Personal tools

FFCP PHASE1:Mm9::chr1:7079268..7079281,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr1:7079268..7079281,+
|DHSsupport=NA
|short_description=p4@Pcmtd1
|DPIdataset=NA
|description=CAGE_peak_4_at_Pcmtd1_5end
|association_with_transcript=267bp_to_ENSMUST00000061280,ENSMUST00000172291,NM_183028,uc007agb.1,uc007agc.1,uc011why.1_5end
|EntrezGene=319263
|EntrezGene=319263
|HGNC=
|HGNC=
|MCL_coexpression_id=1522
|TSSclassifier=NA
|UniProt=P59913,E9QAJ0,Q3TGS5,Q3TSP0,D3Z0C8
|UniProt=P59913,E9QAJ0,Q3TGS5,Q3TSP0,D3Z0C8
|association_with_transcript=267bp_to_ENSMUST00000061280,ENSMUST00000172291,NM_183028,uc007agb.1,uc007agc.1,uc011why.1_5end
|cluster_id=chr1:7079268..7079281,+
|description=CAGE_peak_4_at_Pcmtd1_5end
|id=chr1:7079268..7079281,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!1.58e-08!51;UBERON:0002365!1.93e-07!25;UBERON:0002330!1.93e-07!25;UBERON:0003914!2.83e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.95e-09,25;UBERON:0002330,1.95e-09,25;UBERON:0007023,6.30e-09,51;UBERON:0005256,1.84e-08,45;UBERON:0009854,6.66e-08,23;UBERON:0009856,6.66e-08,23;UBERON:0002107,1.09e-07,22;UBERON:0007499,1.09e-07,22;UBERON:0006925,1.09e-07,22;UBERON:0009497,1.09e-07,22;UBERON:0000015,1.09e-07,22;UBERON:0002423,1.09e-07,22;UBERON:0006235,1.09e-07,22;UBERON:0008835,1.09e-07,22;UBERON:0003894,1.09e-07,22;UBERON:0004161,1.09e-07,22;UBERON:0008836,1.09e-07,22;UBERON:0003914,2.50e-07,47;UBERON:0004111,4.26e-07,122
|phase1_expression=0.320297694209588,0.348975407639361,0,1.20985684522732,1.00179145989269,0.671517087647559,1.16806320297763,2.32421982194837,1.267098499365,0.234064526321993,0,0,2.39681021903688,1.22388563386596,0.333109761815663,1.01237633694913,1.39912375625629,4.41647031501533,5.89592064504677,5.51706547337439,1.87095238332354,0.198581902401771,0.783599367416806,0.799962113967033,0.22940928106717,0,0,0,0.760093677825496,0.504060259519861,0.443461021310609,1.27006134691926,0,15.8481681015439,0.577703239502549,0.332469290716985,1.02084678131185,0,0,0,1.76469446409304,0.683045484958446,0.485510353031154,3.65100772129174,3.85232338634155,4.77221555620372,0,0.436050312760893,0,0.388859798148567,0.419959264876088,1.43752564364972,8.05356509077134,0.725362142011344,3.02484419228218,0.771778308107841,3.43840127926508,2.57836046138721,0.404632921719196,0.528990979272033,0,0.677689064138264,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0.207379224616955,0,0,0.856952953211411,0.662605622854841,0.244981598429908,0.191690942036473,0,0,1.78762273319263,2.30409799884365,0,0,0,1.3959149950069,1.68828783009504,1.83357897332172,0.294628585473668,1.13897344639282,0,0.075726193333184,0.755715601067855,11.8844440367688,5.16254326188832,6.11974200336975,8.63525106620507,12.3457519315057,16.5769948226014,4.21333260395256,1.02258193546835,0.259786004602869,0.70667914902068,0.422530259330042,6.41632387071589,7.64415719119937,0,0.649473123033642,0.253359865475099,0.505524445014783,3.4255163915718,4.91981978929626,4.60170631100957,0.173485326766136,0,0.461230994512117,1.20578112442098,0.705532242814229,2.26199864393416,0.494389935468748,9.54355755671417,0.884610551949874,0.161766849947409,1.32504911076236,0.969750506270444,1.86391761218122,4.68449275218475,1.67557365450764,2.55457055208591,0.11981512450592,2.99951365496704,0.635351135365324,3.44518470631092,2.28750301409313,0,3.12883776346098,1.79000820131231,2.28566849015516,1.94689515681309,0.712875546952214,2.48813941220186,4.29628689337247,3.15662783829711,0.260240885925407,0.229902104433473,0.540186389416048,0.30140963567143,0.748401490664606,0.768682321709099,0.562210347358373,0.776110112217047,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.696504333044333,1.02891068203972,0.199034266818493,0,0.51469581422943,0,0.621377317606506,0.234526059981096,0.36012412292203,0.946978942340841,1.18058539048442,0.462801338662135,0.465067889500816,0.804