FFCP PHASE1:Mm9::chr13:32430369..32430411,-: Difference between revisions
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{{FFCP|EntrezGene=218138|HGNC=|MCL_coexpression_id=395|UniProt=Q8K0C9|association_with_transcript=1bp_to_NM_146041,uc007pzq.1,uc007pzr.1_5end|description=CAGE_peak_2_at_Gmds_5end|id=chr13:32430369..32430411,-|ontology_enrichment_celltype=CL:0002563!5.09e-07!9;CL:0002251!5.09e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,3.83e-07,9;CL:0002251,3.83e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.57e-22!43;UBERON:0005409!3.87e-22!59;UBERON:0000344!1.01e-10!15;UBERON:0001242!1.51e-09!13;UBERON:0000060!1.51e-09!13;UBERON:0001262!1.51e-09!13;UBERON:0004786!1.51e-09!13;UBERON:0002108!9.89e-08!16;UBERON:0003350!5.09e-07!9;UBERON:0004808!5.09e-07!9;UBERON:0001277!5.09e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.87e-18,31;UBERON:0005409,6.54e-18,47;UBERON:0000344,6.27e-11,15;UBERON:0001242,9.98e-10,13;UBERON:0001262,9.98e-10,13;UBERON:0004786,9.98e-10,13;UBERON:0003350,3.83e-07,9;UBERON:0004808,3.83e-07,9;UBERON:0001277,3.83e-07,9|phase1_expression=2.40223270657191,31.4077866875425,21.3849642513082,22.9872800593191,25.5456822272637,34.7510092857612,31.3040938398004,1.29123323441576,0.84473233291,1.40438715793196,1.19852577757853,0.797721589953364,1.54080656938085,1.13646523144697,1.33243904726265,0.404950534779652,0,1.41957974411207,0.411343300817216,0,2.21112554392781,2.08510997521859,1.82839852397255,23.198901305044,29.1349786955306,26.988902313406,32.3071497119306,35.3372821604858,62.1376581622343,49.1458753031865,45.8982157056481,1.27006134691926,1.23012957516914,0,43.3277429626912,45.5482928282269,48.5923067904438,0.837063261473815,0.7813353445238,0.523523743973798,0,0,0,1.76255545165808,0.405507724878058,2.75320128242522,0,1.30815093828268,1.31811709640683,0.777719596297134,1.25987779462826,0,1.17447824240415,0.725362142011344,0.336093799142464,2.31533492432352,0.85960031981627,0,1.01158230429799,2.11596391708813,1.26766280701236,2.03306719241479,4.4464739805557,1.3498495759221,1.97773272513395,0.7104801149461,0.898800331555214,0,0.414758449233911,1.21505344498522,0.630974884054146,1.71390590642282,0.662605622854841,0.857435594504678,0.862609239164127,0,0,0.893811366596314,1.38245879930619,0.791317726381163,1.55528994124096,0.52091337055676,0.558365998002762,1.12552522006336,1.5279824777681,2.65165726926301,2.70506193518296,2.98239113320481,0.681535739998656,0.906858721281426,1.73918693221007,1.72084775396277,0,0.539703191637817,0,0,2.10666630197628,4.4311883870295,6.23486411046885,7.42013106471715,1.69012103732017,2.56652954828636,2.54805239706646,0,1.5154372870785,2.28023878927589,1.01104889002957,7.53613606145796,1.8125651855302,0,1.56136794089522,0.608930956624282,0.691846491768175,0.60289056221049,0.587943535678524,0.628332956648377,3.70792451601561,1.15679485535929,2.65383165584962,2.75003644910596,1.76673214768315,1.93950101254089,44.7340226923493,2.04946557908083,1.25668024088073,38.5740153364973,5.03223522924865,1.19980546198682,3.17675567682662,0.748953197024114,1.37250180845588,0.502617408451458,1.56441888173049,1.27857728665165,1.87009240103604,1.29793010454206,1.01839363850316,2.61254638281195,5.05445516867349,0.210441855886474,3.3831315170303,2.75882525320168,2.88099407688559,1.80845781402858,1.42876648217788,1.92170580427275,1.78033276663485,0.258703370739016,0.646703978798527,2.45837904218165,3.51902248327898,3.06874025398605,1.94633074457919,2.43776516565517,1.64625709126355,0.995171334092466,4.91549231119264,5.91900186363845,0.852490498186778,1.44988040774851,2.34526059981096,0.900310307305074,1.65721314909647,1.18058539048442,1.07986979021165,0,1.07309360559848,1.16765342367169,0.329119699826961,1.14917224855367,0.486412857275134,0.438599962275997,0.439100230582101,0.536825675041487,0.630869845692382,0.823236899034275,12.2254949704005,40.7253872661858,1.91959425481711,3.0190767341857,8.24751752461397,13.1094291005173,13.3426826306922,12.935342575654,21.353807769503,12.3524216043008,10.304