Personal tools

FFCP PHASE1:Mm9::chr6:53989491..53989550,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=69993
|EntrezGene=69993
|HGNC=
|HGNC=
|MCL_coexpression_id=30
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000138930_5end
|association_with_transcript=0bp_to_ENSMUST00000138930_5end
|cluster_id=chr6:53989491..53989550,+
|description=CAGE_peak_3_at_Chn2_5end
|description=CAGE_peak_3_at_Chn2_5end
|id=chr6:53989491..53989550,+
|id=chr6:53989491..53989550,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!8.10e-10!122;UBERON:0000025!4.97e-09!114
|ontology_enrichment_uberon=UBERON:0004111!8.10e-10!122;UBERON:0000025!4.97e-09!114
|ontology_enrichment_uberon_v019_2=UBERON:0011216,6.38e-09,194;UBERON:0004111,1.52e-08,122;UBERON:0000025,1.05e-07,114;UBERON:0002021,2.13e-07,10;UBERON:0000411,2.13e-07,10;UBERON:0001950,2.13e-07,10
|phase1_expression=0.320297694209588,2.44282785347553,3.18499467572675,10.5862473957391,9.01612313903425,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0.274228867211478,0.42438965179803,6.37824676133023,0.496454756004426,1.30599894569468,0.639969691173627,2.06468352960453,3.44539178469012,5.59990595006797,2.58565479223067,2.66032787238923,2.77233142735924,1.77384408524244,0,0,0,1.1554064790051,0.664938581433969,0.816677425049476,0.418531630736908,0,0,0,0.683045484958446,0,1.00717454380462,0.912392380975631,0.917733760808408,0,0,0.439372365468944,0,0,1.43752564364972,0,0,0.336093799142464,0.514518872071894,0.85960031981627,1.03134418455488,2.02316460859598,2.64495489636016,0.633831403506179,0,0,0,0,0,0.898800331555214,1.15265491596466,0.622137673850866,1.35005938331691,1.05162480675691,1.42825492201902,2.20868540951614,0.857435594504678,0.670918297127655,0,2.20231761998777,3.06449611404451,2.61131106535614,0.791317726381163,1.46380229763855,0,14.2383329490704,2.25105044012672,2.44477196442896,0.589257170947335,2.70506193518296,0.931997229126503,0.302904773332736,0.226714680320357,7.53647670624362,4.30211938490693,1.3599426674155,8.09554787456726,6.49776417447669,8.06448396775204,5.05599912474307,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,5.48082622651488,0.517875767294343,1.03909497345377,1.21439728736295,0.913396434936424,0.922461989024234,0.753613202763113,1.17588707135705,0.879666139307728,0.247194967734374,0.289198713839823,0,2.42650274921114,1.10420759230197,1.93950101254089,0,179.474628568078,169.023492398458,2.81002760729451,0.718890747035522,0,0.127070227073065,1.04853447583376,2.28750301409313,0.879580464790051,3.99795936442236,3.06858548796397,4.36354893575076,2.75810147215188,0.712875546952214,1.7416975885413,0,1.47309299120532,0.260240885925407,0.689706313300419,0.360124259610698,1.9591626318643,1.49680298132921,2.8185018462667,2.52994656311268,2.84573707812917,0.215567992932842,0.945530400839096,1.75951124163949,0.43839146485515,0.556094498451196,0.348252166522167,1.4404749548556,2.18937693500343,0,0.257347907114715,0.568326998791185,0.207125772535502,0.234526059981096,1.2604344302271,0.23674473558521,1.18058539048442,0.308534225774757,0.465067889500816,1.07309360559848,0.700592054203017,0.658239399653922,0.985004784474571,1.37816976227955,1.16959989940266,1.09775057645525,0.536825675041487,0.630869845692382,2.46971069710283,6.60837565967596,4.49565963328025,0.213288250535234,0.464473343720877,0.902072229254653,0.605050573870028,1.33426826306922,0.951128130562796,3.79623249235609,0.988193728344065,2.76468729680296,1.39269530428806,1.9496408711912,2.69645822596266,2.59365659849633,4.58024928485045,0.758671603812327,0.228497025219458,0,1.22190796707189,0.969762435838129,2.31448205638051,4.17361145020098,4.57591458736767,3.92496819603437,3.33172342588861,7.70776830426587,0.333690211432188,0.196558995113203,0.674586337154561,0.811440485554012,1.4470629585145,1.2731292589071,1.15078454980324,1.62135226775035,4.66754402419738,11.5014565221884,8.55924179637558,11.5453939052387,16.1650481886152,6.27890947326693,4.3419916922703,1.84753190166605,1.89491411770485,1.30371981153621,1.52770577197669,1.40814148973101,0.670025029767263,1.6663054862021,3.31727201358258,2.20689201748667,3.5434350343804,2.55127629851979,1.47476983244164,3.45369963731791,2.4590339958857,0,0,0,0.551873492609465,1.9266070798535,3.5163505977661,0,1.26235463602186,0.631016438832513,1.17131623288992,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,4.17717711348349,1.13552068166615,1.24645922567079,1.14020871547503,1.81467135269789,0,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,1.80899805217755,1.09060118843252,