820204198858,0.934122738937356,0.493679549740441,2.29834449710733,2.83740833410495,2.92399974850665,1.97595103761946,4.96563749413376,1.68231958851302,0.308713837137853,0.660837565967596,0,0.426576501070468,0.464473343720877,0.257734922644187,0.80673409849337,0.667134131534611,0.760902504450237,1.42358718463353,0.988193728344065,1.25667604400135,0.795825888164603,0.58489226135736,0,1.72910439899755,1.39398891278057,0,0.685491075658373,0,0.407302655690628,0.387904974335251,0.771494018793504,1.26473074248515,2.21415221969403,2.66897837330337,3.20832626196681,13.6368208460088,0.166845105716094,0,0.224862112384854,0.405720242777006,1.92941727801933,1.78238096246994,2.5892652370573,2.2698931748505,2.19649130550465,7.18841032636773,1.86070473834252,5.61667811606209,7.32478746046624,3.94674309748207,8.68398338454061,2.95605104266567,0.189491411770485,0.977789858652155,0.339490171550376,0.704070744865506,1.50755631697634,0.952174563544055,0.195133647857799,1.7339865851681,0.8858587585951,0.797273843287435,2.13022309130459,2.07221978239075,4.33947175744535,3.01582567878545,2.71952841909355,4.42587845717133,5.79467167239938,2.40825884981688,3.16471553798949,0.655739781506702,8.07906967053994,1.57754109708128,1.95219372148319,1.07711698866399,1.19484398976276,1.33679204449436,1.69845918473299,1.21443210502468,0.584511715822624,1.58115111178609,2.89189184779626,2.83880170416537,0.35613120733451,1.79175655288934,6.26886467295635,9.2921596837974,0,0.604647113929502,2.26326095707078,1.77181135728464,1.53717573971964,1.55056975900933,2.54473610634254,2.85197902707777,5.37262488490887,3.16255825724996,6.18813259489121,4.08527526904546,0.540183282093931,0.129358683782755,0.643011105094777,1.41872186913819,0.713475270408282,0.493647061806363,0.304464949114599,0.704015124191131,0.21183207086382,4.41056796109924,4.45192882941996,0.645857706783622,1.14594557363496,0.835606408021955,0.492422699235184,0.582961673259701,4.45020724825223,1.19609616558497,0.619160603889667,0.555583582109135,0.565105371014073,1.23024804948923,0.686334519619568,0.509935289981566,0.839708713941948,0.414599921413271,0,0.474503990371703,1.01659733563424,0.86404272657441,0.418176592028937,1.09181281873089,0.674321731924103,1.48776220305605,2.09404753587224,1.55537967950151,4.97071450469541,0.56369293868419,0.299033092087958,0.330916980914195,0.388902376688095,0.516639293910924,1.01373675294467,0.58678619322877,1.17183946359555,1.46803082195995,0.724752362478018,1.15212002503146,0.632022241256357,0.608175645870493,0.308132871494482,0.129920822977795,0.537080087002444,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.457240839929999,0.201652370273681,0.194915761479505,0.288635524920988,0.233753804363138,6.57518112484113,0,0.0897138566094757,0.335769232728157,4.82973985080476,2.25218970541418,3.84618410961257,3.42989406526505,4.51414893631827,1.6942555278512,2.30162618253588,1.71868654031819,0.859265911718438,2.74033007908257,3.7769694869485,3.37511250115903,2.2516060161211,1.81256963593682,1.03552062350364,0.103787347584177,0,0,0.243106717068294,0,0.551530525350042,2.00022055021454,1.03017528619447,0.64183841918363,1.26348605881899,1.77435509923168,1.13175804831646,0.842773567228942,1.28050304809739,0.574354689556133,1.90517476513229,1.15884325944855,1.35036454324594,0.824171801606613,1.47198920134397,1.02860775715625,1.59728225543404,0.715308569841963,1.45346416632329,0.941093804153306,0.761531471025089,0.182927972872773,1.05227884575137,0.950628796921032,1.68342681497322,1.06771516311757,1.37906275325789,0.409231043169689,0.619747364743864,1.35034627686799,0.249810577937946,1.40358965067245,0.859484216193193,0.765153328275374,1.76473135295612,1.85494268496337
