part of telencephalon5.23e-1129
telencephalon5.23e-1129
occipital lobe6.54e-0810
visual cortex6.54e-0810
neocortex6.54e-0810
cerebral cortex1.35e-0721
cerebral hemisphere1.35e-0721
pallium1.35e-0721
regional part of cerebral cortex1.76e-0717
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