FFCP PHASE1:Mm9::chr4:89354729..89354776,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=242523 | |EntrezGene=242523 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=70 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CFG4 | |UniProt=Q8CFG4 | ||
|association_with_transcript=-112bp_to_ENSMUST00000052478,NM_175647,uc008tol.1_5end | |association_with_transcript=-112bp_to_ENSMUST00000052478,NM_175647,uc008tol.1_5end | ||
|cluster_id=chr4:89354729..89354776,+ | |||
|description=CAGE_peak_1_at_Dmrta1_5end | |description=CAGE_peak_1_at_Dmrta1_5end | ||
|id=chr4:89354729..89354776,+ | |id=chr4:89354729..89354776,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!2.39e-10!24;UBERON:0005156!3.06e-10!26;UBERON:0000990!3.06e-10!26;UBERON:0000991!4.34e-10!18;UBERON:0005564!4.34e-10!18;UBERON:0004176!1.22e-09!17;UBERON:0009196!1.22e-09!17;UBERON:0009117!1.22e-09!17;UBERON:0002346!7.94e-09!71;UBERON:0003075!7.94e-09!71;UBERON:0007284!7.94e-09!71;UBERON:0000153!1.99e-08!94;UBERON:0003135!5.48e-08!15;UBERON:0000473!1.44e-07!14;UBERON:0003056!2.92e-07!49;UBERON:0003101!4.10e-07!16;UBERON:0000079!4.10e-07!16;UBERON:0007811!6.15e-07!86;UBERON:0000033!6.50e-07!63;UBERON:0004121!7.84e-07!102;UBERON:0000924!7.84e-07!102;UBERON:0006601!7.84e-07!102;UBERON:0000073!8.60e-07!75;UBERON:0001016!8.60e-07!75 | |ontology_enrichment_uberon=UBERON:0003133!2.39e-10!24;UBERON:0005156!3.06e-10!26;UBERON:0000990!3.06e-10!26;UBERON:0000991!4.34e-10!18;UBERON:0005564!4.34e-10!18;UBERON:0004176!1.22e-09!17;UBERON:0009196!1.22e-09!17;UBERON:0009117!1.22e-09!17;UBERON:0002346!7.94e-09!71;UBERON:0003075!7.94e-09!71;UBERON:0007284!7.94e-09!71;UBERON:0000153!1.99e-08!94;UBERON:0003135!5.48e-08!15;UBERON:0000473!1.44e-07!14;UBERON:0003056!2.92e-07!49;UBERON:0003101!4.10e-07!16;UBERON:0000079!4.10e-07!16;UBERON:0007811!6.15e-07!86;UBERON:0000033!6.50e-07!63;UBERON:0004121!7.84e-07!102;UBERON:0000924!7.84e-07!102;UBERON:0006601!7.84e-07!102;UBERON:0000073!8.60e-07!75;UBERON:0001016!8.60e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,5.21e-23,17;UBERON:0009196,5.21e-23,17;UBERON:0009117,5.21e-23,17;UBERON:0005156,5.50e-22,26;UBERON:0000990,5.50e-22,26;UBERON:0000991,1.47e-21,18;UBERON:0005564,1.47e-21,18;UBERON:0003133,5.11e-21,24;UBERON:0000473,7.61e-17,14;UBERON:0003135,1.40e-15,15;UBERON:0003101,1.80e-14,16;UBERON:0000079,1.80e-14,16;UBERON:0000474,1.02e-09,9;UBERON:0002323,5.97e-09,37;UBERON:0004458,5.97e-09,37;UBERON:0003886,1.22e-08,38;UBERON:0002553,2.41e-08,39;UBERON:0000992,4.69e-08,3;UBERON:0003100,8.21e-08,11;UBERON:0003134,8.90e-08,8;UBERON:0000011,1.01e-07,3 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,3.57181818634493,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0.699932108126813,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933206510776299,0.405017814995072,1.05162480675691,0.285650984403804,0.662605622854841,0.979926393719632,0.383381884072945,0,0,0,0,0.263772575460388,0.548925861614458,0.52091337055676,0,0.56276261003168,0.30559649555362,0.589257170947335,0.427115042397309,0,0.454357159999104,0.302286240427142,0,0,0,0,0.649776417447669,0.896053774194671,0.983110940922263,0,0,0,3.66192891419369,0,0,0,0.432982082022428,0,0,0.34255163915718,1.03575153458869,0,0.346970653532272,0,0,0,0.705532242814229,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.915001205637253,0.376963056338593,0.347648640384553,0.511430914660661,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0.758168275301024,0.841767423545896,2.21204753036596,0.229902104433473,1.26043490863744,0.60281927134286,0.544291993210623,0.640568601424249,0,0.517406741478031,1.29340795759705,1.32374256117473,0.879755620819744,0.43839146485515,0.556094498451196,0,0,0.796137067273973,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.946978942340841,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.295220295959204,0.156998727841375,0,2.96452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0.315508219416257,0.780877488593277,4.52389135238878,1.43381278771531,2.00518806674155,1.41538265394416,0,0.292255857911312,1.18586333383957,0,3.83238230062325,1.42452482933804,1.79175655288934,2.96946221350564,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.900305470156551,1.03486947026204,0.643011105094777,1.06404140185364,0.713475270408282,0.822745103010605,0.608929898229199,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0.512612642393558,0,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0.609958401380546,0.108005340821801,0.209088296014469,0.436725127492355,0.269728692769641,0.0826534557253359,0,0.259229946583586,0,17.4744810992099,1.34564891439581,1.48912641411388,1.36115831840833,0.774958940866387,2.19642963138012,3.28600268208111,17.5775919539333,43.9360653143728,26.5742532908607,17.8578603879877,0.316011120628178,0.810900861