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FFCP PHASE1:Mm9::chr3:116415378..116415428,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:116415378..116415428,-
|DHSsupport=NA
|short_description=p3@Slc35a3
|DPIdataset=NA
|description=CAGE_peak_3_at_Slc35a3_5end
|association_with_transcript=139bp_to_ENSMUST00000029569_5end
|EntrezGene=229782
|EntrezGene=229782
|HGNC=
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=Q8R1T4
|UniProt=Q8R1T4
|association_with_transcript=139bp_to_ENSMUST00000029569_5end
|cluster_id=chr3:116415378..116415428,-
|description=CAGE_peak_3_at_Slc35a3_5end
|id=chr3:116415378..116415428,-
|ontology_enrichment_celltype=CL:0002563!4.84e-07!9;CL:0002251!4.84e-07!9;CL:0000066!6.94e-07!25
|ontology_enrichment_celltype_v019_2=CL:0002563,7.50e-10,9;CL:0002251,7.50e-10,9;CL:0000066,2.48e-09,25;CL:0000075,7.82e-08,7;CL:0000239,1.43e-07,6;CL:0000677,1.43e-07,6;CL:0000584,1.43e-07,6;CL:0000223,4.99e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.58e-15!43;UBERON:0005409!3.21e-14!59;UBERON:0000344!3.27e-11!15;UBERON:0004119!1.12e-10!130;UBERON:0000925!1.12e-10!130;UBERON:0006595!1.12e-10!130;UBERON:0001007!1.62e-10!128;UBERON:0001555!1.62e-10!128;UBERON:0007026!1.62e-10!128;UBERON:0002365!2.90e-10!25;UBERON:0002330!2.90e-10!25;UBERON:0009854!3.54e-10!23;UBERON:0009856!3.54e-10!23;UBERON:0001242!6.87e-10!13;UBERON:0000060!6.87e-10!13;UBERON:0001262!6.87e-10!13;UBERON:0004786!6.87e-10!13;UBERON:0002107!9.82e-10!22;UBERON:0007499!9.82e-10!22;UBERON:0006925!9.82e-10!22;UBERON:0009497!9.82e-10!22;UBERON:0000015!9.82e-10!22;UBERON:0002423!9.82e-10!22;UBERON:0006235!9.82e-10!22;UBERON:0008835!9.82e-10!22;UBERON:0003894!9.82e-10!22;UBERON:0004161!9.82e-10!22;UBERON:0008836!9.82e-10!22;UBERON:0004921!1.33e-09!126;UBERON:0004185!1.33e-09!126;UBERON:0005172!1.89e-07!49;UBERON:0005173!1.89e-07!49;UBERON:0002417!1.89e-07!49;UBERON:0000916!1.89e-07!49;UBERON:0003350!4.84e-07!9;UBERON:0004808!4.84e-07!9;UBERON:0001277!4.84e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.13e-24,31;UBERON:0005409,2.35e-23,47;UBERON:0001007,2.89e-16,116;UBERON:0001555,2.89e-16,116;UBERON:0007026,2.89e-16,116;UBERON:0000344,3.84e-16,15;UBERON:0004119,1.18e-15,118;UBERON:0000925,1.18e-15,118;UBERON:0006595,1.18e-15,118;UBERON:0004921,8.09e-15,114;UBERON:0001242,3.82e-14,13;UBERON:0001262,3.82e-14,13;UBERON:0004786,3.82e-14,13;UBERON:0009854,5.76e-11,23;UBERON:0009856,5.76e-11,23;UBERON:0002365,1.64e-10,25;UBERON:0002330,1.64e-10,25;UBERON:0002107,2.50e-10,22;UBERON:0007499,2.50e-10,22;UBERON:0006925,2.50e-10,22;UBERON:0009497,2.50e-10,22;UBERON:0000015,2.50e-10,22;UBERON:0002423,2.50e-10,22;UBERON:0006235,2.50e-10,22;UBERON:0008835,2.50e-10,22;UBERON:0003894,2.50e-10,22;UBERON:0004161,2.50e-10,22;UBERON:0008836,2.50e-10,22;UBERON:0003350,7.50e-10,9;UBERON:0004808,7.50e-10,9;UBERON:0001277,7.50e-10,9;UBERON:0004923,5.31e-09,24;UBERON:0000485,6.44e-09,11;UBERON:0005172,3.87e-07,49;UBERON:0005173,3.87e-07,49;UBERON:0002417,3.87e-07,49;UBERON:0000916,3.87e-07,49;UBERON:0003929,4.08e-07,55
|phase1_expression=0.160148847104794,85.8479502792828,88.7248516809595,103.140296055629,127.728411136319,39.9552667150298,41.5830500260036,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.55129870453209,0.198581902401771,0,56.3173328232792,57.3523202667925,78.6697790837578,70.6449673700883,67.0115533653115,87.410772949932,108.62498592653,60.5324294088982,0,0,0,31.1959749331377,26.0988393212833,25.3170001765338,0,0,0,0,0,0.485510353031154,0.377690453926732,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0.263772575460388,0.365950574409639,0.52091337055676,0,0,0,0.589257170947335,0.284743361598206,0,0.151452386666368,0,0.579728977403356,25.8127163094416,20.3991400112325,41.0174425644741,48.0834548911275,44.8026887097336,17.2746636762055,0,0.519572009205738,0,1.69012103732017,0,0,0,0.216491041011214,0,0.505524445014783,30.7154636444271,0,0.148442139064