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FFCP PHASE1:Mm9::chrX:133527820..133527847,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:133527820..133527847,+
|DHSsupport=NA
|short_description=p3@Zcchc18
|DPIdataset=NA
|description=CAGE_peak_3_at_Zcchc18_5end
|association_with_transcript=0bp_to_ENSMUST00000033804_5end
|EntrezGene=66995
|EntrezGene=66995
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8VD24
|UniProt=Q8VD24
|association_with_transcript=0bp_to_ENSMUST00000033804_5end
|cluster_id=chrX:133527820..133527847,+
|description=CAGE_peak_3_at_Zcchc18_5end
|id=chrX:133527820..133527847,+
|ontology_enrichment_celltype=CL:0000221!8.20e-13!44;CL:0000133!8.20e-13!44;CL:0000540!1.06e-12!33;CL:0000047!1.06e-12!33;CL:0000031!1.06e-12!33;CL:0000404!1.06e-12!33;CL:0002319!1.62e-12!43;CL:0000117!2.56e-12!23;CL:0000337!2.56e-12!23;CL:0000393!6.05e-09!39;CL:0000211!6.05e-09!39;CL:0000055!9.04e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,5.19e-15,23;CL:0000337,5.19e-15,23;CL:0000221,2.69e-14,44;CL:0000133,2.69e-14,44;CL:0002319,6.23e-14,43;CL:0000540,8.01e-14,33;CL:0000047,8.01e-14,33;CL:0000031,8.01e-14,33;CL:0000404,8.01e-14,33;CL:0000393,5.19e-10,39;CL:0000211,5.19e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.78e-35!73;UBERON:0005743!5.78e-35!73;UBERON:0002346!1.04e-33!71;UBERON:0003075!1.04e-33!71;UBERON:0007284!1.04e-33!71;UBERON:0000073!1.63e-33!75;UBERON:0001016!1.63e-33!75;UBERON:0004121!3.90e-30!102;UBERON:0000924!3.90e-30!102;UBERON:0006601!3.90e-30!102;UBERON:0001049!5.16e-29!52;UBERON:0005068!5.16e-29!52;UBERON:0006241!5.16e-29!52;UBERON:0007135!5.16e-29!52;UBERON:0000033!3.17e-28!63;UBERON:0000955!9.23e-27!50;UBERON:0006238!9.23e-27!50;UBERON:0003056!2.70e-26!49;UBERON:0002616!4.41e-26!49;UBERON:0003080!7.75e-24!40;UBERON:0002780!3.63e-23!39;UBERON:0001890!3.63e-23!39;UBERON:0006240!3.63e-23!39;UBERON:0002020!7.19e-21!34;UBERON:0002791!1.78e-17!29;UBERON:0003528!1.78e-17!29;UBERON:0001893!1.78e-17!29;UBERON:0000153!7.37e-16!94;UBERON:0007811!1.87e-15!86;UBERON:0000956!1.29e-12!21;UBERON:0001869!1.29e-12!21;UBERON:0000203!1.29e-12!21;UBERON:0002619!2.53e-11!17;UBERON:0002021!3.41e-08!10;UBERON:0000411!3.41e-08!10;UBERON:0001950!3.41e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.21e-41,73;UBERON:0002346,4.98e-40,64;UBERON:0003075,4.98e-40,64;UBERON:0007284,4.98e-40,64;UBERON:0001016,9.56e-40,75;UBERON:0000073,3.19e-37,54;UBERON:0001049,2.65e-36,52;UBERON:0005068,2.65e-36,52;UBERON:0006241,2.65e-36,52;UBERON:0007135,2.65e-36,52;UBERON:0004121,5.55e-36,95;UBERON:0000924,5.55e-36,95;UBERON:0006601,5.55e-36,95;UBERON:0010371,1.51e-34,73;UBERON:0003056,5.14e-32,49;UBERON:0000955,8.10e-32,47;UBERON:0006238,8.10e-32,47;UBERON:0002616,5.64e-31,46;UBERON:0003080,1.95e-29,40;UBERON:0002780,1.35e-28,39;UBERON:0001890,1.35e-28,39;UBERON:0006240,1.35e-28,39;UBERON:0010314,1.87e-27,92;UBERON:0002020,1.02e-25,34;UBERON:0003528,1.81e-21,29;UBERON:0002791,1.81e-21,29;UBERON:0001893,1.81e-21,29;UBERON:0000956,2.19e-15,21;UBERON:0001869,2.19e-15,21;UBERON:0000203,2.19e-15,21;UBERON:0002619,9.12e-14,17;UBERON:0002021,7.39e-10,10;UBERON:0000411,7.39e-10,10;UBERON:0001950,7.39e-10,10;UBERON:0001894,7.18e-08,10;UBERON:0006222,7.18e-08,10;UBERON:0002420,3.09e-07,8;UBERON:0007245,3.09e-07,8;UBERON:0010009,3.09e-07,8;UBERON:0010011,3.09e-07,8;UBERON:0000454,3.09e-07,8;UBERON:0003076,3.31e-07,12;UBERON:0003057,3.31e-07,12
