FFCP PHASE1:Mm9::chr13:44825963..44825967,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16468 | |EntrezGene=16468 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q62315 | |UniProt=Q62315 | ||
|association_with_transcript=-175bp_to_ENSMUST00000173704,NM_001205044,NM_021878_5end | |association_with_transcript=-175bp_to_ENSMUST00000173704,NM_001205044,NM_021878_5end | ||
|cluster_id=chr13:44825963..44825967,+ | |||
|description=CAGE_peak_12_at_Jarid2_5end | |description=CAGE_peak_12_at_Jarid2_5end | ||
|id=chr13:44825963..44825967,+ | |id=chr13:44825963..44825967,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.28e-07,6;CL:0002489,1.28e-07,6;CL:0000898,1.28e-07,6;CL:0000809,1.28e-07,6;CL:0000810,1.28e-07,6;CL:0000895,1.28e-07,6;CL:0000808,1.28e-07,6;CL:0000894,1.28e-07,6;CL:0000806,1.28e-07,6;CL:0000807,1.28e-07,6;CL:0000805,1.28e-07,6;CL:0002425,1.28e-07,6;CL:0002436,1.28e-07,6;CL:0002427,1.28e-07,6;CL:0002428,1.28e-07,6;CL:0002429,1.28e-07,6;CL:0002433,1.28e-07,6;CL:0002431,1.28e-07,6;CL:0002432,1.28e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,1.20985684522732,1.50268718983904,0.671517087647559,0.700837921786577,0,1.12630977721333,4.21316147379588,1.02730780935303,0.159544317990673,0,0.262261207256992,0.333109761815663,0.607425802169478,0,0.473193248037357,0.411343300817216,0,0.0850432901510698,0.297872853602656,0,0.319984845586813,0.22940928106717,1.14846392823004,0.430761996159075,0.646413698057667,0.950117097281869,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0.671130424230945,0.725362142011344,0.672187598284928,0.257259436035947,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0,0,0.420649922702764,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0.395658863190582,0.0914876436024097,0,0,0,0,0,0,0,0.227178579999552,0.226714680320357,0,0.860423876981386,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0,0.461230994512117,0.301445281105245,0.352766121407114,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0,0.510914110417183,0.11981512450592,0,0.127070227073065,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0,0,0.203678727700633,0.373220911830279,0.252722758433675,0.210441855886474,0.780722657776222,0,0.180062129805349,0.150704817835715,0.340182495756639,0.768682321709099,0.374806898238915,0.258703370739016,0.646703978798527,0.756424320671277,0.703804496655795,1.09597866213787,0.834141747676794,0.348252166522167,0.823128545631774,1.19420560091096,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.393528463494808,0,0.232533944750408,0,0.467061369468678,0.16455984991348,0.164167464079095,0.648550476366846,0.292399974850665,0.878200461164203,0.268412837520744,0,0,0.660837565967596,0.264450566663544,0.426576501070468,0.464473343720877,0.644337306610467,0,0,0,0.949058123089023,0.164698954724011,0,0,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.581857461502877,0.420814919341911,0.569128834118316,0.147610147979602,0.784993639206874,0.246794327843601,0,1.00107063429656,0.196558995113203,1.12431056192427,0.202860121388503,2.17059443777175,0.50925170356284,0.575392274901621,0,0,0,0.744281895337007,0,0,0.179397413521912,0,0,0.37898282354097,0.162964976442026,0.678980343100753,0.469380496577004,1.00503754465089,0.238043640886014,0,0.472905432318573,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,1.50791283939272,0.54390568381871,0,0.827810238914197,0,0,0,0,0,0.390438744296638,0.430846795465598,0.716906393857656,0.668396022247182,0.849229592366497,1.21443210502468,0.292255857911312,0.395287777946524,0,0.425820255624806,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.517434735131018,0.214337035031592,0.532020700926821,0.356737635204141,0.329098041204242,0,0.704015124191131,0.847328283455281,0.220528398054962,0.32977250588296,0,0.482503399425247,0.835606408021955,0.820704498725306,0.874442509889552,0,0.854354403989263,1.03193433981611,0.740778109478847,0.565105371014073,1.23024804948923,0.915112692826091,0,0,0,0,0.474503990371703,0.609958401380546,0.324016022465404,0.418176592028937,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.259229946583586,0,0.56369293868419,0.747582730219894,0.330916980914195,0,0.387479470433193,0.675824501963113,0.469428954583016,0.651021924219751,0.419437377702843,0.241584120826006,0.576060012515731,0,0.202725215290164,0.410843828659309,0.129920822977795,0.179026695667481,0,0.721172697119813,0.295379054349154,0.504832249740738,0.228620419965,0.403304740547362,0.38983152295901,0,0.350630706544707,0.226730383615211,0.443971906748129,0.807424709485281,0.335769232728157,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,1.19707462020309,0.512200817262403,0.243106717068294,0.838452650511929,0,1.33348036680969,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.565879024158229,0.561849044819294,0.576226371643824,0.34461281373368,0.476293691283074,0.347652977834566,0,0,0.735994600671987,0.342869252385415,0.354951612318675,0.476872379894642,0.726732083161643,0.658765662907314,0.676916863133412,0,0.263069711437843,0.407412341537585,1.12228454331548,0.237270036248348,0.197008964751127,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0.463735671240843 | |phase1_expression=0,0.697950815278722,0.454999239389536,1.20985684522732,1.50268718983904,0.671517087647559,0.700837921786577,0,1.12630977721333,4.21316147379588,1.02730780935303,0.159544317990673,0,0.262261207256992,0.333109761815663,0.607425802169478,0,0.473193248037357,0.411343300817216,0,0.0850432901510698,0.297872853602656,0,0.319984845586813,0.22940928106717,1.14846392823004,0.430761996159075,0.646413698057667,0.950117097281869,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0.671130424230945,0.725362142011344,0.672187598284928,0.257259436035947,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0,0,0.420649922702764,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0.395658863190582,0.0914876436024097,0,0,0,0,0,0,0,0.227178579999552,0.226714680320357,0,0.860423876981386,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0,0.461230994512117,0.301445281105245,0.352766121407114,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0,0.510914110417183,0.11981512450592,0,0.127070227073065,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0,0,0.203678727700633,0.373220911830279,0.252722758433675,0.210441855886474,0.780722657776222,0,0.180062129805349,0.150704817835715,0.340182495756639,0.768682321709099,0.374806898238915,0.258703370739016,0.646703978798527,0.756424320671277,0.703804496655795,1.09597866213787,0.834141747676794,0.348252166522167,0.823128545631774,1.19420560091096,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.393528463494808,0,0.232533944750408,0,0.467061369468678,0.16455984991348,0.164167464079095,0.648550476366846,0.292399974850665,0.878200461164203,0.268412837520744,0,0,0.660837565967596,0.264450566663544,0.426576501070468,0.464473343720877,0.644337306610467,0,0,0,0.949058123089023,0.164698954724011,0,0,0,0,0.432276099749388,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.581857461502877,0.420814919341911,0.569128834118316,0.147610147979602,0.784993639206874,0.246794327843601,0,1.00107063429656,0.196558995113203,1.12431056192427,0.202860121388503,2.17059443777175,0.50925170356284,0.575392274901621,0,0,0,0.744281895337007,0,0,0.179397413521912,0,0,0.37898282354097,0.162964976442026,0.678980343100753,0.469380496577004,1.00503754465089,0.238043640886014,0,0.472905432318573,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.144649058581512,1.50791283939272,0.54390568381871,0,0.827810238914197,0,0,0,0,0,0.390438744296638,0.430846795465598,0.716906393857656,0.668396022247182,0.849229592366497,1.21443210502468,0.292255857911312,0.395287777946524,0,0.425820255624806,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.517434735131018,0.214337035031592,0.532020700926821,0.356737635204141,0.329098041204242,0,0.704015124191131,0.847328283455281,0.220528398054962,0.32977250588296,0,0.482503399425247,0.835606408021955,0.820704498725306,0.874442509889552,0,0.854354403989263,1.03193433981611,0.740778109478847,0.565105371014073,1.23024804948923,0.915112692826091,0,0,0,0,0.474503990371703,0.609958401380546,0.324016022465404,0.418176592028937,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.259229946583586,0,0.56369293868419,0.747582730219894,0.330916980914195,0,0.387479470433193,0.675824501963113,0.469428954583016,0.651021924219751,0.419437377702843,0.241584120826006,0.576060012515731,0,0.202725215290164,0.410843828659309,0.129920822977795,0.179026695667481,0,0.721172697119813,0.295379054349154,0.504832249740738,0.228620419965,0.403304740547362,0.38983152295901,0,0.350630706544707,0.226730383615211,0.443971906748129,0.807424709485281,0.335769232728157,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.62272408550506,1.19707462020309,0.512200817262403,0.243106717068294,0.838452650511929,0,1.33348036680969,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.565879024158229,0.561849044819294,0.576226371643824,0.34461281373368,0.476293691283074,0.347652977834566,0,0,0.735994600671987,0.342869252385415,0.354951612318675,0.476872379894642,0.726732083161643,0.658765662907314,0.676916863133412,0,0.263069711437843,0.407412341537585,1.12228454331548,0.237270036248348,0.197008964751127,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0.463735671240843 | ||
|short_description=p12@Jarid2 | |short_description=p12@Jarid2 | ||
}} | }} |
Latest revision as of 15:38, 1 October 2015
Short description: | p12@Jarid2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Jarid2_5end |
Coexpression cluster: | NA |
Association with transcript: | -175bp_to_ENSMUST00000173704, NM_001205044, NM_021878_5end |
EntrezGene: | Jarid2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 1.28e-07 | 6 |
double negative thymocyte | 1.28e-07 | 6 |
naive T cell | 1.28e-07 | 6 |
double-positive, alpha-beta thymocyte | 1.28e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 1.28e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.28e-07 | 6 |
DN4 thymocyte | 1.28e-07 | 6 |
DN1 thymic pro-T cell | 1.28e-07 | 6 |
DN2 thymocyte | 1.28e-07 | 6 |
DN3 thymocyte | 1.28e-07 | 6 |
immature single positive thymocyte | 1.28e-07 | 6 |
early T lineage precursor | 1.28e-07 | 6 |
mature CD4 single-positive thymocyte | 1.28e-07 | 6 |
resting double-positive thymocyte | 1.28e-07 | 6 |
double-positive blast | 1.28e-07 | 6 |
CD69-positive double-positive thymocyte | 1.28e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.28e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.28e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.28e-07 | 6 |