FFCP PHASE1:Mm9::chr1:66221860..66221922,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:66221860..66221922,+ to FFCP PHASE1:Mm9::chr1:66221860..66221922,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17756 | |EntrezGene=17756 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80ZL4,Q3TLQ0 | |UniProt=Q80ZL4,Q3TLQ0 | ||
|association_with_transcript=0bp_to_ENSMUST00000114015,ENSMUST00000114017,NM_001039934,NM_008632,uc007bhw.1,uc007bhx.1_5end | |||
|cluster_id=chr1:66221860..66221922,+ | |||
|description=CAGE_peak_1_at_Mtap2_5end | |||
|id=chr1:66221860..66221922,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.45e-08!23;CL:0000337!5.45e-08!23;CL:0000540!9.13e-08!33;CL:0000047!9.13e-08!33;CL:0000031!9.13e-08!33;CL:0000404!9.13e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.17e-08,23;CL:0000337,5.17e-08,23;CL:0000540,8.67e-08,33;CL:0000047,8.67e-08,33;CL:0000031,8.67e-08,33;CL:0000404,8.67e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.69e-23!102;UBERON:0000924!3.69e-23!102;UBERON:0006601!3.69e-23!102;UBERON:0000033!1.31e-22!63;UBERON:0002346!2.26e-22!71;UBERON:0003075!2.26e-22!71;UBERON:0007284!2.26e-22!71;UBERON:0001049!3.11e-20!52;UBERON:0005068!3.11e-20!52;UBERON:0006241!3.11e-20!52;UBERON:0007135!3.11e-20!52;UBERON:0001017!4.61e-20!73;UBERON:0005743!4.61e-20!73;UBERON:0003056!8.45e-20!49;UBERON:0000073!3.19e-19!75;UBERON:0001016!3.19e-19!75;UBERON:0000955!5.83e-19!50;UBERON:0006238!5.83e-19!50;UBERON:0002616!3.01e-18!49;UBERON:0003080!1.83e-16!40;UBERON:0002780!7.49e-16!39;UBERON:0001890!7.49e-16!39;UBERON:0006240!7.49e-16!39;UBERON:0002020!5.41e-15!34;UBERON:0002791!2.21e-13!29;UBERON:0003528!2.21e-13!29;UBERON:0001893!2.21e-13!29;UBERON:0000468!1.65e-12!333;UBERON:0000956!5.40e-11!21;UBERON:0001869!5.40e-11!21;UBERON:0000203!5.40e-11!21;UBERON:0000153!1.37e-10!94;UBERON:0007811!9.69e-10!86;UBERON:0000922!2.06e-09!328;UBERON:0002619!4.18e-09!17;UBERON:0002021!6.13e-08!10;UBERON:0000411!6.13e-08!10;UBERON:0001950!6.13e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.34e-24,73;UBERON:0004121,9.10e-24,95;UBERON:0000924,9.10e-24,95;UBERON:0006601,9.10e-24,95;UBERON:0002346,1.05e-23,64;UBERON:0003075,1.05e-23,64;UBERON:0007284,1.05e-23,64;UBERON:0001049,2.66e-20,52;UBERON:0005068,2.66e-20,52;UBERON:0006241,2.66e-20,52;UBERON:0007135,2.66e-20,52;UBERON:0001017,3.95e-20,73;UBERON:0000073,4.04e-20,54;UBERON:0003056,7.26e-20,49;UBERON:0001016,2.75e-19,75;UBERON:0000955,1.41e-18,47;UBERON:0006238,1.41e-18,47;UBERON:0002616,7.36e-18,46;UBERON:0003080,1.61e-16,40;UBERON:0010314,2.20e-16,92;UBERON:0002780,6.65e-16,39;UBERON:0001890,6.65e-16,39;UBERON:0006240,6.65e-16,39;UBERON:0002020,4.84e-15,34;UBERON:0003528,2.00e-13,29;UBERON:0002791,2.00e-13,29;UBERON:0001893,2.00e-13,29;UBERON:0000956,4.99e-11,21;UBERON:0001869,4.99e-11,21;UBERON:0000203,4.99e-11,21;UBERON:0002619,3.92e-09,17;UBERON:0002021,5.81e-08,10;UBERON:0000411,5.81e-08,10;UBERON:0001950,5.81e-08,10 | |||