825,0.346970653532272,1.21786191324856,0.230615497256059,0.150722640552623,0.23517741427141,0.502666365318702,2.22475470960936,0.144599356919912,0,0,0,0,14.9113408974498,0,0.628340120440365,57.7332944771417,0.239630249011841,0,0,0,0,0.251308704225729,0.173824320192276,0.511430914660661,0,0.162241263067758,0.509196819251581,0.373220911830279,1.0108910337347,3.15662783829711,0,0.459804208866946,0.180062129805349,0,0.204109497453984,0.12811372028485,0.187403449119458,2.84573707812917,0,0,0,0,0,0.348252166522167,0,0.59710280045548,0,0.257347907114715,0,0.207125772535502,0.703578179943289,0.180062061461015,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.402619256281115,0.210289948564127,0.205809224758569,131.506675627552,53.6834650326995,0.213288250535234,0.464473343720877,1.67527699718721,8.87407508342707,8.45036566610507,16.1691782195675,46.5038480313621,26.3518327558417,21.8661631656234,15.5186048192098,19.1064805376738,52.1315257019448,46.0374046233099,56.1578390577316,0.379335801906163,0.456994050438915,0,1.62921062276251,2.32742984601151,2.03393877681924,7.96780367765642,18.5988786454299,20.5668333472201,28.5047448659359,49.2111360964667,0.667380422864376,0.393117990226406,1.34917267430912,0.811440485554012,2.41177159752417,3.05551022137704,2.01387296215567,3.40483976227574,10.4333337011471,17.2521847832825,16.0020607497456,20.9065240986756,35.3610429125956,34.803098223251,32.3237159313456,0.369506380333209,0,0.162964976442026,0,0,0,0,0.390267295715598,0,0.44292937929755,0.318909537314974,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,1.37968373152366,0,0,0,0,0,0,0,0.238968797952552,0.445597348164788,0,0,0,0,0,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,1.32745138339963,0,0,0,0.295301892880773,0.614870295887855,3.6179961043551,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,1.02131881726136,0.36012218806262,0.129358683782755,0.643011105094777,0,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,0.63549621259146,3.74898276693435,0,0,0,0.119372344003136,0.656563598980245,39.0584321084,0,0,0,0,0,0,0,0.169978429993855,0,0,11.4560474161814,0.158167996790568,1.42323626988794,1.83609079397062,2.50905955217362,5.24070152990826,4.04593039154462,7.02554373665355,8.11443420150492,32.0148984030728,3.10669656543463,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0,0.25984164595559,0,0.198681354781265,0,0,0,0.15241361331,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.549454872801795,0.214368379079066,2.00628841614145,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0,0,0,0,0.512200817262403,0.243106717068294,0.419226325255965,0.551530525350042,0.888986911206461,1.44224540067226,1.28367683836726,2.77966932940177,0,0.565879024158229,0.936415074698824,1.15245274328765,0.861532034334199,2.38146845641537,0.811190281613988,1.15745532278223,2.47251540481984,1.61918812147837,0,1.24233064311536,1.66905332963125,1.16277133305863,1.31753132581463,1.09998990259179,1.64635175585495,1.05227884575137,1.7654534799962,1.68342681497322,1.06771516311757,0.788035859004508,2.04615521584845,0.929621047115796,0.578719832943424,0.249810577937946,1.87145286756327,1.71896843238639,0.191288332068843,0.220591419119515,0.695603506861264
|phase1_expression=0.160148847104794,85.8479502792828,88.7248516809595,103.140296055629,127.728411136319,39.9552667150298,41.5830500260036,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.55129870453209,0.198581902401771,0,56.3173328232792,57.3523202667925,78.6697790837578,70.6449673700883,67.0115533653115,87.410772949932,108.62498592653,60.5324294088982,0,0,0,31.1959749331377,26.0988393212833,25.3170001765338,0,0,0,0,0,0.485510353031154,0.377690453926732,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0.263772575460388,0.365950574409639,0.52091337055676,0,0,0,0.589257170947335,0.284743361598206,0,0.151452386666368,0,0.579728977403356,25.8127163094416,20.3991400112325,41.0174425644741,48.