0.712994756769443,0.632073515871632,0,0,1.70219802876894,1.08036656418786,0.646793418913773,1.92903331528433,1.06404140185364,2.31879462882692,2.30368628842969,0.304464949114599,0.469343416127421,0.21183207086382,12.3495902910779,0.98931751764888,0.161464426695906,1.20625849856312,1.3130957840345,1.80554989719567,5.24665505933731,1.48340241608408,0.341741761595705,0.619160603889667,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,6.68269432610579,0,1.42323626988794,1.62008011232702,2.29997125615916,5.24070152990826,3.64133735239016,6.86023682520288,4.18809507174447,3.6292192521702,2.4853572523477,0,0.299033092087958,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.469428954583016,1.3020438484395,0.734015410979976,0.241584120826006,0.576060012515731,0,0.405450430580328,0.513554785824136,0.649604114888975,0.358053391334963,0.198681354781265,0.240390899039938,0.147689527174577,0,0.228620419965,0.201652370273681,0.0974578807397524,0.192423683280659,0.233753804363138,0.453460767230423,0,0,0,3.67060228661162,1.50145980360946,2.01466786693992,1.92931541171159,6.01886524842436,5.64751842617067,3.68260189205742,5.72895513439397,6.01486138202907,6.16574267793578,3.7769694869485,7.42524750254986,8.10578165803597,4.53142408984205,5.1776031175182,0.518936737920883,0.798049746802062,0.853668028770671,0.972426868273176,1.04806581313991,0.919217542250071,1.33348036680969,2.06035057238894,1.28367683836726,1.01078884705519,1.2673964994512,0.754505365544305,0.842773567228942,0.89635213366817,1.20614484806788,1.42888107384922,1.62238056322798,1.92909220463705,1.23625770240992,1.17759136107518,2.05721551431249,1.06485483695602,0.476872379894642,1.16277133305863,1.31753132581463,1.01537529470012,1.46342378298218,0.789209134313529,1.62964936615034,1.68342681497322,1.06771516311757,1.28055827088233,0.818462086339379,1.23949472948773,1.15743966588685,1.74867404556562,1.63752125911786,0.859484216193193,0.382576664137687,1.10295709559758,1.15933917810211
|phase1_expression=0.320297694209588,2.44282785347553,3.18499467572675,10.5862473957391,9.01612313903425,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0.274228867211478,0.42438965179803,6.37824676133023,0.496454756004426,1.30599894569468,0.639969691173627,2.06468352960453,3.44539178469012,5.59990595006797,2.58565479223067,2.66032787238923,2.77233142735924,1.77384408524244,0,0,0,1.1554064790051,0.664938581433969,0.816677425049476,0.418531630736908,0,0,0,0.683045484958446,0,1.00717454380462,0.912392380975631,0.917733760808408,0,0,0.439372365468944,0,0,1.43752564364972,0,0,0.336093799142464,0.514518872071894,0.85960031981627,1.03134418455488,2.02316460859598,2.64495489636016,0.633831403506179,0,0,0,0,0,0.898800331555214,1.15265491596466,0.622137673850866,1.35005938331691,1.05162480675691,1.42825492201902,2.20868540951614,0.857435594504678,0.670918297127655,0,2.20231761998777,3.06449611404451,2.61131106535614,0.791317726381163,1.46380229763855,0,14.2383329490704,2.25105044012672,2.44477196442896,0.589257170947335,2.70506193518296,0.931997229126503,0.302904773332736,0.226714680320357,7.53647670624362,4.30211938490693,1.3599426674155,8.09554787456726,6.49776417447669,8.06448396775204,5.05599912474307,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,5.48082622651488,0.517875767294343,1.03909497345377,1.21439728736295,0.913396434936424,0.922461989024234,0.753613202763113,1.17588707135705,0.879666139307728,0.247194967734374,0.289198713839823,0,2.42650274921114,1.10420759230197,1.93950101254089,0,179.474628568078,169.023492398458,2.81002760729451,0.718890747035522,0,0.127070227073065,1.04853447583376,2.28750301409313,0.879580464790051,3.99795936442236,3.06858548796397,4.36354893575076,2.75810147215188,0.712875546952214,1.7416975885413,0,1.47309299120532,0.260240885925407,0.689706313300419,0.360124259610698,1.9591626318643,1.49680298132921,2.8185018462667,2.52994656311268,2.84573707812917,0.215567992932842,0.945530400839096,1.75951124163949,0.43839146485515,0.556094498451196,0.348252166522167,1.4404749548556,2.18937693500343,0,0.257347907114715,0.568326998791185,0.207125772535502,0.234526059981096,1.2604344302271,0.23674473558521,1.18058539048442,0.308534225774757,0.465067889500816,1.07309360559848,0.700592054203017,0.658239399653922,0.985004784474571,1.37816976227955,1.16959989940266,1.09775057645525,0.536825675041487,0.630869845692382,2.46971069710283,6.60837565967596,4.49565963328025,0.213288250535234,0.464473343720877,0.902072229254653,0.605050573870028,1.33426826306922,0.951128130562796,3.79623249235609,0.988