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FFCP PHASE1:Mm9::chr18:69504123..69504155,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr18:69504123..69504155,+
|DHSsupport=NA
|short_description=p5@Tcf4
|DPIdataset=NA
|description=CAGE_peak_5_at_Tcf4_5end
|association_with_transcript=0bp_to_ENSMUST00000128706,NM_013685,uc008fnp.1,uc008fnq.1,uc012ben.1_5end
|EntrezGene=21413
|EntrezGene=21413
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q60722,Q8BPX7,Q3UZE5
|UniProt=Q60722,Q8BPX7,Q3UZE5
|association_with_transcript=0bp_to_ENSMUST00000128706,NM_013685,uc008fnp.1,uc008fnq.1,uc012ben.1_5end
|cluster_id=chr18:69504123..69504155,+
|description=CAGE_peak_5_at_Tcf4_5end
|id=chr18:69504123..69504155,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!6.66e-09!94;UBERON:0003056!1.97e-08!49;UBERON:0000468!6.84e-08!333;UBERON:0000033!7.64e-08!63;UBERON:0000956!1.09e-07!21;UBERON:0001869!1.09e-07!21;UBERON:0000203!1.09e-07!21;UBERON:0002346!4.24e-07!71;UBERON:0003075!4.24e-07!71;UBERON:0007284!4.24e-07!71;UBERON:0002780!9.86e-07!39;UBERON:0001890!9.86e-07!39;UBERON:0006240!9.86e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.62e-08,49;UBERON:0002346,2.67e-08,64;UBERON:0003075,2.67e-08,64;UBERON:0007284,2.67e-08,64;UBERON:0000956,7.55e-08,21;UBERON:0001869,7.55e-08,21;UBERON:0000203,7.55e-08,21;UBERON:0010371,8.91e-08,73;UBERON:0000955,2.07e-07,47;UBERON:0006238,2.07e-07,47;UBERON:0002616,5.97e-07,46;UBERON:0002780,8.69e-07,39;UBERON:0001890,8.69e-07,39;UBERON:0006240,8.69e-07,39
|phase1_expression=3.68342348341026,0,0,1.20985684522732,0.500895729946347,0,0,0.258246646883153,0.140788722151667,0,0.171217968225505,0,0.171200729931206,0,0,1.21485160433896,0.699561878128147,1.41957974411207,0.959801035240171,0.84877930359606,2.21112554392781,0.595745707205312,0.261199789138935,0.799962113967033,0.45881856213434,0,0,0,0.190023419456374,1.00812051903972,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.166234645358492,0.408338712524738,0.418531630736908,0,0,0.588231488031014,0,0,1.38486499773135,0.912392380975631,0.917733760808408,0,0.218025156380447,1.31811709640683,0.194429899074283,0.55994568650145,0,1.34226084846189,0.725362142011344,0,0.257259436035947,0.573066879877513,0.515672092277442,2.42779753031517,0,2.53532561402472,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,1.15265491596466,9.02099627083756,6.34527910158946,7.36137364729837,0.571301968807607,3.75476519617743,4.16468717330844,3.06705507258356,4.5960939330501,0,1.53224805702225,1.99688493233117,2.1101806036831,1.00636407962651,3.64639359389732,1.95428099300967,0.56276261003168,3.0559649555362,2.06240009831567,3.98640706237488,4.10078780815661,0.227178579999552,0.453429360640713,4.34796733052517,1.72084775396277,0,0.539703191637817,0.649776417447669,1.79210754838934,0.702222100658759,0.340860645156116,0.779358013808606,0,2.81686839553361,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.68510327831436,0.776813650941515,2.67195850316685,2.4287945747259,1.21786191324856,1.84492397804847,1.20578112442098,3.29248379979973,0.879666139307728,0.494389935468748,2.4581890676385,0,5.17653919831709,2.42925670306433,3.87900202508178,5.59175283654366,30.7419836862124,34.3492599174066,0.766371165625774,1.7972268675888,0.599902730993408,1.14363204365758,2.24685959107234,1.83000241127451,3.76963056338593,9.73416193076748,12.2743419518559,4.77912502486988,4.70499662896497,3.66621709861139,2.98576729464223,1.76905930903572,2.10441855886474,4.16385417480652,3.21862946206862,3.96136685571768,5.12396380641431,8.02830689985669,6.02134485338794,6.27801554550183,3.3631438196072,7.76044774558232,13.4265316919152,17.067259043903,6.79506770525482,9.17555922444473,5.57203466435466,4.11564272815887,4.37875387000685,0,1.28673953557358,1.42081749697796,2.27838349789052,1.87620847984877,1.80062061461015,4.26140524053378,4.13204886669548,2.77680803197281,3.0229412817553,0.804820204198858,5.3712057488898,3.29119699826961,2.95501435342371,3.4859588104718,2.04679982395465,