0834548911275,44.8026887097336,17.2746636762055,0,0.519572009205738,0,1.69012103732017,0,0,0,0.216491041011214,0,0.505524445014783,30.7154636444271,0,0.148442139064825,0.346970653532272,1.21786191324856,0.230615497256059,0.150722640552623,0.23517741427141,0.502666365318702,2.22475470960936,0.144599356919912,0,0,0,0,14.9113408974498,0,0.628340120440365,57.7332944771417,0.239630249011841,0,0,0,0,0.251308704225729,0.173824320192276,0.511430914660661,0,0.162241263067758,0.509196819251581,0.373220911830279,1.0108910337347,3.15662783829711,0,0.459804208866946,0.180062129805349,0,0.204109497453984,0.12811372028485,0.187403449119458,2.84573707812917,0,0,0,0,0,0.348252166522167,0,0.59710280045548,0,0.257347907114715,0,0.207125772535502,0.703578179943289,0.180062061461015,0,0,0,0,0.268273401399619,0.233530684734339,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0.402619256281115,0.210289948564127,0.205809224758569,131.506675627552,53.6834650326995,0.213288250535234,0.464473343720877,1.67527699718721,8.87407508342707,8.45036566610507,16.1691782195675,46.5038480313621,26.3518327558417,21.8661631656234,15.5186048192098,19.1064805376738,52.1315257019448,46.0374046233099,56.1578390577316,0.379335801906163,0.456994050438915,0,1.62921062276251,2.32742984601151,2.03393877681924,7.96780367765642,18.5988786454299,20.5668333472201,28.5047448659359,49.2111360964667,0.667380422864376,0.393117990226406,1.34917267430912,0.811440485554012,2.41177159752417,3.05551022137704,2.01387296215567,3.40483976227574,10.4333337011471,17.2521847832825,16.0020607497456,20.9065240986756,35.3610429125956,34.803098223251,32.3237159313456,0.369506380333209,0,0.162964976442026,0,0,0,0,0.390267295715598,0,0.44292937929755,0.318909537314974,0.163863314715738,0,0.144649058581512,0,0,0.491764273019036,1.37968373152366,0,0,0,0,0,0,0,0.238968797952552,0.445597348164788,0,0,0,0,0,0.141940085208269,0.35613120733451,0.325773918707152,0.164970122972535,1.32745138339963,0,0,0,0.295301892880773,0.614870295887855,3.6179961043551,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,1.02131881726136,0.36012218806262,0.129358683782755,0.643011105094777,0,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,0.63549621259146,3.74898276693435,0,0,0,0.119372344003136,0.656563598980245,39.0584321084,0,0,0,0,0,0,0,0.169978429993855,0,0,11.4560474161814,0.158167996790568,1.42323626988794,1.83609079397062,2.50905955217362,5.24070152990826,4.04593039154462,7.02554373665355,8.11443420150492,32.0148984030728,3.10669656543463,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0,0.25984164595559,0,0.198681354781265,0,0,0,0.15241361331,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.549454872801795,0.214368379079066,2.00628841614145,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0,0,0,0,0.512200817262403,0.243106717068294,0.419226325255965,0.551530525350042,0.888986911206461,1.44224540067226,1.28367683836726,2.77966932940177,0,0.565879024158229,0.936415074698824,1.15245274328765,0.861532034334199,2.38146845641537,0.811190281613988,1.15745532278223,2.47251540481984,1.61918812147837,0,1.24233064311536,1.66905332963125,1.16277133305863,1.31753132581463,1.09998990259179,1.64635175585495,1.05227884575137,1.7654534799962,1.68342681497322,1.06771516311757,0.788035859004508,2.04615521584845,0.929621047115796,0.578719832943424,0.249810577937946,1.87145286756327,1.71896843238639,0.191288332068843,0.220591419119515,0.695603506861264
|short_description=p3@Slc35a3
}}
}}

Latest revision as of 12:09, 1 October 2015

Short description:p3@Slc35a3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Slc35a3_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 139bp_to_ENSMUST00000029569_5end
EntrezGene:Slc35a3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Slc35a3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I585.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I688.72