|phase1_expression=0.320297694209588,0.348975407639361,0,1.20985684522732,1.00179145989269,0.671517087647559,1.16806320297763,2.32421982194837,1.267098499365,0.234064526321993,0,0,2.39681021903688,1.22388563386596,0.333109761815663,1.01237633694913,1.39912375625629,4.41647031501533,5.89592064504677,5.51706547337439,1.87095238332354,0.198581902401771,0.783599367416806,0.799962113967033,0.22940928106717,0,0,0,0.760093677825496,0.504060259519861,0.443461021310609,1.27006134691926,0,15.8481681015439,0.577703239502549,0.332469290716985,1.02084678131185,0,0,0,1.76469446409304,0.683045484958446,0.485510353031154,3.65100772129174,3.85232338634155,4.77221555620372,0,0.436050312760893,0,0.388859798148567,0.419959264876088,1.43752564364972,8.05356509077134,0.725362142011344,3.02484419228218,0.771778308107841,3.43840127926508,2.57836046138721,0.404632921719196,0.528990979272033,0,0.677689064138264,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0.207379224616955,0,0,0.856952953211411,0.662605622854841,0.244981598429908,0.191690942036473,0,0,1.78762273319263,2.30409799884365,0,0,0,1.3959149950069,1.68828783009504,1.83357897332172,0.294628585473668,1.13897344639282,0,0.075726193333184,0.755715601067855,11.8844440367688,5.16254326188832,6.11974200336975,8.63525106620507,12.3457519315057,16.5769948226014,4.21333260395256,1.02258193546835,0.259786004602869,0.70667914902068,0.422530259330042,6.41632387071589,7.64415719119937,0,0.649473123033642,0.253359865475099,0.505524445014783,3.4255163915718,4.91981978929626,4.60170631100957,0.173485326766136,0,0.461230994512117,1.20578112442098,0.705532242814229,2.26199864393416,0.494389935468748,9.54355755671417,0.884610551949874,0.161766849947409,1.32504911076236,0.969750506270444,1.86391761218122,4.68449275218475,1.67557365450764,2.55457055208591,0.11981512450592,2.99951365496704,0.635351135365324,3.44518470631092,2.28750301409313,0,3.12883776346098,1.79000820131231,2.28566849015516,1.94689515681309,0.712875546952214,2.48813941220186,4.29628689337247,3.15662783829711,0.260240885925407,0.229902104433473,0.540186389416048,0.30140963567143,0.748401490664606,0.768682321709099,0.562210347358373,0.776110112217047,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.696504333044333,1.02891068203972,0.199034266818493,0,0.51469581422943,0,0.621377317606506,0.234526059981096,0.36012412292203,0.946978942340841,1.18058539048442,0.462801338662135,0.465067889500816,0.804820204198858,0.934122738937356,0.493679549740441,2.29834449710733,2.83740833410495,2.92399974850665,1.97595103761946,4.96563749413376,1.68231958851302,0.308713837137853,0.660837565967596,0,0.426576501070468,0.464473343720877,0.257734922644187,0.80673409849337,0.667134131534611,0.760902504450237,1.42358718463353,0.988193728344065,1.25667604400135,0.795825888164603,0.58489226135736,0,1.72910439899755,1.39398891278057,0,0.685491075658373,0,0.407302655690628,0.387904974335251,0.771494018793504,1.26473074248515,2.21415221969403,2.66897837330337,3.20832626196681,13.6368208460088,0.166845105716094,0,0.224862112384854,0.405720242777006,1.92941727801933,1.78238096246994,2.5892652370573,2.2698931748505,2.19649130550465,7.18841032636773,1.86070473834252,5.61667811606209,7.32478746046624,3.94674309748207,8.68398338454061,2.95605104266567,0.189491411770485,0.977789858652155,0.339490171550376,0.704070744865506,1.50755631697634,0.952174563544055,0.195133647857799,1.7339865851681,0.8858587585951,0.797273843287435,2.13022309130459,2.07221978239075,4.33947175744535,3.01582567878545,2.71952841909355,4.42587845717133,5.79467167239938,2.40825884981688,3.16471553798949,0.655739781506702,8.07906967053994,1.57754109708128,1.95219372148319,1.07711698866399,1.19484398976276,1.33679204449436,1.69845918473299,1.21443210502468,0.584511715822624,1.58115111178609,2.89189184779626,2.83880170416537,0.35613120733451,1.79175655288934,6.26886467295635,9.2921596837974,0,0.604647113929502,2.26326095707078,1.77181135728464,1.53717573971964,1.55056975900933,2.54473610634254,2.85197902707777,5.37262488490887,3.16255825724996,6.18813259489121,4.08527526904546,0.540