2.63460138349261,2.95254121272818,14.2997165023607,9.15851050175631,1.65209391491899,1.05780226665418,4.90562976231038,5.57368012465052,5.15469845288373,3.63030344322017,1.33426826306922,2.09248188723815,1.89811624617805,1.4822905925161,3.2673577144035,2.58643413653496,3.8992817423824,2.69645822596266,1.72910439899755,1.1948476395262,1.89667900953082,2.97046132785295,2.25415471346161,5.09128319613286,4.26695471768777,5.6810014111158,5.88099795255593,3.69025369949005,2.19798218977925,2.59134044235781,1.1858105083486,1.16791574001266,1.57247196090562,0.224862112384854,1.42002084971952,0.72353147925725,0.50925170356284,0.287696137450811,1.29708181420028,0.549122826376163,0,2.60498663367952,1.24815069245824,0.757736633841335,1.61457672169721,0.482443521363367,2.58654466233247,2.84237117655727,4.23708938749267,3.56464680127895,4.92849521405854,5.52770649557992,1.6663054862021,2.92700471786698,5.04432461139811,6.64394068946325,4.9430978283821,3.11340297959902,3.28101465545202,4.48412081602686,0,1.08781136763742,0,2.48343071674259,3.69266356971921,5.04010252346474,0.491804836130026,4.03953483526997,2.2085575359138,2.34263246577983,3.01592756825919,2.15071918157297,3.11918143715352,4.52922449262132,3.23848561339915,3.50707029493574,5.13874111330481,8.03303291054518,3.26462195979018,1.78065603667255,4.88660878060728,4.94910368917606,0,3.15614827001476,2.11626489875326,2.07465587731488,0.885905678642318,2.76691633149535,1.80899805217755,3.99887102425256,2.49548164869305,1.58018378967908,1.05418608574999,1.03135543248187,3.06395645178409,4.14140516272013,2.19909762430683,2.7863814554107,5.49754724291048,3.56737635204141,5.10101963866575,2.13125464380219,1.40803024838226,1.0591603543191,0.441056796109924,2.30840754118072,7.26589920131575,2.71408162176701,1.55184047204077,1.80554989719567,2.33184669303881,2.59595422814714,0.854354403989263,1.23832120777933,0.370389054739423,1.31857919903284,1.50363650493128,0.457556346413045,4.07948231985253,3.77868921273877,3.73139929271944,0,5.53587988766987,6.70954241518601,3.78018692876304,5.64538399239065,4.58561383866973,3.10187996685088,4.95920734352016,2.6175594198403,3.49960427887841,1.24267862617385,1.12738587736838,4.18646328923141,2.64733584731356,2.33341426012857,2.71235629303235,1.68956125490778,4.92900402312167,1.0416350787516,1.46803082195995,0.241584120826006,0.864090018773596,6.95224465381992,1.01362607645082,2.36235201479103,2.46849563657811,3.40150721768215,5.36439657909415,5.04820887983869,4.72606486958647,6.76475214652589,6.93481940560499,7.9652686258104,7.60171469770069,5.96513418170043,12.5058285334279,3.17422537061296,0,0.179427713218951,0.503653849092235,3.09103350451505,2.064507229963,4.2124873581471,3.42989406526505,1.50471631210609,5.0827665835536,5.06357760157895,5.15605962095457,8.59265911718438,9.59115527678899,4.5323633843382,10.8003600037089,5.40385443869065,8.15656336171568,4.14208249401456,2.38710899443606,6.3843979744165,5.9756762013947,4.61902762429759,2.51535795153579,2.20612210140017,3.33370091702423,5.15087643097235,5.77654577265267,4.54854981174835,3.54871019846336,4.52703219326583,5.3375659257833,3.9695594491019,4.53740204749345,4.28664322154766,3.70829843023538,2.12200142510076,5.76920261124629,5.2991611248383,4.80016953339582,4.2594193478241,4.29185141905178,3.48831399917588,4.89368778159719,3.63842813934209,4.39027134894654,4.73525480588117,5.70377278152619,3.92799590160417,4.50813068871862,5.31924204828043,2.86461730218783,3.71848418846318,5.78719832943424,3.2475375131933,2.8071793013449,3.65280791882107,4.01705497344571,3.97064554415128,3.70988536992674