160657,0.821687657318618,0.909445760844565,0.716106782669926,0.39736270956253,0.961563596159751,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.292373642219257,0.288635524920988,0.233753804363138,0.226730383615211,0,0,0,0,0.375364950902364,2.56412273974171,16.0776284309299,0,0,0.920650473014354,1.71868654031819,0.343706364687375,0,0,1.35004500046361,0.45032120322422,0,0,1.45302286617847,0.798049746802062,1.87806966329548,0.486213434136588,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.532427418478012,0.476872379894642,0,0.282328141245992,0.25384382367503,0,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0.749431733813838,1.16965804222704,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,3.57181818634493,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0,0.699932108126813,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933206510776299,0.405017814995072,1.05162480675691,0.285650984403804,0.662605622854841,0.979926393719632,0.383381884072945,0,0,0,0,0.263772575460388,0.548925861614458,0.52091337055676,0,0.56276261003168,0.30559649555362,0.589257170947335,0.427115042397309,0,0.454357159999104,0.302286240427142,0,0,0,0,0.649776417447669,0.896053774194671,0.983110940922263,0,0,0,3.66192891419369,0,0,0,0.432982082022428,0,0,0.34255163915718,1.03575153458869,0,0.346970653532272,0,0,0,0.705532242814229,0.251333182659351,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.915001205637253,0.376963056338593,0.347648640384553,0.511430914660661,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0.758168275301024,0.841767423545896,2.21204753036596,0.229902104433473,1.26043490863744,0.60281927134286,0.544291993210623,0.640568601424249,0,0.517406741478031,1.29340795759705,1.32374256117473,0.879755620819744,0.43839146485515,0.556094498451196,0,0,0.796137067273973,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.946978942340841,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.295220295959204,0.156998727841375,0,2.96452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0.315508219416257,0.780877488593277,4.52389135238878,1.43381278771531,2.00518806674155,1.41538265394416,0,0.292255857911312,1.18586333383957,0,3.83238230062325,1.42452482933804,1.79175655288934,2.96946221350564,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.900305470156551,1.03486947026204,0.643011105094777,1.06404140185364,0.713475270408282,0.822745103010605,0.608929898229199,0,0,0,0.16488625294148,0,0,0,0,0,0.370850604021019,0.512612642393558,0,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0.609958401380546,0.108005340821801,0.209088296014469,0.436725127492355,0.269728692769641,0.0826534557253359,0,0.259229946583586,0,17.4744810992099,1.34564891439581,1.48912641411388,1.36115831840833,0.774958940866387,2.19642963138012,3.28600268208111,17.5775919539333,43.9360653143728,26.5742532908607,17.8578603879877,0.316011120628178,0.810900861160657,0.821687657318618,0.909445760844565,0.716106782669926,0.39736270956253,0.961563596159751,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.292373642219257,0.288635524920988,0.233753804363138,0.226730383615211,0,0,0,0,0.375364950902364,2.56412273974171,16.0776284309299,0,0,0.920650473014354,1.71868654031819,0.343706364687375,0,0,1.35004500046361,0.45032120322422,0,0,1.45302286617847,0.798049746802062,1.87806966329548,0.486213434136588,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.532427418478012,0.476872379894642,0,0.282328141245992,0.25384382367503,0,0,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0,0.192906610981141,0.749431733813838,1.16965804222704,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p1@Dmrta1 | |short_description=p1@Dmrta1 | ||
}} | }} |
Latest revision as of 07:03, 27 September 2015
Short description: | p1@Dmrta1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dmrta1_5end |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | -112bp_to_ENSMUST00000052478, NM_175647, uc008tol.1_5end |
EntrezGene: | Dmrta1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
external genitalia | 5.21e-23 | 17 |
indifferent external genitalia | 5.21e-23 | 17 |
indifferent gonad | 5.21e-23 | 17 |
reproductive structure | 5.50e-22 | 26 |
reproductive system | 5.50e-22 | 26 |
gonad | 1.47e-21 | 18 |
gonad primordium | 1.47e-21 | 18 |
reproductive organ | 5.11e-21 | 24 |
testis | 7.61e-17 | 14 |
male reproductive organ | 1.40e-15 | 15 |
male organism | 1.80e-14 | 16 |
male reproductive system | 1.80e-14 | 16 |
female reproductive system | 1.02e-09 | 9 |
body cavity | 5.97e-09 | 37 |
body cavity or lining | 5.97e-09 | 37 |
body cavity precursor | 1.22e-08 | 38 |
anatomical cavity | 2.41e-08 | 39 |
female gonad | 4.69e-08 | 3 |
female organism | 8.21e-08 | 11 |
female reproductive organ | 8.90e-08 | 8 |
parasympathetic nervous system | 1.01e-07 | 3 |