FFCP PHASE1:Mm9::chr11:47192876..47192897,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:47192876..47192897,-
|short_description=p3@Sgcd
|description=CAGE_peak_3_at_Sgcd_5end
|association_with_transcript=-72bp_to_NM_011891,uc007ioz.1_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=24052 | |EntrezGene=24052 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1566 | |||
|TSSclassifier=NA | |||
|UniProt=P82347,Q544D4 | |UniProt=P82347,Q544D4 | ||
|association_with_transcript=-72bp_to_NM_011891,uc007ioz.1_5end | |||
|cluster_id=chr11:47192876..47192897,- | |||
|description=CAGE_peak_3_at_Sgcd_5end | |||
|id=chr11:47192876..47192897,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.34e-10!23;UBERON:0001009!1.34e-10!23;UBERON:0007100!1.04e-09!18;UBERON:0000948!1.04e-09!18;UBERON:0005498!1.04e-09!18;UBERON:0004140!1.04e-09!18;UBERON:0009881!1.04e-09!18;UBERON:0004141!1.04e-09!18;UBERON:0003084!1.04e-09!18;UBERON:0007005!1.04e-09!18;UBERON:0004139!1.04e-09!18;UBERON:0004291!1.04e-09!18;UBERON:0004872!2.61e-08!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.68e-12,18;UBERON:0000948,6.68e-12,18;UBERON:0005498,6.68e-12,18;UBERON:0004140,6.68e-12,18;UBERON:0009881,6.68e-12,18;UBERON:0004141,6.68e-12,18;UBERON:0003084,6.68e-12,18;UBERON:0007005,6.68e-12,18;UBERON:0004139,6.68e-12,18;UBERON:0004291,6.68e-12,18;UBERON:0004535,7.56e-12,23;UBERON:0001009,7.56e-12,23;UBERON:0003102,1.14e-07,22;UBERON:0004872,4.75e-07,33;UBERON:0000026,6.14e-07,12;UBERON:0004708,6.14e-07,12;UBERON:0002101,6.14e-07,12;UBERON:0004357,6.14e-07,12;UBERON:0004347,6.14e-07,12;UBERON:0005732,6.14e-07,12;UBERON:0005733,6.14e-07,12 | |||
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| ||
|short_description=p3@Sgcd | |||
}} | }} |
Latest revision as of 13:45, 1 October 2015
Short description: | p3@Sgcd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sgcd_5end |
Coexpression cluster: | MCL_coexpression_mm9:1566 |
Association with transcript: | -72bp_to_NM_011891, uc007ioz.1_5end |
EntrezGene: | Sgcd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 6.68e-12 | 18 |
heart | 6.68e-12 | 18 |
primitive heart tube | 6.68e-12 | 18 |
primary heart field | 6.68e-12 | 18 |
anterior lateral plate mesoderm | 6.68e-12 | 18 |
heart tube | 6.68e-12 | 18 |
heart primordium | 6.68e-12 | 18 |
cardiac mesoderm | 6.68e-12 | 18 |
cardiogenic plate | 6.68e-12 | 18 |
heart rudiment | 6.68e-12 | 18 |
cardiovascular system | 7.56e-12 | 23 |
circulatory system | 7.56e-12 | 23 |
surface structure | 1.14e-07 | 22 |
splanchnic layer of lateral plate mesoderm | 4.75e-07 | 33 |
appendage | 6.14e-07 | 12 |
paired limb/fin | 6.14e-07 | 12 |
limb | 6.14e-07 | 12 |
paired limb/fin bud | 6.14e-07 | 12 |
limb bud | 6.14e-07 | 12 |
limb/fin field | 6.14e-07 | 12 |
limb field | 6.14e-07 | 12 |