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FFCP PHASE1:Mm9::chr6:71657883..71657901,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:71657883..71657901,+
|DHSsupport=NA
|short_description=p2@Reep1
|DPIdataset=NA
|description=CAGE_peak_2_at_Reep1_5end
|association_with_transcript=29bp_to_uc009chc.1_5end
|EntrezGene=52250
|EntrezGene=52250
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q8BGH4
|UniProt=Q8BGH4
|association_with_transcript=29bp_to_uc009chc.1_5end
|cluster_id=chr6:71657883..71657901,+
|description=CAGE_peak_2_at_Reep1_5end
|id=chr6:71657883..71657901,+
|ontology_enrichment_celltype=CL:0000117!4.88e-15!23;CL:0000337!4.88e-15!23;CL:0000540!3.74e-13!33;CL:0000047!3.74e-13!33;CL:0000031!3.74e-13!33;CL:0000404!3.74e-13!33;CL:0000221!4.46e-11!44;CL:0000133!4.46e-11!44;CL:0002319!4.76e-11!43;CL:0000393!2.44e-08!39;CL:0000211!2.44e-08!39;CL:0000055!8.51e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-16,23;CL:0000337,1.02e-16,23;CL:0000540,3.33e-13,33;CL:0000047,3.33e-13,33;CL:0000031,3.33e-13,33;CL:0000404,3.33e-13,33;CL:0000221,1.32e-10,44;CL:0000133,1.32e-10,44;CL:0002319,1.46e-10,43;CL:0000393,5.18e-09,39;CL:0000211,5.18e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.90e-22!75;UBERON:0001016!4.90e-22!75;UBERON:0001017!9.19e-22!73;UBERON:0005743!9.19e-22!73;UBERON:0004121!3.80e-19!102;UBERON:0000924!3.80e-19!102;UBERON:0006601!3.80e-19!102;UBERON:0002346!1.92e-18!71;UBERON:0003075!1.92e-18!71;UBERON:0007284!1.92e-18!71;UBERON:0001049!4.21e-18!52;UBERON:0005068!4.21e-18!52;UBERON:0006241!4.21e-18!52;UBERON:0007135!4.21e-18!52;UBERON:0002020!4.25e-18!34;UBERON:0000033!8.12e-17!63;UBERON:0000955!2.38e-16!50;UBERON:0006238!2.38e-16!50;UBERON:0002616!6.04e-16!49;UBERON:0002791!1.04e-14!29;UBERON:0003528!1.04e-14!29;UBERON:0001893!1.04e-14!29;UBERON:0003056!1.18e-14!49;UBERON:0003080!1.01e-13!40;UBERON:0002780!3.08e-13!39;UBERON:0001890!3.08e-13!39;UBERON:0006240!3.08e-13!39;UBERON:0000956!4.42e-10!21;UBERON:0001869!4.42e-10!21;UBERON:0000203!4.42e-10!21;UBERON:0002619!5.05e-08!17;UBERON:0000468!5.70e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.15e-22,75;UBERON:0001017,2.38e-22,73;UBERON:0002346,1.90e-21,64;UBERON:0003075,1.90e-21,64;UBERON:0007284,1.90e-21,64;UBERON:0000073,4.72e-21,54;UBERON:0001049,8.98e-20,52;UBERON:0005068,8.98e-20,52;UBERON:0006241,8.98e-20,52;UBERON:0007135,8.98e-20,52;UBERON:0004121,1.81e-19,95;UBERON:0000924,1.81e-19,95;UBERON:0006601,1.81e-19,95;UBERON:0002020,2.89e-19,34;UBERON:0010371,1.14e-16,73;UBERON:0000955,7.19e-16,47;UBERON:0006238,7.19e-16,47;UBERON:0003056,1.19e-15,49;UBERON:0003528,1.71e-15,29;UBERON:0002791,1.71e-15,29;UBERON:0001893,1.71e-15,29;UBERON:0002616,1.99e-15,46;UBERON:0003080,1.43e-14,40;UBERON:0002780,4.94e-14,39;UBERON:0001890,4.94e-14,39;UBERON:0006240,4.94e-14,39;UBERON:0010314,4.01e-13,92;UBERON:0000956,2.42e-10,21;UBERON:0001869,2.42e-10,21;UBERON:0000203,2.42e-10,21;UBERON:0002619,4.63e-08,17;UBERON:0002021,2.55e-07,10;UBERON:0000411,2.55e-07,10;UBERON:0001950,2.55e-07,10