|phase1_expression=5.76535849577258,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0,0,0,0,0.262261207256992,0,0,0,0.473193248037357,0.822686601634433,0.84877930359606,3.82694805679814,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,1.30815093828268,3.29529274101708,5.05517737593137,2.09979632438044,2.87505128729943,0.503347818173209,0.725362142011344,0.336093799142464,0,0,0,9.71119012126069,15.340738398889,12.0427966666174,0,0,0,0,0.7104801149461,1.19840044207362,6.91592949578798,1.76272340924412,3.64516033495565,3.15487442027073,23.9946826899195,26.283356373242,4.16468717330844,4.02550978276593,7.35375029288017,2.20231761998777,10.9811110753261,8.1411462625809,12.924856197559,18.2975287204819,11.4600941522487,7.2587579740359,14.6318278608237,13.2934475565825,19.1508580557884,17.0846016958924,13.6071595452469,0,0.226714680320357,0,0,0,0,0,0,1.26399978118577,0,0,0,2.81686839553361,0,0,0,0,0,0,0.45673551887624,0.258937883647172,1.03909497345377,2.77576522825817,2.13125834818499,1.84492397804847,3.61734337326294,3.76283862834255,0.502666365318702,0,0.144599356919912,0,0,0,0,0,6.14839673724249,7.54008144528438,0,0,0,0,18.1246673679835,42.5475560621323,21.7382029155255,28.3333641913411,21.9915293304084,23.6878370797899,26.2830846169767,0.916554274652847,0,0.252722758433675,0.210441855886474,4.81445638962004,4.13823787980251,3.06105620669094,3.31550599238573,4.62648194229029,3.33095672740609,3.93547243150861,2.32833033665114,2.37124792226126,2.08016688184601,0.703804496655795,0.657587197282725,1.39023624612799,0.696504333044333,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,27.7582732104648,20.8896363129947,0,0.264450566663544,0.639864751605702,1.85789337488351,1.03093969057675,0.403367049246685,0,1.33157938278791,0.474529061544512,1.4822905925161,0.251335208800269,1.39269530428806,0.779856348476481,0,0.648414149624083,0.199141273254367,1.51734320762465,1.82797620175566,1.1270773567308,0.814605311381257,0.581857461502877,0.911765658574141,0.0632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.947457058852424,0.488894929326078,0.339490171550376,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,8.83028244932856,11.9555920324047,0,0,1.57754109708128,2.73307121007647,2.36965737506079,0.238968797952552,0.668396022247182,0.566153061577665,1.61924280669958,1.75353514746787,2.37172666767914,16.708708453934,0.141940085208269,0.534196811001766,0.162886959353576,0.329940245945071,0,1.45668381692989,2.41858845571801,0.565815239267694,0.590603785761546,0.614870295887855,1.55056975900933,1.45413491791002,0.712994756769443,0.316036757935816,0,0,8.85142974959849,7.74262704334634,7.76152102696527,8.78781843629528,8.51233121482913,4.63758925765383,7.24015690649332,14.6143175575008,0,0,0,0,0,0,0,0,0.582961673259701,9.82754100655701,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0.414599921413271,0,1.26534397432454,0.813277868507395,0.648032044930808,0,0.87345025498471,1.07891477107857,0.991841468704031,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0.117357238645754,0,0,0.483168241652012,0.288030006257865,0,0,0.308132871494482,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.386379188064381,0,0,0,0,35.0146142422581,33.1434170285167,32.0821487526062,22.3409137046794,21.2375581128899,19.6402413321322,24.300810008345,19.8141329418657,20.8445508132734,19.1571315348173,3.1136204275253,4.38927360741134,2.90247129782028,0.972426868273176,2.51535795153579,2.20612210140017,2.889207461421,2.67845574410562,4.49286893428541,2.77966932940177,4.81610669791456,3.01802146217722,2.62196220915671,2.43295579138503,1.95280594449085,1.42888107384922,1.85414921511769,1.73618298417335,3.70877310722976,4.85756436443511,2.40008476669791,3.19456451086807,2.38436189947321,1.74415699958794,2.1645157495526,2.45382362885862,1.82927972872773,3.41990624869196,2.8518863907631,2.24456908663095,2.37270036248348,2.56111654176465,2.04615521584845,2.32405261778949,2.3148793317737,4.24677982494508,2.57324769289949,2.57845264857958,0.765153328275374,2.42650561031467,0.463735671240843