193728344065,2.76468729680296,1.39269530428806,1.9496408711912,2.69645822596266,2.59365659849633,4.58024928485045,0.758671603812327,0.228497025219458,0,1.22190796707189,0.969762435838129,2.31448205638051,4.17361145020098,4.57591458736767,3.92496819603437,3.33172342588861,7.70776830426587,0.333690211432188,0.196558995113203,0.674586337154561,0.811440485554012,1.4470629585145,1.2731292589071,1.15078454980324,1.62135226775035,4.66754402419738,11.5014565221884,8.55924179637558,11.5453939052387,16.1650481886152,6.27890947326693,4.3419916922703,1.84753190166605,1.89491411770485,1.30371981153621,1.52770577197669,1.40814148973101,0.670025029767263,1.6663054862021,3.31727201358258,2.20689201748667,3.5434350343804,2.55127629851979,1.47476983244164,3.45369963731791,2.4590339958857,0,0,0,0.551873492609465,1.9266070798535,3.5163505977661,0,1.26235463602186,0.631016438832513,1.17131623288992,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,4.17717711348349,1.13552068166615,1.24645922567079,1.14020871547503,1.81467135269789,0,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,1.80899805217755,1.09060118843252,0.712994756769443,0.632073515871632,0,0,1.70219802876894,1.08036656418786,0.646793418913773,1.92903331528433,1.06404140185364,2.31879462882692,2.30368628842969,0.304464949114599,0.469343416127421,0.21183207086382,12.3495902910779,0.98931751764888,0.161464426695906,1.20625849856312,1.3130957840345,1.80554989719567,5.24665505933731,1.48340241608408,0.341741761595705,0.619160603889667,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,6.68269432610579,0,1.42323626988794,1.62008011232702,2.29997125615916,5.24070152990826,3.64133735239016,6.86023682520288,4.18809507174447,3.6292192521702,2.4853572523477,0,0.299033092087958,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.469428954583016,1.3020438484395,0.734015410979976,0.241584120826006,0.576060012515731,0,0.405450430580328,0.513554785824136,0.649604114888975,0.358053391334963,0.198681354781265,0.240390899039938,0.147689527174577,0,0.228620419965,0.201652370273681,0.0974578807397524,0.192423683280659,0.233753804363138,0.453460767230423,0,0,0,3.67060228661162,1.50145980360946,2.01466786693992,1.92931541171159,6.01886524842436,5.64751842617067,3.68260189205742,5.72895513439397,6.01486138202907,6.16574267793578,3.7769694869485,7.42524750254986,8.10578165803597,4.53142408984205,5.1776031175182,0.518936737920883,0.798049746802062,0.853668028770671,0.972426868273176,1.04806581313991,0.919217542250071,1.33348036680969,2.06035057238894,1.28367683836726,1.01078884705519,1.2673964994512,0.754505365544305,0.842773567228942,0.89635213366817,1.20614484806788,1.42888107384922,1.62238056322798,1.92909220463705,1.23625770240992,1.17759136107518,2.05721551431249,1.06485483695602,0.476872379894642,1.16277133305863,1.31753132581463,1.01537529470012,1.46342378298218,0.789209134313529,1.62964936615034,1.68342681497322,1.06771516311757,1.28055827088233,0.818462086339379,1.23949472948773,1.15743966588685,1.74867404556562,1.63752125911786,0.859484216193193,0.382576664137687,1.10295709559758,1.15933917810211
|short_description=p3@Chn2
|short_description=p3@Chn2
}}
}}

Latest revision as of 13:43, 1 October 2015

Short description:p3@Chn2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Chn2_5end
Coexpression cluster:MCL_coexpression_mm9:30
Association with transcript: 0bp_to_ENSMUST00000138930_5end
EntrezGene:Chn2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Chn2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.59
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I15.60
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2179.47
cerebellum, neonate N30.CNhs11135.1395-42I2169.02
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G14.58
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D54.17
kidney, neonate N20.CNhs11113.832-19I14.58
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B27.71
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H28.56
liver, neonate N10.CNhs11115.751-24B911.55
liver, neonate N20.CNhs11220.823-25A316.17
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F812.35
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A96.86
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I13.63
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
organ system subdivision6.38e-09194
anatomical conduit1.52e-08122
tube1.05e-07114
occipital lobe2.13e-0710
visual cortex2.13e-0710
neocortex2.13e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:53989491..53989550,%2B&oldid=4305689"