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|phase1_expression=20.0186058880992,0,0,0,0.500895729946347,1.51091344720701,2.56973904655078,1.16210991097419,0.563154888606667,1.40438715793196,2.05461561870606,1.03703806693937,0.684802919724823,1.04904482902797,0.999329285446988,0.404950534779652,0,1.89277299214943,1.50825876966313,2.12194825899015,39.1199134694921,0,0,0.159992422793407,0,0,0.430761996159075,0.646413698057667,0,1.26015064879965,0.221730510655305,0,0,0,1.1554064790051,1.16364251750945,1.02084678131185,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,3.12956537739216,10.0291571935005,3.95435128922049,8.1660557611199,3.21968769738334,1.43752564364972,0.838913030288682,0,0,7.97504251711436,12.3209379173665,32.4873418134789,58.4694571884238,59.2469896784677,60.213983333087,4.74382344896785,4.4464739805557,0,0,0,3.89480143673926,7.68436610643109,84.2996548067923,57.5125297293002,68.1452874778478,33.1355141908412,29.154647405613,81.9463446748043,68.1461298939661,70.7798465689716,24.2254938198655,51.5856845864158,48.0788449092042,48.270381309251,55.167049092253,58.3422975023571,31.8268618861574,49.5231096827878,57.4521411640806,87.2100613002056,96.5279995817918,68.0357977262347,3.86203585999239,6.57472572929034,18.2614627882057,3.44169550792555,0.679971333707751,0,0,0,9.83110940922263,0,0,0,16.0561498545416,0,0,0,8.01016851741492,7.60079596425296,6.0662933401774,5.82337786567206,1.8125651855302,12.1722554033156,14.7462527751215,17.354532263792,10.1470818792666,12.3592565253151,14.8161770990988,7.41432888845085,0.247194967734374,4.19338135067744,0.884610551949874,12.6178142958979,4.63767188766826,3.39412677194655,9.31958806090611,124.724619526919,122.526323485871,5.10914110417183,0,0,0,141.552154237557,129.015169994853,321.800795761046,197.985900699003,157.520721715484,139.633565944024,138.554038659865,6.82323737797119,1.99051152976149,1.76905930903572,45.2449990155919,30.9686654251235,40.0029661714243,70.9444791433076,72.0369029254718,83.2766749612253,94.1635844093646,94.0765314579677,53.5515977429762,20.9100953144857,39.5231707550742,38.1813939435769,18.8508329887714,34.4778589039741,55.3720944770245,63.3808980136466,13.5343301436575,0,0,0.284163499395593,5.79952163099405,7.27030785941398,4.8616756594474,4.49814997611899,3.93528463494808,5.39934895105824,2.79040733700489,2.95100741539581,4.2035523252181,5.10135534731789,7.05920095540109,5.6748166682099,4.09359964790931,5.04965265169416,4.16039898157152,148.464703686274,250.366921918799,4.62586296177317,0.793351699990633,17.276348293354,17.6499870613933,19.8455890436024,17.1430995929841,12.008414367623,12.5548913234289,5.69434873853414,4.94096864172033,8.54539709920916,6.36660710531683,9.35827618171777,4.49409704327111,1.72910439899755,3.58454291857861,3.41402221715547,14.9665551518745,5.63538678365402,11.2008230314923,9.89157684554891,9.74887896475428,14.987059298449,13.8753539100826,11.303908404579,8.39100714668244,0.889357881261447,1.66845105716094,5.11053387294328,1.34917267430912,4.66578279193557,7.71766911207734,6.11102044275408,6.32931502391783,4.37765112292595,6.04035109013779,4.31304619582064,3.34926852901653,6.24075346229121,3.53610429125956,1.97337154874103,1.4473305640901,5.91210208533135,13.0749074121634,23.4669566076517,23.9340570943015,17.1323881250607,7.87279409976534,7.14130922658041,7.21994497073856,9.14283835815908,6.2010113101657,5.26200736569707,5.73521601505083,6.73471429276993,6.50920763616802,0,0,13.277635371514,19.0396354950265,146.743239248842,135.14507464081,0.819674726883377,7.82659874333556,17.0374438484779,19.9123759591286,23.0503035574095,15.7719406648684,14.704712489438,24.0615051170508,22.6693992