FFCP PHASE1:Mm9::chr7:97591284..97591375,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:97591284..97591375,+
|short_description=p1@Crebzf
|description=CAGE_peak_1_at_Crebzf_5end
|association_with_transcript=0bp_to_ENSMUST00000107206,NM_145151,...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=233490 | |EntrezGene=233490 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=540 | |||
|TSSclassifier=NA | |||
|UniProt=Q91ZR3 | |UniProt=Q91ZR3 | ||
|association_with_transcript=0bp_to_ENSMUST00000107206,NM_145151,uc009ihl.1_5end | |||
|cluster_id=chr7:97591284..97591375,+ | |||
|description=CAGE_peak_1_at_Crebzf_5end | |||
|id=chr7:97591284..97591375,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.22e-09!13;CL:0000051!4.22e-09!13;CL:0000838!5.56e-09!12;CL:0000084!2.44e-08!11;CL:0000827!2.44e-08!11;CL:0000791!1.47e-07!9;CL:0000789!1.47e-07!9;CL:0002420!1.47e-07!9;CL:0002419!1.47e-07!9;CL:0000790!1.47e-07!9;CL:0000624!6.58e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.22e-09,13;CL:0000051,4.22e-09,13;CL:0000838,5.56e-09,12;CL:0000084,2.44e-08,11;CL:0000827,2.44e-08,11;CL:0000791,1.47e-07,9;CL:0000789,1.47e-07,9;CL:0002420,1.47e-07,9;CL:0002419,1.47e-07,9;CL:0000790,1.47e-07,9;CL:0000624,6.58e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!4.06e-17!94;UBERON:0007811!6.35e-17!86;UBERON:0000033!1.28e-09!63;UBERON:0003056!1.75e-08!49;UBERON:0003408!6.71e-08!24;UBERON:0002370!7.41e-08!23;UBERON:0000974!7.41e-08!23;UBERON:0004807!7.41e-08!23;UBERON:0005058!7.41e-08!23;UBERON:0003351!7.41e-08!23;UBERON:0009113!7.41e-08!23;UBERON:0003295!7.41e-08!23;UBERON:0009722!7.41e-08!23;UBERON:0005562!7.41e-08!23;UBERON:0007690!7.41e-08!23;UBERON:0006562!2.66e-07!24;UBERON:0001557!2.66e-07!24;UBERON:0001042!2.66e-07!24;UBERON:0008814!2.66e-07!24;UBERON:0009145!2.66e-07!24;UBERON:0001017!7.26e-07!73;UBERON:0005743!7.26e-07!73;UBERON:0002346!9.62e-07!71;UBERON:0003075!9.62e-07!71;UBERON:0007284!9.62e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.12e-11,43;UBERON:0007811,4.44e-11,36;UBERON:0010371,9.72e-09,73;UBERON:0003056,1.75e-08,49;UBERON:0002346,3.00e-08,64;UBERON:0003075,3.00e-08,64;UBERON:0007284,3.00e-08,64;UBERON:0003408,6.71e-08,24;UBERON:0002370,7.41e-08,23;UBERON:0000974,7.41e-08,23;UBERON:0004807,7.41e-08,23;UBERON:0005058,7.41e-08,23;UBERON:0003351,7.41e-08,23;UBERON:0009113,7.41e-08,23;UBERON:0003295,7.41e-08,23;UBERON:0009722,7.41e-08,23;UBERON:0005562,7.41e-08,23;UBERON:0007690,7.41e-08,23;UBERON:0004121,8.16e-08,95;UBERON:0000924,8.16e-08,95;UBERON:0006601,8.16e-08,95;UBERON:0006562,2.66e-07,24;UBERON:0001557,2.66e-07,24;UBERON:0001042,2.66e-07,24;UBERON:0008814,2.66e-07,24;UBERON:0009145,2.66e-07,24;UBERON:0001017,7.26e-07,73 | |||
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| ||
|short_description=p1@Crebzf | |||
}} | }} |
Latest revision as of 05:53, 27 September 2015
Short description: | p1@Crebzf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Crebzf_5end |
Coexpression cluster: | MCL_coexpression_mm9:540 |
Association with transcript: | 0bp_to_ENSMUST00000107206, NM_145151, uc009ihl.1_5end |
EntrezGene: | Crebzf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.22e-09 | 13 |
common lymphoid progenitor | 4.22e-09 | 13 |
lymphoid lineage restricted progenitor cell | 5.56e-09 | 12 |
T cell | 2.44e-08 | 11 |
pro-T cell | 2.44e-08 | 11 |
mature alpha-beta T cell | 1.47e-07 | 9 |
alpha-beta T cell | 1.47e-07 | 9 |
immature T cell | 1.47e-07 | 9 |
mature T cell | 1.47e-07 | 9 |
immature alpha-beta T cell | 1.47e-07 | 9 |
CD4-positive, alpha-beta T cell | 6.58e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 1.12e-11 | 43 |
craniocervical region | 4.44e-11 | 36 |
ecto-epithelium | 9.72e-09 | 73 |
pre-chordal neural plate | 1.75e-08 | 49 |
neurectoderm | 3.00e-08 | 64 |
neural plate | 3.00e-08 | 64 |
presumptive neural plate | 3.00e-08 | 64 |
gland of gut | 6.71e-08 | 24 |
thymus | 7.41e-08 | 23 |
neck | 7.41e-08 | 23 |
respiratory system epithelium | 7.41e-08 | 23 |
hemolymphoid system gland | 7.41e-08 | 23 |
pharyngeal epithelium | 7.41e-08 | 23 |
thymic region | 7.41e-08 | 23 |
pharyngeal gland | 7.41e-08 | 23 |
entire pharyngeal arch endoderm | 7.41e-08 | 23 |
thymus primordium | 7.41e-08 | 23 |
early pharyngeal endoderm | 7.41e-08 | 23 |
ectoderm-derived structure | 8.16e-08 | 95 |
ectoderm | 8.16e-08 | 95 |
presumptive ectoderm | 8.16e-08 | 95 |
pharynx | 2.66e-07 | 24 |
upper respiratory tract | 2.66e-07 | 24 |
chordate pharynx | 2.66e-07 | 24 |
pharyngeal arch system | 2.66e-07 | 24 |
pharyngeal region of foregut | 2.66e-07 | 24 |
central nervous system | 7.26e-07 | 73 |