|phase1_expression=5.76535849577258,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0,0,0,0,0.262261207256992,0,0,0,0.473193248037357,0.822686601634433,0.84877930359606,3.82694805679814,0,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,1.30815093828268,3.29529274101708,5.05517737593137,2.09979632438044,2.87505128729943,0.503347818173209,0.725362142011344,0.336093799142464,0,0,0,9.71119012126069,15.340738398889,12.0427966666174,0,0,0,0,0.7104801149461,1.19840044207362,6.91592949578798,1.76272340924412,3.64516033495565,3.15487442027073,23.9946826899195,26.283356373242,4.16468717330844,4.02550978276593,7.35375029288017,2.20231761998777,10.9811110753261,8.1411462625809,12.924856197559,18.2975287204819,11.4600941522487,7.2587579740359,14.6318278608237,13.2934475565825,19.1508580557884,17.0846016958924,13.6071595452469,0,0.226714680320357,0,0,0,0,0,0,1.26399978118577,0,0,0,2.81686839553361,0,0,0,0,0,0,0.45673551887624,0.258937883647172,1.03909497345377,2.77576522825817,2.13125834818499,1.84492397804847,3.61734337326294,3.76283862834255,0.502666365318702,0,0.144599356919912,0,0,0,0,0,6.14839673724249,7.54008144528438,0,0,0,0,18.1246673679835,42.5475560621323,21.7382029155255,28.3333641913411,21.9915293304084,23.6878370797899,26.2830846169767,0.916554274652847,0,0.252722758433675,0.210441855886474,4.81445638962004,4.13823787980251,3.06105620669094,3.31550599238573,4.62648194229029,3.33095672740609,3.93547243150861,2.32833033665114,2.37124792226126,2.08016688184601,0.703804496655795,0.657587197282725,1.39023624612799,0.696504333044333,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,27.7582732104648,20.8896363129947,0,0.264450566663544,0.639864751605702,1.85789337488351,1.03093969057675,0.403367049246685,0,1.33157938278791,0.474529061544512,1.4822905925161,0.251335208800269,1.39269530428806,0.779856348476481,0,0.648414149624083,0.199141273254367,1.51734320762465,1.82797620175566,1.1270773567308,0.814605311381257,0.581857461502877,0.911765658574141,0.0632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.947457058852424,0.488894929326078,0.339490171550376,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,8.83028244932856,11.9555920324047,0,0,1.57754109708128,2.73307121007647,2.36965737506079,0.238968797952552,0.668396022247182,0.566153061577665,1.61924280669958,1.75353514746787,2.37172666767914,16.708708453934,0.141940085208269,0.534196811001766,0.162886959353576,0.329940245945071,0,1.45668381692989,2.41858845571801,0.565815239267694,0.590603785761546,0.614870295887855,1.55056975900933,1.45413491791002,0.712994756769443,0.316036757935816,0,0,8.85142974959849,7.74262704334634,7.76152102696527,8.78781843629528,8.51233121482913,4.63758925765383,7.24015690649332,14.6143175575008,0,0,0,0,0,0,0,0,0.582961673259701,9.82754100655701,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0.414599921413271,0,1.26534397432454,0.813277868507395,0.648032044930808,0,0.87345025498471,1.07891477107857,0.991841468704031,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0,0,0,0,0.117357238645754,0,0,0.483168241652012,0.288030006257865,0,0,0.308132871494482,0.25984164595559,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.386379188064381,0,0,0,0,35.0146142422581,33.1434170285167,32.0821487526062,22.3409137046794,21.2375581128899,19.6402413321322,24.300810008345,19.8141329418657,20.8445508132734,19.1571315348173,3.1136204275253,4.38927360741134,2.90247129782028,0.972426868273176,2.51535795153579,2.20612210140017,2.889207461421,2.67845574410562,4.49286893428541,2.77966932940177,4.81610669791456,3.01802146217722,2.62196220915671,2.43295579138503,1.95280594449085,1.42888107384922,1.85414921511769,1.73618298417335,3.70877310722976,4.85756436443511,2.40008476669791,3.19456451086807,2.38436189947321,1.74415699958794,2.1645157495526,2.45382362885862,1.82927972872773,3.41990624869196,2.8518863907631,2.24456908663095,2.37270036248348,2.56111654176465,2.04615521584845,2.32405261778949,2.3148793317737,4.24677982494508,2.57324769289949,2.57845264857958,0.765153328275374,2.42650561031467,0.463735671240843