|phase1_expression=3.68342348341026,0,0,1.20985684522732,0.500895729946347,0,0,0.258246646883153,0.140788722151667,0,0.171217968225505,0,0.171200729931206,0,0,1.21485160433896,0.699561878128147,1.41957974411207,0.959801035240171,0.84877930359606,2.21112554392781,0.595745707205312,0.261199789138935,0.799962113967033,0.45881856213434,0,0,0,0.190023419456374,1.00812051903972,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.166234645358492,0.408338712524738,0.418531630736908,0,0,0.588231488031014,0,0,1.38486499773135,0.912392380975631,0.917733760808408,0,0.218025156380447,1.31811709640683,0.194429899074283,0.55994568650145,0,1.34226084846189,0.725362142011344,0,0.257259436035947,0.573066879877513,0.515672092277442,2.42779753031517,0,2.53532561402472,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0,1.15265491596466,9.02099627083756,6.34527910158946,7.36137364729837,0.571301968807607,3.75476519617743,4.16468717330844,3.06705507258356,4.5960939330501,0,1.53224805702225,1.99688493233117,2.1101806036831,1.00636407962651,3.64639359389732,1.95428099300967,0.56276261003168,3.0559649555362,2.06240009831567,3.98640706237488,4.10078780815661,0.227178579999552,0.453429360640713,4.34796733052517,1.72084775396277,0,0.539703191637817,0.649776417447669,1.79210754838934,0.702222100658759,0.340860645156116,0.779358013808606,0,2.81686839553361,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.68510327831436,0.776813650941515,2.67195850316685,2.4287945747259,1.21786191324856,1.84492397804847,1.20578112442098,3.29248379979973,0.879666139307728,0.494389935468748,2.4581890676385,0,5.17653919831709,2.42925670306433,3.87900202508178,5.59175283654366,30.7419836862124,34.3492599174066,0.766371165625774,1.7972268675888,0.599902730993408,1.14363204365758,2.24685959107234,1.83000241127451,3.76963056338593,9.73416193076748,12.2743419518559,4.77912502486988,4.70499662896497,3.66621709861139,2.98576729464223,1.76905930903572,2.10441855886474,4.16385417480652,3.21862946206862,3.96136685571768,5.12396380641431,8.02830689985669,6.02134485338794,6.27801554550183,3.3631438196072,7.76044774558232,13.4265316919152,17.067259043903,6.79506770525482,9.17555922444473,5.57203466435466,4.11564272815887,4.37875387000685,0,1.28673953557358,1.42081749697796,2.27838349789052,1.87620847984877,1.80062061461015,4.26140524053378,4.13204886669548,2.77680803197281,3.0229412817553,0.804820204198858,5.3712057488898,3.29119699826961,2.95501435342371,3.4859588104718,2.04679982395465,2.63460138349261,2.95254121272818,14.2997165023607,9.15851050175631,1.65209391491899,1.05780226665418,4.90562976231038,5.57368012465052,5.15469845288373,3.63030344322017,1.33426826306922,2.09248188723815,1.89811624617805,1.4822905925161,3.2673577144035,2.58643413653496,3.8992817423824,2.69645822596266,1.72910439899755,1.1948476395262,1.89667900953082,2.97046132785295,2.25415471346161,5.09128319613286,4.26695471768777,5.6810014111158,5.88099795255593,3.69025369949005,2.19798218977925,2.59134044235781,1.1858105083486,1.16791574001266,1.57247196090562,0.224862112384854,1.42002084971952,0.72353147925725,0.50925170356284,0.287696137450811,1.29708181420028,0.549122826376163,0,2.60498663367952,1.24815069245824,0.757736633841335,1.61457672169721,0.482443521363367,2.58654466233247,2.84237117655727,4.23708938749267,3.56464680127895,4.92849521405854,5.52770649557992,1.6663054862021,2.92700471786698,5.04432461139811,6.64394068946325,4.9430978283821,3.11340297959902,3.28101465545202,4.48412081602686,0,1.08781136763742,0,2.48343071674259,3.69266356971921,5.04010252346474,0.491804836130026,4.03953483526997,2.2085575359138,2.34263246577983,3.01592756825919,2.15071918157297,3.11918143715352,4.52922449262132,3.23848561339915,3.50707029493574,5.13874111330481,8.03303291054518,3.26462195979018,1.78065603667255,4.88660878060728,4.94910368917606,0,3.15614827001476,2.11626489875326,2.07465587731488,0.885905678642318,2.76691633149535,1.80899805217755,3.99887102425256,2.49548164869305,1.58018378967908,1.05418608574999,1.03135543248187,3.06395645178409,4.14140516272013,2.19909762430683,2.7863814554107,5.49754724291048,3.56737635204141,5.10101963866575,2.13125464380219,1.40803024838226,1.0591603543191,0.441056796109924,2.30840754118072,7.26589920131575,2.71408162176701,1.55184047204077,1.80554989719567,2.33184669303881,2.59595422814714,0.854354403989263,1.23832120777933,0.370389054739423,1.31857919903284,1.50363650493128,0