FFCP PHASE1:Mm9::chrX:136335238..136335263,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12738 | |EntrezGene=12738 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=46 | |||
|TSSclassifier=NA | |||
|UniProt=A3KGB6,O88552 | |UniProt=A3KGB6,O88552 | ||
|association_with_transcript=-83bp_to_NM_016675,uc009ukl.2_5end | |association_with_transcript=-83bp_to_NM_016675,uc009ukl.2_5end | ||
|cluster_id=chrX:136335238..136335263,+ | |||
|description=CAGE_peak_2_at_Cldn2_5end | |description=CAGE_peak_2_at_Cldn2_5end | ||
|id=chrX:136335238..136335263,+ | |id=chrX:136335238..136335263,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!8.26e-10!9;UBERON:0000019!8.26e-10!9;UBERON:0000047!8.26e-10!9;UBERON:0004088!8.26e-10!9;UBERON:0002104!8.26e-10!9;UBERON:0001456!8.26e-10!9;UBERON:0003072!8.26e-10!9;UBERON:0003071!8.26e-10!9;UBERON:0004128!8.26e-10!9;UBERON:0005085!7.75e-08!13;UBERON:0003133!1.06e-07!24;UBERON:0001444!1.12e-07!11;UBERON:0000020!6.96e-07!12;UBERON:0001032!6.96e-07!12;UBERON:0004456!6.96e-07!12;UBERON:0003135!7.51e-07!15;UBERON:0005156!7.65e-07!26;UBERON:0000990!7.65e-07!26 | |ontology_enrichment_uberon=UBERON:0000970!8.26e-10!9;UBERON:0000019!8.26e-10!9;UBERON:0000047!8.26e-10!9;UBERON:0004088!8.26e-10!9;UBERON:0002104!8.26e-10!9;UBERON:0001456!8.26e-10!9;UBERON:0003072!8.26e-10!9;UBERON:0003071!8.26e-10!9;UBERON:0004128!8.26e-10!9;UBERON:0005085!7.75e-08!13;UBERON:0003133!1.06e-07!24;UBERON:0001444!1.12e-07!11;UBERON:0000020!6.96e-07!12;UBERON:0001032!6.96e-07!12;UBERON:0004456!6.96e-07!12;UBERON:0003135!7.51e-07!15;UBERON:0005156!7.65e-07!26;UBERON:0000990!7.65e-07!26 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.27e-20,3;UBERON:0000478,1.27e-20,3;UBERON:0000158,1.27e-20,3;UBERON:0000305,3.44e-16,1;UBERON:0001987,1.29e-08,2;UBERON:0003124,1.29e-08,2;UBERON:0004340,1.29e-08,2;UBERON:0006554,5.34e-08,18;UBERON:0001008,1.30e-07,19;UBERON:0004175,1.63e-07,9;UBERON:0000970,2.19e-07,9;UBERON:0000019,2.19e-07,9;UBERON:0000047,2.19e-07,9;UBERON:0010312,2.19e-07,9;UBERON:0004088,2.19e-07,9;UBERON:0002104,2.19e-07,9;UBERON:0001456,2.19e-07,9;UBERON:0003072,2.19e-07,9;UBERON:0004128,2.19e-07,9;UBERON:0003071,2.19e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0,0,67.7314211592184,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0,0,0.162241263067758,0.407357455401265,0.995255764880744,2.0217820674694,0.841767423545896,0.130120442962704,0.229902104433473,0,0.753524089178575,0.884474488967262,0.512454881139399,1.12442069471675,1.29351685369508,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,1.03327103585722,0.784993639206874,0.370191491765402,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0.486405680325106,0,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0.164549020602121,0.608929898229199,0.938686832254841,1.48282449604674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0,0.237270036248348,0,0,0.309873682371932,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0,0,67.7314211592184,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0,0,0,0.162241263067758,0.407357455401265,0.995255764880744,2.0217820674694,0.841767423545896,0.130120442962704,0.229902104433473,0,0.753524089178575,0.884474488967262,0.512454881139399,1.12442069471675,1.29351685369508,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,1.03327103585722,0.784993639206874,0.370191491765402,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0.486405680325106,0,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0.356737635204141,0.164549020602121,0.608929898229199,0.938686832254841,1.48282449604674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0,0.237270036248348,0,0,0.309873682371932,0,0,0,0,0,0,0 | ||
|short_description=p2@Cldn2 | |short_description=p2@Cldn2 | ||
}} | }} |
Latest revision as of 15:25, 1 October 2015
Short description: | p2@Cldn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cldn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | -83bp_to_NM_016675, uc009ukl.2_5end |
EntrezGene: | Cldn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.27e-20 | 3 |
extraembryonic structure | 1.27e-20 | 3 |
membranous layer | 1.27e-20 | 3 |
amnion | 3.44e-16 | 1 |
placenta | 1.29e-08 | 2 |
chorion | 1.29e-08 | 2 |
allantois | 1.29e-08 | 2 |
urinary system structure | 5.34e-08 | 18 |
renal system | 1.30e-07 | 19 |
internal genitalia | 1.63e-07 | 9 |
eye | 2.19e-07 | 9 |
camera-type eye | 2.19e-07 | 9 |
simple eye | 2.19e-07 | 9 |
immature eye | 2.19e-07 | 9 |
ocular region | 2.19e-07 | 9 |
visual system | 2.19e-07 | 9 |
face | 2.19e-07 | 9 |
optic cup | 2.19e-07 | 9 |
optic vesicle | 2.19e-07 | 9 |
eye primordium | 2.19e-07 | 9 |