FFCP PHASE1:Mm9::chr18:38114719..38114776,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:38114719..38114776,+
|short_description=p2@Rell2
|description=CAGE_peak_2_at_Rell2_5end
|association_with_transcript=-436bp_to_ENSMUST00000070709,NM_15379...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=225392 | |EntrezGene=225392 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BRJ3,Q8CFT0 | |UniProt=Q8BRJ3,Q8CFT0 | ||
|association_with_transcript=-436bp_to_ENSMUST00000070709,NM_153793,uc008erm.2,uc008ern.2_5end | |||
|cluster_id=chr18:38114719..38114776,+ | |||
|description=CAGE_peak_2_at_Rell2_5end | |||
|id=chr18:38114719..38114776,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.32e-13!23;CL:0000337!1.32e-13!23;CL:0000540!9.76e-12!33;CL:0000047!9.76e-12!33;CL:0000031!9.76e-12!33;CL:0000404!9.76e-12!33;CL:0000221!6.26e-09!44;CL:0000133!6.26e-09!44;CL:0002319!1.29e-08!43;CL:0000393!2.36e-08!39;CL:0000211!2.36e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.28e-19,23;CL:0000337,3.28e-19,23;CL:0000540,5.52e-12,33;CL:0000047,5.52e-12,33;CL:0000031,5.52e-12,33;CL:0000404,5.52e-12,33;CL:0000393,6.68e-09,39;CL:0000211,6.68e-09,39;CL:0000221,8.85e-08,44;CL:0000133,8.85e-08,44;CL:0002319,2.26e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.32e-23!73;UBERON:0005743!1.32e-23!73;UBERON:0000073!1.44e-23!75;UBERON:0001016!1.44e-23!75;UBERON:0002346!6.62e-22!71;UBERON:0003075!6.62e-22!71;UBERON:0007284!6.62e-22!71;UBERON:0001049!7.90e-22!52;UBERON:0005068!7.90e-22!52;UBERON:0006241!7.90e-22!52;UBERON:0007135!7.90e-22!52;UBERON:0000033!7.33e-21!63;UBERON:0000955!3.00e-20!50;UBERON:0006238!3.00e-20!50;UBERON:0004121!3.54e-20!102;UBERON:0000924!3.54e-20!102;UBERON:0006601!3.54e-20!102;UBERON:0002616!1.06e-19!49;UBERON:0003056!6.19e-18!49;UBERON:0002020!5.50e-17!34;UBERON:0003080!1.08e-16!40;UBERON:0007811!1.59e-16!86;UBERON:0002780!5.41e-16!39;UBERON:0001890!5.41e-16!39;UBERON:0006240!5.41e-16!39;UBERON:0000153!2.02e-14!94;UBERON:0002791!9.52e-14!29;UBERON:0003528!9.52e-14!29;UBERON:0001893!9.52e-14!29;UBERON:0000956!2.64e-09!21;UBERON:0001869!2.64e-09!21;UBERON:0000203!2.64e-09!21;UBERON:0002619!2.19e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.81e-32,54;UBERON:0002346,4.00e-31,64;UBERON:0003075,4.00e-31,64;UBERON:0007284,4.00e-31,64;UBERON:0001049,1.67e-30,52;UBERON:0005068,1.67e-30,52;UBERON:0006241,1.67e-30,52;UBERON:0007135,1.67e-30,52;UBERON:0001017,1.09e-27,73;UBERON:0001016,1.98e-26,75;UBERON:0010371,3.93e-26,73;UBERON:0000955,4.28e-25,47;UBERON:0006238,4.28e-25,47;UBERON:0002020,1.66e-24,34;UBERON:0002616,2.85e-24,46;UBERON:0004121,5.35e-24,95;UBERON:0000924,5.35e-24,95;UBERON:0006601,5.35e-24,95;UBERON:0003056,1.70e-23,49;UBERON:0003080,4.38e-22,40;UBERON:0002780,4.97e-21,39;UBERON:0001890,4.97e-21,39;UBERON:0006240,4.97e-21,39;UBERON:0003528,1.79e-19,29;UBERON:0002791,1.79e-19,29;UBERON:0001893,1.79e-19,29;UBERON:0010314,1.32e-17,92;UBERON:0000956,1.35e-12,21;UBERON:0001869,1.35e-12,21;UBERON:0000203,1.35e-12,21;UBERON:0002619,1.21e-09,17;UBERON:0002021,1.32e-09,10;UBERON:0000411,1.32e-09,10;UBERON:0001950,1.32e-09,10;UBERON:0003076,9.19e-09,12;UBERON:0003057,9.19e-09,12;UBERON:0002420,2.87e-08,8;UBERON:0007245,2.87e-08,8;UBERON:0010009,2.87e-08,8;UBERON:0010011,2.87e-08,8;UBERON:0000454,2.87e-08,8;UBERON:0002240,1.93e-07,6;UBERON:0005174,1.93e-07,6;UBERON:0001137,1.93e-07,6 | |||
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| ||
|short_description=p2@Rell2 | |||
}} | }} |
Latest revision as of 06:08, 27 September 2015
Short description: | p2@Rell2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rell2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -436bp_to_ENSMUST00000070709, NM_153793, uc008erm.2, uc008ern.2_5end |
EntrezGene: | Rell2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.28e-19 | 23 |
neuroblast (sensu Vertebrata) | 3.28e-19 | 23 |
neuron | 5.52e-12 | 33 |
neuronal stem cell | 5.52e-12 | 33 |
neuroblast | 5.52e-12 | 33 |
electrically signaling cell | 5.52e-12 | 33 |
electrically responsive cell | 6.68e-09 | 39 |
electrically active cell | 6.68e-09 | 39 |
ectodermal cell | 8.85e-08 | 44 |
neurectodermal cell | 8.85e-08 | 44 |
neural cell | 2.26e-07 | 43 |