Personal tools

FFCP PHASE1:Mm9::chr18:43847209..43847236,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=76217
|EntrezGene=76217
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=D3YXK0
|UniProt=D3YXK0
|association_with_transcript=190bp_to_ENSMUST00000082254,NM_001163637,uc008euk.2_5end
|association_with_transcript=190bp_to_ENSMUST00000082254,NM_001163637,uc008euk.2_5end
|cluster_id=chr18:43847209..43847236,-
|description=CAGE_peak_2_at_Jakmip2_5end
|description=CAGE_peak_2_at_Jakmip2_5end
|id=chr18:43847209..43847236,-
|id=chr18:43847209..43847236,-
|ontology_enrichment_celltype=CL:0000540!1.34e-15!33;CL:0000047!1.34e-15!33;CL:0000031!1.34e-15!33;CL:0000404!1.34e-15!33;CL:0000221!3.57e-14!44;CL:0000133!3.57e-14!44;CL:0002319!4.30e-14!43;CL:0000117!1.49e-12!23;CL:0000337!1.49e-12!23;CL:0000393!4.32e-11!39;CL:0000211!4.32e-11!39;CL:0000055!5.12e-10!50
|ontology_enrichment_celltype=CL:0000540!1.34e-15!33;CL:0000047!1.34e-15!33;CL:0000031!1.34e-15!33;CL:0000404!1.34e-15!33;CL:0000221!3.57e-14!44;CL:0000133!3.57e-14!44;CL:0002319!4.30e-14!43;CL:0000117!1.49e-12!23;CL:0000337!1.49e-12!23;CL:0000393!4.32e-11!39;CL:0000211!4.32e-11!39;CL:0000055!5.12e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.70e-16,33;CL:0000047,2.70e-16,33;CL:0000031,2.70e-16,33;CL:0000404,2.70e-16,33;CL:0000117,1.46e-15,23;CL:0000337,1.46e-15,23;CL:0000393,2.16e-12,39;CL:0000211,2.16e-12,39;CL:0002319,2.78e-11,43;CL:0000221,7.97e-11,44;CL:0000133,7.97e-11,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.01e-33!75;UBERON:0001016!1.01e-33!75;UBERON:0001017!1.20e-33!73;UBERON:0005743!1.20e-33!73;UBERON:0004121!1.17e-32!102;UBERON:0000924!1.17e-32!102;UBERON:0006601!1.17e-32!102;UBERON:0002346!8.60e-32!71;UBERON:0003075!8.60e-32!71;UBERON:0007284!8.60e-32!71;UBERON:0000033!4.81e-27!63;UBERON:0001049!3.93e-26!52;UBERON:0005068!3.93e-26!52;UBERON:0006241!3.93e-26!52;UBERON:0007135!3.93e-26!52;UBERON:0000955!3.08e-24!50;UBERON:0006238!3.08e-24!50;UBERON:0003056!1.57e-23!49;UBERON:0002616!2.29e-23!49;UBERON:0002020!3.16e-21!34;UBERON:0003080!6.04e-20!40;UBERON:0002780!3.22e-19!39;UBERON:0001890!3.22e-19!39;UBERON:0006240!3.22e-19!39;UBERON:0002791!7.96e-18!29;UBERON:0003528!7.96e-18!29;UBERON:0001893!7.96e-18!29;UBERON:0007811!1.51e-13!86;UBERON:0000956!3.60e-13!21;UBERON:0001869!3.60e-13!21;UBERON:0000203!3.60e-13!21;UBERON:0000153!2.93e-12!94;UBERON:0002619!1.37e-11!17;UBERON:0002021!2.78e-09!10;UBERON:0000411!2.78e-09!10;UBERON:0001950!2.78e-09!10
|ontology_enrichment_uberon=UBERON:0000073!1.01e-33!75;UBERON:0001016!1.01e-33!75;UBERON:0001017!1.20e-33!73;UBERON:0005743!1.20e-33!73;UBERON:0004121!1.17e-32!102;UBERON:0000924!1.17e-32!102;UBERON:0006601!1.17e-32!102;UBERON:0002346!8.60e-32!71;UBERON:0003075!8.60e-32!71;UBERON:0007284!8.60e-32!71;UBERON:0000033!4.81e-27!63;UBERON:0001049!3.93e-26!52;UBERON:0005068!3.93e-26!52;UBERON:0006241!3.93e-26!52;UBERON:0007135!3.93e-26!52;UBERON:0000955!3.08e-24!50;UBERON:0006238!3.08e-24!50;UBERON:0003056!1.57e-23!49;UBERON:0002616!2.29e-23!49;UBERON:0002020!3.16e-21!34;UBERON:0003080!6.04e-20!40;UBERON:0002780!3.22e-19!39;UBERON:0001890!3.22e-19!39;UBERON:0006240!3.22e-19!39;UBERON:0002791!7.96e-18!29;UBERON:0003528!7.96e-18!29;UBERON:0001893!7.96e-18!29;UBERON:0007811!1.51e-13!86;UBERON:0000956!3.60e-13!21;UBERON:0001869!3.60e-13!21;UBERON:0000203!3.60e-13!21;UBERON:0000153!2.93e-12!94;UBERON:0002619!1.37e-11!17;UBERON:0002021!2.78e-09!10;UBERON:0000411!2.78e-09!10;UBERON:0001950!2.78e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.30e-32,73;UBERON:0002346,1.18e-31,64;UBERON:0003075,1.18e-31,64;UBERON:0007284,1.18e-31,64;UBERON:0001016,3.19e-31,75;UBERON:0004121,4.24e-30,95;UBERON:0000924,4.24e-30,95;UBERON:0006601,4.24e-30,95;UBERON:0000073,3.26e-28,54;UBERON:0001049,4.11e-27,52;UBERON:0005068,4.11e-27,52;UBERON:0006241,4.11e-27,52;UBERON:0007135,4.11e-27,52;UBERON:0002020,1.24e-25,34;UBERON:0010371,1.54e-25,73;UBERON:0003056,1.92e-24,49;UBERON:0000955,1.08e-22,47;UBERON:0006238,1.08e-22,47;UBERON:0002616,1.29e-21,46;UBERON:0003528,4.99e-21,29;UBERON:0002791,4.99e-21,29;UBERON:0001893,4.99e-21,29;UBERON:0003080,1.32e-19,40;UBERON:0002780,1.09e-18,39;UBERON:0001890,1.09e-18,39;UBERON:0006240,1.09e-18,39;UBERON:0010314,1.94e-17,92;UBERON:0000956,8.00e-16,21;UBERON:0001869,8.00e-16,21;UBERON:0000203,8.00e-16,21;UBERON:0002619,1.31e-13,17;UBERON:0002021,3.57e-12,10;UBERON:0000411,3.57e-12,10;UBERON:0001950,3.57e-12,10;UBERON:0003076,5.28e-08,12;UBERON:0003057,5.28e-08,12;UBERON:0002240,9.51e-07,6;UBERON:0005174,9.51e-07,6;UBERON:0001137,9.51e-07,6
