FFCP PHASE1:Mm9::chr15:92427535..92427552,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=239618 | |EntrezGene=239618 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q5P6,E9Q0V9,Q3UXJ7,Q69Z24 | |UniProt=E9Q5P6,E9Q0V9,Q3UXJ7,Q69Z24 | ||
|association_with_transcript=0bp_to_ENSMUST00000035399,ENSMUST00000166460,NM_001164594,uc007xio.2_5end | |association_with_transcript=0bp_to_ENSMUST00000035399,ENSMUST00000166460,NM_001164594,uc007xio.2_5end | ||
|cluster_id=chr15:92427535..92427552,+ | |||
|description=CAGE_peak_2_at_Pdzrn4_5end | |description=CAGE_peak_2_at_Pdzrn4_5end | ||
|id=chr15:92427535..92427552,+ | |id=chr15:92427535..92427552,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.38e-13!33;CL:0000047!2.38e-13!33;CL:0000031!2.38e-13!33;CL:0000404!2.38e-13!33;CL:0000393!2.09e-10!39;CL:0000211!2.09e-10!39;CL:0000117!4.24e-10!23;CL:0000337!4.24e-10!23;CL:0000221!5.02e-10!44;CL:0000133!5.02e-10!44;CL:0002319!1.58e-09!43;CL:0000055!2.76e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.09e-13,33;CL:0000047,3.09e-13,33;CL:0000031,3.09e-13,33;CL:0000404,3.09e-13,33;CL:0000117,1.55e-12,23;CL:0000337,1.55e-12,23;CL:0000393,1.05e-10,39;CL:0000211,1.05e-10,39;CL:0002613,1.70e-09,3;CL:0002319,2.05e-09,43;CL:0000120,2.32e-09,3;CL:0000221,3.96e-09,44;CL:0000133,3.96e-09,44;CL:0000068,6.62e-08,3;CL:0002202,6.62e-08,3;CL:0000069,6.62e-08,3;CL:0002632,6.62e-08,3;CL:0002368,6.62e-08,3;CL:0000307,6.62e-08,3;CL:0000377,6.62e-08,3;CL:0002321,2.97e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.88e-14!102;UBERON:0000924!3.88e-14!102;UBERON:0006601!3.88e-14!102;UBERON:0000073!2.61e-13!75;UBERON:0001016!2.61e-13!75;UBERON:0001017!2.76e-13!73;UBERON:0005743!2.76e-13!73;UBERON:0002346!3.01e-11!71;UBERON:0003075!3.01e-11!71;UBERON:0007284!3.01e-11!71;UBERON:0001049!5.79e-09!52;UBERON:0005068!5.79e-09!52;UBERON:0006241!5.79e-09!52;UBERON:0007135!5.79e-09!52;UBERON:0000033!3.73e-08!63;UBERON:0002616!1.73e-07!49;UBERON:0000955!4.20e-07!50;UBERON:0006238!4.20e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.62e-08,3;UBERON:0001005,6.62e-08,3;UBERON:0007196,6.62e-08,3;UBERON:0001558,6.62e-08,3;UBERON:0001017,9.60e-08,73;UBERON:0001016,1.97e-07,75 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,4.04632921719196,7.93486468908049,3.1691570175309,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,0.571301968807607,0.441737081903227,1.34739879136449,0.766763768145891,0,1.10115880999389,0.383062014255563,0.46081959976873,7.25374582516066,10.0636407962651,7.8137005583514,1.3959149950069,0,0.916789486660861,0.883885756421003,1.56608848879013,2.05039390407831,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,1.29894624606728,1.26679932737549,1.01104889002957,0,0,0,0.693941307064543,1.52232739156071,0.691846491768175,1.05505848386836,0.470354828542819,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0,0,0,0,0,0.599162557619291,0,0.125654352112864,0.869121600961382,1.02286182932132,0.83115217823824,1.1356888414743,0,0,0,0,0.260240885925407,0,0,1.20563854268572,0.204109497453984,0.768682321709099,0.281105173679186,0.517406741478031,0.215567992932842,0.945530400839096,0.351902248327898,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,1.3377599609307,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.799739588268102,1.1270773567308,1.22190796707189,0.775809948670503,0.420814919341911,0.0632365371242573,0.442830443938806,0.784993639206874,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.814824882210129,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0.315270288212382,0,0.797273843287435,0,0,0,0,0,0,0,0.321101179975584,1.17211686592203,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0.891194696329576,0.566153061577665,0.809621403349789,1.16902343164525,1.18586333383957,0,0.141940085208269,0,0,1.15479086080775,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.727067458955011,0,0,0,0,1.02131881726136,0.18006109403131,0.388076051348264,0.643011105094777,0.532020700926821,0.356737635204141,0.329098041204242,0.608929898229199,0.23467170806371,0,0,0.98931751764888,0,0,0.238744688006273,0.328281799490123,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0.388902376688095,0,0.168956125490778,0,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.563047426353546,0.549454872801795,0,0,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0.103787347584177,1.19707462020309,1.02440163452481,0.486213434136588,1.04806581313991,0.551530525350042,0.44449345560323,0.412070114477788,0.64183841918363,0,0.50695859978048,0.943131706930381,0.936415074698824,0.512201219238954,0.918967503289812,0.952587382566147,0.695305955669133,0.578727661391115,0.824171801606613,0.294397840268795,1.02860775715625,0