743560811,12.5342577385925,10.9179888786707,24.268124033664,22.9106332867176,33.6548751799881,2.84501851429623,2.28497025219458,4.50830942692322,1.4255592949172,2.52138233317913,2.66516115583211,2.15004226222475,0.590440591918409,2.04098346193787,2.96153193412321,0.296452627087149,1.50160595144485,0.982794975566015,0.224862112384854,1.21716072833102,0.241177159752417,0.763877555344259,0,0.810676133875177,0.549122826376163,0,1.11642284300551,0.936113019343682,0.252578877947112,0.538192240565737,0,1.47802552133284,1.89491411770485,2.77040459951444,1.69745085775188,1.64283173801951,2.34508760418542,0.952174563544055,2.92700471786698,0.788175720530955,1.10732344824387,1.59454768657487,0.81931657357869,0.172684981865896,0.289298117163023,1.50791283939272,1.08781136763742,11.3105782794378,4.69092468718045,1.12385412991454,0.937693492737625,5.57378814280696,0.252470927204373,2.52406575533005,3.51394869866975,1.93881057959519,0.955875191810208,0.222798674082394,0.566153061577665,2.42886421004937,0.876767573733936,1.97643888973262,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=218138 | |||
|HGNC= | |||
|MCL_coexpression_id=395 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K0C9 | |||
|association_with_transcript=1bp_to_NM_146041,uc007pzq.1,uc007pzr.1_5end | |||
|cluster_id=chr13:32430369..32430411,- | |||
|description=CAGE_peak_2_at_Gmds_5end | |||
|id=chr13:32430369..32430411,- | |||
|ontology_enrichment_celltype=CL:0002563!5.09e-07!9;CL:0002251!5.09e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.83e-07,9;CL:0002251,3.83e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.57e-22!43;UBERON:0005409!3.87e-22!59;UBERON:0000344!1.01e-10!15;UBERON:0001242!1.51e-09!13;UBERON:0000060!1.51e-09!13;UBERON:0001262!1.51e-09!13;UBERON:0004786!1.51e-09!13;UBERON:0002108!9.89e-08!16;UBERON:0003350!5.09e-07!9;UBERON:0004808!5.09e-07!9;UBERON:0001277!5.09e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.87e-18,31;UBERON:0005409,6.54e-18,47;UBERON:0000344,6.27e-11,15;UBERON:0001242,9.98e-10,13;UBERON:0001262,9.98e-10,13;UBERON:0004786,9.98e-10,13;UBERON:0003350,3.83e-07,9;UBERON:0004808,3.83e-07,9;UBERON:0001277,3.83e-07,9 | |||
|phase1_expression=2.40223270657191,31.4077866875425,21.3849642513082,22.9872800593191,25.5456822272637,34.7510092857612,31.3040938398004,1.29123323441576,0.84473233291,1.40438715793196,1.19852577757853,0.797721589953364,1.54080656938085,1.13646523144697,1.33243904726265,0.404950534779652,0,1.41957974411207,0.411343300817216,0,2.21112554392781,2.08510997521859,1.82839852397255,23.198901305044,29.1349786955306,26.988902313406,32.3071497119306,35.3372821604858,62.1376581622343,49.1458753031865,45.8982157056481,1.27006134691926,1.23012957516914,0,43.3277429626912,45.5482928282269,48.5923067904438,0.837063261473815,0.7813353445238,0.523523743973798,0,0,0,1.76255545165808,0.405507724878058,2.75320128242522,0,1.30815093828268,1.31811709640683,0.777719596297134,1.25987779462826,0,1.17447824240415,0.725362142011344,0.336093799142464,2.31533492432352,0.85960031981627,0,1.01158230429799,2.11596391708813,1.26766280701236,2.03306719241479,4.4464739805557,1.3498495759221,1.97773272513395,0.7104801149461,0.898800331555214,0,0.414758449233911,1.21505344498522,0.630974884054146,1.71390590642282,0.662605622854841,0.857435594504678,0.862609239164127,0,0,0.893811366596314,1.38245879930619,0.791317726381163,1.55528994124096,0.52091337055676,0.558365998002762,1.12552522006336,1.5279824777681,2.65165726926301,2.70506193518296,2.98239113320481,0.681535739998656,0.906858721281426,1.73918693221007,1.72084775396277,0,0.539703191637817,0,0,2.10666630197628,4.4311883870295,6.23486411046885,7.42013106471715,1.69012103732017,2.56652954828636,2.54805239706646,0,1.5154372870785,2.28023878927589,1.01104889002957,7.53613606145796,1.8125651855302,0,1.56136794089522,0.608930956624282,0.691846491768175,0.60289056221049,0.587943535678524,0.628332956648377,3.70792451601561,1.15679485535929,2.65383165584962,2.75003644910596,1.76673214768315,1.93950101254089,44.7340