937941,25.4262596382841,26.4842811224171,289.83182741247,7.94864477166304,4.98583690268315,6.18970445543589,27.714980659386,57.080409486184,26.463089340893,27.5114436837923,57.7131544053048,34.5503214670504,56.8755023696266,32.5619649391959,46.8958511025982,54.9005962712471,51.513991543538,32.6797686582496,46.4109944616841,81.7055053809091,49.336739764579,20.4386720376752,38.366329270655,53.3794103263243,44.5922044005176,55.782117984119,24.9661258273971,1.87737366450968,0.63549621259146,9.04166432025344,67.6033637060068,38.9129268337132,41.5556052754994,31.6336711608312,44.9746065301468,3.78925087618806,155.571828386818,1.02522528478712,5.36605856704379,6.66700298530962,2.0720530270516,1.91371918809435,0.915112692826091,0.169978429993855,0.139951452323658,0.138199973804424,3.81868247206045,31.6335993581135,29.8879616676468,21.6010681643603,21.1179178974613,15.7221045897248,12.5423842137883,9.25718704123762,7.85267825952089,2.98114438571124,32.9309835936071,0.56369293868419,22.4274819065968,13.4021377270249,26.8342639914786,27.5110424007567,39.8736456158236,41.6618197192427,33.7229356745831,17.406651174668,5.55643477899814,6.91272015018877,4.74016680942267,7.70355818102624,9.55211901632893,4.93699127315621,4.47566739168704,2.38417625737518,2.04332264183947,1.32920574457119,1.71642964911851,2.209997392995,1.71404514732629,2.0466154955348,2.30908419936791,1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| ||
|short_description=p1@Mtap2 | |||
}} | }} |
Latest revision as of 11:57, 1 October 2015
Short description: | p1@Mtap2 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mtap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000114015, ENSMUST00000114017, NM_001039934, NM_008632, uc007bhw.1, uc007bhx.1_5end |
EntrezGene: | Mtap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.17e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.17e-08 | 23 |
neuron | 8.67e-08 | 33 |
neuronal stem cell | 8.67e-08 | 33 |
neuroblast | 8.67e-08 | 33 |
electrically signaling cell | 8.67e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.34e-24 | 73 |
ectoderm-derived structure | 9.10e-24 | 95 |
ectoderm | 9.10e-24 | 95 |
presumptive ectoderm | 9.10e-24 | 95 |
neurectoderm | 1.05e-23 | 64 |
neural plate | 1.05e-23 | 64 |
presumptive neural plate | 1.05e-23 | 64 |
neural tube | 2.66e-20 | 52 |
neural rod | 2.66e-20 | 52 |
future spinal cord | 2.66e-20 | 52 |
neural keel | 2.66e-20 | 52 |
central nervous system | 3.95e-20 | 73 |
regional part of nervous system | 4.04e-20 | 54 |
pre-chordal neural plate | 7.26e-20 | 49 |
nervous system | 2.75e-19 | 75 |
brain | 1.41e-18 | 47 |
future brain | 1.41e-18 | 47 |
regional part of brain | 7.36e-18 | 46 |
anterior neural tube | 1.61e-16 | 40 |
structure with developmental contribution from neural crest | 2.20e-16 | 92 |
regional part of forebrain | 6.65e-16 | 39 |
forebrain | 6.65e-16 | 39 |
future forebrain | 6.65e-16 | 39 |
gray matter | 4.84e-15 | 34 |
brain grey matter | 2.00e-13 | 29 |
regional part of telencephalon | 2.00e-13 | 29 |
telencephalon | 2.00e-13 | 29 |
cerebral cortex | 4.99e-11 | 21 |
cerebral hemisphere | 4.99e-11 | 21 |
pallium | 4.99e-11 | 21 |
regional part of cerebral cortex | 3.92e-09 | 17 |
occipital lobe | 5.81e-08 | 10 |
visual cortex | 5.81e-08 | 10 |
neocortex | 5.81e-08 | 10 |