.70990322463735,0.238436189947321,0.581385666529314,1.2234219453993,0.423073039458382,1.28049581010941,1.57841826862706,0.950628796921032,1.68342681497322,0.474540072496697,0.985044823755635,0.818462086339379,0.77468420592983,0.578719832943424,0.999242311751784,0.701794825336225,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0,0,0.139986421625363,0,0,0,0,0,0,0,4.04632921719196,7.93486468908049,3.1691570175309,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,0.571301968807607,0.441737081903227,1.34739879136449,0.766763768145891,0,1.10115880999389,0.383062014255563,0.46081959976873,7.25374582516066,10.0636407962651,7.8137005583514,1.3959149950069,0,0.916789486660861,0.883885756421003,1.56608848879013,2.05039390407831,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,1.29894624606728,1.26679932737549,1.01104889002957,0,0,0,0.693941307064543,1.52232739156071,0.691846491768175,1.05505848386836,0.470354828542819,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0,0,0,0,0,0.599162557619291,0,0.125654352112864,0.869121600961382,1.02286182932132,0.83115217823824,1.1356888414743,0,0,0,0,0.260240885925407,0,0,1.20563854268572,0.204109497453984,0.768682321709099,0.281105173679186,0.517406741478031,0.215567992932842,0.945530400839096,0.351902248327898,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,1.3377599609307,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.799739588268102,1.1270773567308,1.22190796707189,0.775809948670503,0.420814919341911,0.0632365371242573,0.442830443938806,0.784993639206874,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.814824882210129,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0.315270288212382,0,0.797273843287435,0,0,0,0,0,0,0,0.321101179975584,1.17211686592203,0,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0.891194696329576,0.566153061577665,0.809621403349789,1.16902343164525,1.18586333383957,0,0.141940085208269,0,0,1.15479086080775,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.727067458955011,0,0,0,0,1.02131881726136,0.18006109403131,0.388076051348264,0.643011105094777,0.532020700926821,0.356737635204141,0.329098041204242,0.608929898229199,0.23467170806371,0,0,0.98931751764888,0,0,0.238744688006273,0.328281799490123,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0.388902376688095,0,0.168956125490778,0,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0,0.563047426353546,0.549454872801795,0,0,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0.45032120322422,0,0.51776031175182,0.103787347584177,1.19707462020309,1.02440163452481,0.486213434136588,1.04806581313991,0.551530525350042,0.44449345560323,0.412070114477788,0.64183841918363,0,0.50695859978048,0.943131706930381,0.936415074698824,0.512201219238954,0.918967503289812,0.952587382566147,0.695305955669133,0.578727661391115,0.824171801606613,0.294397840268795,1.02860775715625,0.70990322463735,0.238436189947321,0.581385666529314,1.2234219453993,0.423073039458382,1.28049581010941,1.57841826862706,0.950628796921032,1.68342681497322,0.474540072496697,0.985044823755635,0.818462086339379,0.77468420592983,0.578719832943424,0.999242311751784,0.701794825336225,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p2@Pdzrn4 | |short_description=p2@Pdzrn4 | ||
}} | }} |
Latest revision as of 08:51, 27 September 2015
Short description: | p2@Pdzrn4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pdzrn4_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | 0bp_to_ENSMUST00000035399, ENSMUST00000166460, NM_001164594, uc007xio.2_5end |
EntrezGene: | Pdzrn4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.09e-13 | 33 |
neuronal stem cell | 3.09e-13 | 33 |
neuroblast | 3.09e-13 | 33 |
electrically signaling cell | 3.09e-13 | 33 |
CNS neuron (sensu Vertebrata) | 1.55e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.55e-12 | 23 |
electrically responsive cell | 1.05e-10 | 39 |
electrically active cell | 1.05e-10 | 39 |
striatum neuron | 1.70e-09 | 3 |
neural cell | 2.05e-09 | 43 |
granule cell | 2.32e-09 | 3 |
ectodermal cell | 3.96e-09 | 44 |
neurectodermal cell | 3.96e-09 | 44 |
duct epithelial cell | 6.62e-08 | 3 |
epithelial cell of tracheobronchial tree | 6.62e-08 | 3 |
branched duct epithelial cell | 6.62e-08 | 3 |
epithelial cell of lower respiratory tract | 6.62e-08 | 3 |
respiratory epithelial cell | 6.62e-08 | 3 |
tracheal epithelial cell | 6.62e-08 | 3 |
tracheoblast | 6.62e-08 | 3 |
embryonic cell | 2.97e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
trachea | 6.62e-08 | 3 |
respiratory airway | 6.62e-08 | 3 |
tracheobronchial tree | 6.62e-08 | 3 |
lower respiratory tract | 6.62e-08 | 3 |
central nervous system | 9.60e-08 | 73 |
nervous system | 1.97e-07 | 75 |