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,2.22548106945558,2.64495489636016,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,1.76272340924412,1.35005938331691,1.26194976810829,2.85650984403804,2.87129103237098,5.02212276781312,2.58782771749238,1.83843757322004,1.10115880999389,3.44755812830007,2.76491759861238,2.90149833006426,3.29355516968675,3.12548022334056,1.95428099300967,0.56276261003168,4.27835093775068,5.59794312399969,7.54569908235246,4.28718725398191,0.075726193333184,0.831287161174641,0,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,1.04091196059682,0.913396434936424,0.230615497256059,0.452167921657868,0.823120949949934,0.251333182659351,0,0,0,0,0,0,0,3.51336956413857,3.77004072264219,0,0,0,0,5.84183493678809,21.5025283324754,14.827213549318,16.339486098074,16.6215047264715,6.02585329222724,10.3834408363365,0,0,0,1.26265113531884,1.56144531555244,1.37941262660084,1.62055916824814,1.50704817835715,1.49680298132921,2.17793324484245,1.68663104207512,2.06962696591213,0.215567992932842,0.378212160335639,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,6.72927835405207,6.5858951922742,0,0,0.853153002140936,0.232236671860439,0.38660238396628,0.403367049246685,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.799739588268102,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,4.17431533968259,5.04010252346474,0,0,0.631016438832513,0.390438744296638,3.23135096599198,0.477937595905104,1.55959071857676,2.83076530788832,2.02405350837447,2.33804686329049,3.16230222357219,17.3513510867776,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,1.98067203434441,0.258717367565509,0,0.354680467284547,0.891844088010353,1.48094118541909,0.608929898229199,0,0,0,0,0,0,0,0,0.291480836629851,6.30446026835733,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.609958401380546,0.540026704109006,0,0.87345025498471,0.404593039154462,0,0,0.129614973291793,0,0,0,0,0,0.516639293910924,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,14.1187960654267,13.3494318587081,15.4681788628637,12.7171354934329,13.0165678756422,20.3956352295219,14.8504950050997,19.3638117386415,14.0474146785103,11.39072685854,1.03787347584177,2.79317411380722,2.21953687480374,1.45864030240976,1.88651846365184,1.65459157605013,2.889207461421,1.23621034343337,0.962757628775446,1.51618327058278,1.77435509923168,1.69763707247469,2.90288673156635,1.72867911493147,2.69946704091382,2.85776214769844,1.73826488917283,2.31491064556446,1.64834360321323,2.50238164228475,1.37147700954166,1.77475806159337,1.66905332963125,1.45346416632329,1.2234219453993,2.03075058940024,2.0122077016005,0.789209134313529,1.35804113845862,2.24456908663095,1.89816028998679,1.37906275325789,1.22769312950907,1.08455788830176,1.15743966588685,1.49886346762768,0.935726433781634,0.859484216193193,0.956441660344217,0,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,2.22548106945558,2.64495489636016,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,1.76272340924412,1.35005938331691,1.26194976810829,2.85650984403804,2.87129103237098,5.02212276781312,2.58782771749238,1.83843757322004,1.10115880999389,3.44755812830007,2.76491759861238,2.90149833006426,3.29355516968675,3.12548022334056,1.95428099300967,0.56276261003168,4.27835093775068,5.59794312399969,7.54569908235246,4.28718725398191,0.075726193333184,0.831287161174641,0,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,1.04091196059682,0.913396434936424,0.230615497256059,0.452167921657868,0.823120949949934,0.251333182659351,0,0,0,0,0,0,0,3.51336956413857,3.77004072264219,0,0,0,0,5.84183493678809,21.5025283324754,14.827213549318,16.339486098074,16.6215047264715,6.02585329222724,10.3834408363365,0,0,0,1.26265113531884,1.56144531555244,1.37941262660084,1.62055916824814,1.50704817835715,1.49680298132921,2.17793324484245,1.68663