183282093931,0.129358683782755,0.643011105094777,1.41872186913819,0.713475270408282,0.493647061806363,0.304464949114599,0.704015124191131,0.21183207086382,4.41056796109924,4.45192882941996,0.645857706783622,1.14594557363496,0.835606408021955,0.492422699235184,0.582961673259701,4.45020724825223,1.19609616558497,0.619160603889667,0.555583582109135,0.565105371014073,1.23024804948923,0.686334519619568,0.509935289981566,0.839708713941948,0.414599921413271,0,0.474503990371703,1.01659733563424,0.86404272657441,0.418176592028937,1.09181281873089,0.674321731924103,1.48776220305605,2.09404753587224,1.55537967950151,4.97071450469541,0.56369293868419,0.299033092087958,0.330916980914195,0.388902376688095,0.516639293910924,1.01373675294467,0.58678619322877,1.17183946359555,1.46803082195995,0.724752362478018,1.15212002503146,0.632022241256357,0.608175645870493,0.308132871494482,0.129920822977795,0.537080087002444,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.457240839929999,0.201652370273681,0.194915761479505,0.288635524920988,0.233753804363138,6.57518112484113,0,0.0897138566094757,0.335769232728157,4.82973985080476,2.25218970541418,3.84618410961257,3.42989406526505,4.51414893631827,1.6942555278512,2.30162618253588,1.71868654031819,0.859265911718438,2.74033007908257,3.7769694869485,3.37511250115903,2.2516060161211,1.81256963593682,1.03552062350364,0.103787347584177,0,0,0.243106717068294,0,0.551530525350042,2.00022055021454,1.03017528619447,0.64183841918363,1.26348605881899,1.77435509923168,1.13175804831646,0.842773567228942,1.28050304809739,0.574354689556133,1.90517476513229,1.15884325944855,1.35036454324594,0.824171801606613,1.47198920134397,1.02860775715625,1.59728225543404,0.715308569841963,1.45346416632329,0.941093804153306,0.761531471025089,0.182927972872773,1.05227884575137,0.950628796921032,1.68342681497322,1.06771516311757,1.37906275325789,0.409231043169689,0.619747364743864,1.35034627686799,0.249810577937946,1.40358965067245,0.859484216193193,0.765153328275374,1.76473135295612,1.85494268496337
|short_description=p4@Pcmtd1
}}
}}

Latest revision as of 13:09, 1 October 2015

Short description:p4@Pcmtd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Pcmtd1_5end
Coexpression cluster:MCL_coexpression_mm9:1522
Association with transcript: 267bp_to_ENSMUST00000061280, ENSMUST00000172291, NM_183028, uc007agb.1, uc007agc.1, uc011why.1_5end
EntrezGene:Pcmtd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Pcmtd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.90
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.88
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F616.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H94.92
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H19.54
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G12.84
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D24.97
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B213.64
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A37.32
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H24.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.08
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G66.27
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C34.45
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland1.95e-0925
exocrine system1.95e-0925
adult organism6.30e-0951
trunk mesenchyme1.84e-0845
digestive tract diverticulum6.66e-0823
sac6.66e-0823
liver1.09e-0722
epithelial sac1.09e-0722
digestive gland1.09e-0722
epithelium of foregut-midgut junction1.09e-0722
anatomical boundary1.09e-0722
hepatobiliary system1.09e-0722
foregut-midgut junction1.09e-0722
hepatic diverticulum1.09e-0722
liver primordium1.09e-0722
septum transversum1.09e-0722
liver bud1.09e-0722
epithelial tube2.50e-0747
anatomical conduit4.26e-07122
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:7079268..7079281,%2B&oldid=4304541"