|short_description=p3@Zcchc18
}}
}}

Latest revision as of 15:03, 1 October 2015

Short description:p3@Zcchc18
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Zcchc18_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000033804_5end
EntrezGene:Zcchc18
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Zcchc18

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.06
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.71
Mouse Granule cells, donor2.CNhs12357.11731-123E315.34
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A418.12
corpus striatum, adult.CNhs10487.19-21D842.55
corpus striatum, neonate N00.CNhs11226.630-43F121.74
cortex, adult.CNhs10473.12-14D528.33
cortex, neonate N30.CNhs11107.1392-42F221.99
diencephalon, adult.CNhs10482.20-12F223.69
diencephalon, neonate N30.CNhs11201.1388-42B226.28
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C64.63
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G83.94
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E827.76
hippocampus, neonate N00.CNhs11228.627-43G120.89
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A311.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E67.74
pituitary gland, embryo E13.CNhs11009.370-44C77.76
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B98.51
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F57.24
pituitary gland, neonate N00.CNhs11190.1308-22E914.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C99.83
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A135.01
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.08
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A519.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.84
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.19e-1523
neuroblast (sensu Vertebrata)5.19e-1523
ectodermal cell2.69e-1444
neurectodermal cell2.69e-1444
neural cell6.23e-1443
neuron8.01e-1433
neuronal stem cell8.01e-1433
neuroblast8.01e-1433
electrically signaling cell8.01e-1433
electrically responsive cell5.19e-1039
electrically active cell5.19e-1039

Uber anatomy
Ontology termp-valuen
central nervous system1.21e-4173
neurectoderm4.98e-4064
neural plate4.98e-4064
presumptive neural plate4.98e-4064
nervous system9.56e-4075
regional part of nervous system3.19e-3754
neural tube2.65e-3652
neural rod2.65e-3652
future spinal cord2.65e-3652
neural keel2.65e-3652
ectoderm-derived structure5.55e-3695
ectoderm5.55e-3695
presumptive ectoderm5.55e-3695
ecto-epithelium1.51e-3473
pre-chordal neural plate5.14e-3249
brain8.10e-3247
future brain8.10e-3247
regional part of brain5.64e-3146
anterior neural tube1.95e-2940
regional part of forebrain1.35e-2839
forebrain1.35e-2839
future forebrain1.35e-2839
structure with developmental contribution from neural crest1.87e-2792
gray matter1.02e-2534
brain grey matter1.81e-2129
regional part of telencephalon1.81e-2129
telencephalon1.81e-2129
cerebral cortex2.19e-1521
cerebral hemisphere2.19e-1521
pallium2.19e-1521
regional part of cerebral cortex9.12e-1417
occipital lobe7.39e-1010
visual cortex7.39e-1010
neocortex7.39e-1010
diencephalon7.18e-0810
future diencephalon7.18e-0810
basal ganglion3.09e-078
nuclear complex of neuraxis3.09e-078
aggregate regional part of brain3.09e-078
collection of basal ganglia3.09e-078
cerebral subcortex3.09e-078
posterior neural tube3.31e-0712
chordal neural plate3.31e-0712
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