104207512,2.06962696591213,0.215567992932842,0.378212160335639,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,6.72927835405207,6.5858951922742,0,0,0.853153002140936,0.232236671860439,0.38660238396628,0.403367049246685,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.799739588268102,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,4.17431533968259,5.04010252346474,0,0,0.631016438832513,0.390438744296638,3.23135096599198,0.477937595905104,1.55959071857676,2.83076530788832,2.02405350837447,2.33804686329049,3.16230222357219,17.3513510867776,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,1.98067203434441,0.258717367565509,0,0.354680467284547,0.891844088010353,1.48094118541909,0.608929898229199,0,0,0,0,0,0,0,0,0.291480836629851,6.30446026835733,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.609958401380546,0.540026704109006,0,0.87345025498471,0.404593039154462,0,0,0.129614973291793,0,0,0,0,0,0.516639293910924,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,14.1187960654267,13.3494318587081,15.4681788628637,12.7171354934329,13.0165678756422,20.3956352295219,14.8504950050997,19.3638117386415,14.0474146785103,11.39072685854,1.03787347584177,2.79317411380722,2.21953687480374,1.45864030240976,1.88651846365184,1.65459157605013,2.889207461421,1.23621034343337,0.962757628775446,1.51618327058278,1.77435509923168,1.69763707247469,2.90288673156635,1.72867911493147,2.69946704091382,2.85776214769844,1.73826488917283,2.31491064556446,1.64834360321323,2.50238164228475,1.37147700954166,1.77475806159337,1.66905332963125,1.45346416632329,1.2234219453993,2.03075058940024,2.0122077016005,0.789209134313529,1.35804113845862,2.24456908663095,1.89816028998679,1.37906275325789,1.22769312950907,1.08455788830176,1.15743966588685,1.49886346762768,0.935726433781634,0.859484216193193,0.956441660344217,0,0.463735671240843
|short_description=p2@Jakmip2
|short_description=p2@Jakmip2
}}
}}

Latest revision as of 07:17, 27 September 2015

Short description:p2@Jakmip2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Jakmip2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 190bp_to_ENSMUST00000082254, NM_001163637, uc008euk.2_5end
EntrezGene:Jakmip2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Jakmip2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F114.83
cortex, adult.CNhs10473.12-14D516.34
cortex, neonate N30.CNhs11107.1392-42F216.62
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B210.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G16.59
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A35.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.70e-1633
neuronal stem cell2.70e-1633
neuroblast2.70e-1633
electrically signaling cell2.70e-1633
CNS neuron (sensu Vertebrata)1.46e-1523
neuroblast (sensu Vertebrata)1.46e-1523
electrically responsive cell2.16e-1239
electrically active cell2.16e-1239
neural cell2.78e-1143
ectodermal cell7.97e-1144
neurectodermal cell7.97e-1144

Uber anatomy
Ontology termp-valuen
central nervous system1.30e-3273
neurectoderm1.18e-3164
neural plate1.18e-3164
presumptive neural plate1.18e-3164
nervous system3.19e-3175
ectoderm-derived structure4.24e-3095
ectoderm4.24e-3095
presumptive ectoderm4.24e-3095
regional part of nervous system3.26e-2854
neural tube4.11e-2752
neural rod4.11e-2752
future spinal cord4.11e-2752
neural keel4.11e-2752
gray matter1.24e-2534
ecto-epithelium1.54e-2573
pre-chordal neural plate1.92e-2449
brain1.08e-2247
future brain1.08e-2247
regional part of brain1.29e-2146
brain grey matter4.99e-2129
regional part of telencephalon4.99e-2129
telencephalon4.99e-2129
anterior neural tube1.32e-1940
regional part of forebrain1.09e-1839
forebrain1.09e-1839
future forebrain1.09e-1839
structure with developmental contribution from neural crest1.94e-1792
cerebral cortex8.00e-1621
cerebral hemisphere8.00e-1621
pallium8.00e-1621
regional part of cerebral cortex1.31e-1317
occipital lobe3.57e-1210
visual cortex3.57e-1210
neocortex3.57e-1210
posterior neural tube5.28e-0812
chordal neural plate5.28e-0812
spinal cord9.51e-076
dorsal region element9.51e-076
dorsum9.51e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:43847209..43847236,-&oldid=4298834"