226923493,2.04946557908083,1.25668024088073,38.5740153364973,5.03223522924865,1.19980546198682,3.17675567682662,0.748953197024114,1.37250180845588,0.502617408451458,1.56441888173049,1.27857728665165,1.87009240103604,1.29793010454206,1.01839363850316,2.61254638281195,5.05445516867349,0.210441855886474,3.3831315170303,2.75882525320168,2.88099407688559,1.80845781402858,1.42876648217788,1.92170580427275,1.78033276663485,0.258703370739016,0.646703978798527,2.45837904218165,3.51902248327898,3.06874025398605,1.94633074457919,2.43776516565517,1.64625709126355,0.995171334092466,4.91549231119264,5.91900186363845,0.852490498186778,1.44988040774851,2.34526059981096,0.900310307305074,1.65721314909647,1.18058539048442,1.07986979021165,0,1.07309360559848,1.16765342367169,0.329119699826961,1.14917224855367,0.486412857275134,0.438599962275997,0.439100230582101,0.536825675041487,0.630869845692382,0.823236899034275,12.2254949704005,40.7253872661858,1.91959425481711,3.0190767341857,8.24751752461397,13.1094291005173,13.3426826306922,12.935342575654,21.353807769503,12.3524216043008,10.304743560811,12.5342577385925,10.9179888786707,24.268124033664,22.9106332867176,33.6548751799881,2.84501851429623,2.28497025219458,4.50830942692322,1.4255592949172,2.52138233317913,2.66516115583211,2.15004226222475,0.590440591918409,2.04098346193787,2.96153193412321,0.296452627087149,1.50160595144485,0.982794975566015,0.224862112384854,1.21716072833102,0.241177159752417,0.763877555344259,0,0.810676133875177,0.549122826376163,0,1.11642284300551,0.936113019343682,0.252578877947112,0.538192240565737,0,1.47802552133284,1.89491411770485,2.77040459951444,1.69745085775188,1.64283173801951,2.34508760418542,0.952174563544055,2.92700471786698,0.788175720530955,1.10732344824387,1.59454768657487,0.81931657357869,0.172684981865896,0.289298117163023,1.50791283939272,1.08781136763742,11.3105782794378,4.69092468718045,1.12385412991454,0.937693492737625,5.57378814280696,0.252470927204373,2.52406575533005,3.51394869866975,1.93881057959519,0.955875191810208,0.222798674082394,0.566153061577665,2.42886421004937,0.876767573733936,1.97643888973262,1.92792789853084,2.12910127812403,0.890328018336276,1.95464351224291,2.14461159864296,9.2921596837974,1.45668381692989,3.93020624054176,8.29862350925952,9.44966057218473,7.37844355065426,6.20227903603731,5.81653967164009,5.34746067577082,11.6933600436252,22.1379078007497,11.3449097573006,3.40439605753788,2.16073312837572,3.10460841078611,2.57204442037911,3.19212420556092,1.96205699362278,0.987294123612726,0.608929898229199,1.40803024838226,1.27099242518292,16.5396298541221,0.32977250588296,1.45317984026315,0.72375509913787,0.954978752025092,0.984845398470368,13.4081184849731,1.11255181206306,1.36696704638282,1.23832120777933,1.48155621895769,1.69531611304222,0.546776910884101,0.457556346413045,4.58941760983409,4.05859211738608,3.17859939750175,22.9120948323627,1.42351197111511,4.47302827679067,6.69633113095168,7.73626695253534,11.7915784422936,8.22672512947406,12.5633252702511,18.3229159388821,36.5514224682856,14.9121435140862,1.12738587736838,0.598066184175915,1.82004339502807,1.75006069509643,1.6790777052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| |||
|short_description=p2@Gmds | |||
}} |
Latest revision as of 12:33, 1 October 2015
Short description: | p2@Gmds |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gmds_5end |
Coexpression cluster: | MCL_coexpression_mm9:395 |
Association with transcript: | 1bp_to_NM_146041, uc007pzq.1, uc007pzr.1_5end |
EntrezGene: | Gmds |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.83e-07 | 9 |
epithelial cell of alimentary canal | 3.83e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.87e-18 | 31 |
gastrointestinal system | 6.54e-18 | 47 |
mucosa | 6.27e-11 | 15 |
intestinal mucosa | 9.98e-10 | 13 |
wall of intestine | 9.98e-10 | 13 |
gastrointestinal system mucosa | 9.98e-10 | 13 |
epithelium of mucosa | 3.83e-07 | 9 |
gastrointestinal system epithelium | 3.83e-07 | 9 |
intestinal epithelium | 3.83e-07 | 9 |