CD326+ enterocyte, pool1.CNhs13542.11848-124I3103.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I4127.73
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I739.96
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I841.58
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D156.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D257.35
GP2+ M cell, pool1.CNhs13228.11845-124H978.67
GP2+ M cell, pool2.CNhs13231.11846-124I170.64
GP2+ M cell, pool3.CNhs13240.11847-124I267.01
Ileum epithelium, pool1.CNhs13199.10252-104B987.41
Ileum epithelium, pool2.CNhs13232.10253-104C1108.62
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C860.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F531.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F626.10
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F725.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F725.81
Mouse hepatocyte, donor1.CNhs13078.11714-123C420.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C841.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F448.08
Mouse hepatocyte, donor8.CNhs13091.11824-124F644.80
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B630.72
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H757.73
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I3131.51
intestine, adult.CNhs10496.178-9A353.68
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H48.87
intestine, embryo E17.CNhs10582.482-18D38.45
intestine, embryo E18.CNhs10526.1289-20F716.17
intestine, neonate N00.CNhs11126.644-26D146.50
intestine, neonate N01.CNhs11192.1322-23E926.35
intestine, neonate N06.CNhs11102.688-20B821.87
intestine, neonate N07.CNhs11095.720-20F215.52
intestine, neonate N10.CNhs11098.755-23A519.11
intestine, neonate N20.CNhs11187.827-18D152.13
intestine, neonate N25.CNhs11121.1352-25E346.04
intestine, neonate N30.CNhs11131.1384-42G156.16
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.03
kidney, neonate N10.CNhs11206.758-6D57.97
kidney, neonate N20.CNhs11113.832-19I118.60
kidney, neonate N25.CNhs11122.1353-25F320.57
kidney, neonate N30.CNhs11203.1385-42H128.50
liver, adult pregnant day01.CNhs10466.508-5B249.21
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F43.40
liver, neonate N03.CNhs11123.1345-25G210.43
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H216.00
liver, neonate N10.CNhs11115.751-24B920.91
liver, neonate N20.CNhs11220.823-25A335.36
liver, neonate N25.CNhs11198.1368-26H134.80
liver, neonate N30.CNhs11106.1382-42D132.32
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I139.06
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B84.05
stomach, neonate N07.CNhs11210.718-18A97.03
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I132.01
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine2.13e-2431
gastrointestinal system2.35e-2347
digestive system2.89e-16116
digestive tract2.89e-16116
primitive gut2.89e-16116
mucosa3.84e-1615
endoderm-derived structure1.18e-15118
endoderm1.18e-15118
presumptive endoderm1.18e-15118
subdivision of digestive tract8.09e-15114
intestinal mucosa3.82e-1413
wall of intestine3.82e-1413
gastrointestinal system mucosa3.82e-1413
digestive tract diverticulum5.76e-1123
sac5.76e-1123
exocrine gland1.64e-1025
exocrine system1.64e-1025
liver2.50e-1022
epithelial sac2.50e-1022
digestive gland2.50e-1022
epithelium of foregut-midgut junction2.50e-1022
anatomical boundary2.50e-1022
hepatobiliary system2.50e-1022
foregut-midgut junction2.50e-1022
hepatic diverticulum2.50e-1022
liver primordium2.50e-1022
septum transversum2.50e-1022
liver bud2.50e-1022
epithelium of mucosa7.50e-109
gastrointestinal system epithelium7.50e-109
intestinal epithelium7.50e-109
organ component layer5.31e-0924
simple columnar epithelium6.44e-0911
abdomen element3.87e-0749
abdominal segment element3.87e-0749
abdominal segment of trunk3.87e-0749
abdomen3.87e-0749
gut epithelium4.08e-0755
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