.457556346413045,4.07948231985253,3.77868921273877,3.73139929271944,0,5.53587988766987,6.70954241518601,3.78018692876304,5.64538399239065,4.58561383866973,3.10187996685088,4.95920734352016,2.6175594198403,3.49960427887841,1.24267862617385,1.12738587736838,4.18646328923141,2.64733584731356,2.33341426012857,2.71235629303235,1.68956125490778,4.92900402312167,1.0416350787516,1.46803082195995,0.241584120826006,0.864090018773596,6.95224465381992,1.01362607645082,2.36235201479103,2.46849563657811,3.40150721768215,5.36439657909415,5.04820887983869,4.72606486958647,6.7647521465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|short_description=p5@Tcf4
}}
}}

Latest revision as of 16:36, 1 October 2015

Short description:p5@Tcf4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Tcf4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000128706, NM_013685, uc008fnp.1, uc008fnq.1, uc012ben.1_5end
EntrezGene:Tcf4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Tcf4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.02
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B230.74
cerebellum, neonate N30.CNhs11135.1395-42I234.35
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D59.73
cortex, neonate N30.CNhs11107.1392-42F212.27
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C64.16
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D45.12
eyeball, neonate N00.CNhs11207.633-15C68.03
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G86.28
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E27.76
forelimb, embryo E12.CNhs10600.359-14H213.43
forelimb, embryo E13.CNhs10589.384-1E217.07
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E79.18
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E35.37
heart, neonate N03.CNhs11221.1349-25I23.29
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G13.49
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E814.30
hippocampus, neonate N00.CNhs11228.627-43G19.16
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D85.15
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F82.97
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G75.68
kidney, neonate N10.CNhs11206.758-6D55.88
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H12.59
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C53.56
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E55.04
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E64.94
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H24.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A35.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I44.89
oviduct, adult pregnant day01.CNhs10500.988-6G64.95
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G47.27
skin, neonate N03.CNhs11215.662-22H32.71
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.73
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E35.54
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D43.78
stomach, embryo E17.CNhs11006.1035-18D55.65
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A94.96
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I13.50
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B56.95
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F85.05
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C46.76
thymus, neonate N07.CNhs11211.713-19D36.93
thymus, neonate N10.CNhs11194.748-24E47.97
thymus, neonate N20.CNhs11186.820-7A27.60
thymus, neonate N25.CNhs11125.1362-25G75.97
thymus, neonate N30.CNhs11132.1393-42G212.51
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H25.98
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate1.62e-0849
neurectoderm2.67e-0864
neural plate2.67e-0864
presumptive neural plate2.67e-0864
cerebral cortex7.55e-0821
cerebral hemisphere7.55e-0821
pallium7.55e-0821
ecto-epithelium8.91e-0873
brain2.07e-0747
future brain2.07e-0747
regional part of brain5.97e-0746
regional part of forebrain8.69e-0739
forebrain8.69e-0739
future forebrain8.69e-0739
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