|phase1_expression=0.80074423552397,2.44282785347553,4.09499315450582,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0.261199789138935,11.0394771727451,14.2233754261645,2.29692785646008,1.7230479846363,0.861884930743556,0.190023419456374,0,1.10865255327652,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,1.09012578190223,0.878744730937887,0.58328969722285,0.55994568650145,2.87505128729943,0,0,0,0,0.286533439938757,0,19.8270131642406,30.6814767977779,20.9164363157039,1.0165335962074,0,0,0,0,1.79760066311043,1.92109152660777,12.1316846400919,13.9056116481641,12.6194976810829,16.8534080798244,17.4486147351775,11.7591167246356,11.6931474642248,13.7882817991503,12.1127469099328,18.5146640223522,14.7462271925994,23.8714180791651,30.5568729632048,19.7947080811569,13.959149950069,9.00420176050688,9.0150966188318,20.6240009831567,19.2201769078789,28.3327157654457,1.51452386666368,3.85414956544606,3.47837386442013,0,0,0,0,0,1.68533304158102,0,0,0,1.83096445709685,0,0,0,0.216491041011214,0,0,1.1418387971906,3.10725460376606,0.445326417194474,0.346970653532272,2.13125834818499,1.84492397804847,1.65794904607885,2.93971767839262,0.502666365318702,0.494389935468748,0.433798070759735,0.884610551949874,5.01477234836968,3.5334642953663,1.45462575940567,1.86391761218122,4.09893115816166,3.56059401582874,0.255457055208591,0,0,0,11.0845073159569,11.8950156732843,18.2198810563653,11.1247564923057,9.97290283588289,13.5062228963714,12.1680947300818,1.83310854930569,1.49288364732112,0.252722758433675,1.26265113531884,1.04096354370163,1.83921683546778,3.78130472591233,3.31550599238573,3.40182495756639,3.07472928683639,2.90475346135159,4.65666067330228,0.215567992932842,0.567318240503458,0.175951124163949,1.53437012699302,0.834141747676794,0.348252166522167,0.411564272815887,2.7864797354589,0,0,0,1.24275463521301,0.469052119962192,0.36012412292203,0.710234206755631,1.37734962223183,1.3884040159864,0.930135779001631,0.804820204198858,1.28441876603886,1.15191894939436,1.31333971263276,0.891756905004413,1.31579988682799,0.658650345873152,0.134206418760372,8.83217783969334,18.6257348406505,0,0,0.639864751605702,0.928946687441754,1.15980715189884,1.61346819698674,0.889512175379481,0.951128130562796,0.949058123089023,0.988193728344065,0.251335208800269,0.198956472041151,1.55971269695296,1.79763881730844,0,0,0.569003702859245,0.685491075658373,1.1270773567308,0.407302655690628,0.969762435838129,0.631222379012867,0.885311519739602,0,0,0.123397163921801,0,0.83422552858047,0.589676985339609,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,0.575392274901621,0.648540907100142,1.37280706594041,0,0.744281895337007,0.624075346229121,1.51547326768267,0.358794827043824,0,2.03228509183265,0.947457058852424,0.488894929326078,0.509235257325564,1.17345124144251,1.34005005953453,1.6663054862021,2.34160377429359,1.7339865851681,1.55025282754142,2.23236676120482,1.96635977658886,1.38147985492716,2.4590339958857,0,0,0,0,15.7339578188036,16.0580010631318,0,7.82659874333556,2.83957397474631,2.34263246577983,2.36965737506079,0.955875191810208,1.11399337041197,0.849229592366497,1.21443210502468,3.79932615284705,2.37172666767914,5.14114106274891,1.13552068166615,3.20518086601059,3.90928702448583,1.97964147567043,0,0.485561272309963,0.604647113929502,0.943025398779491,0,0.614870295887855,1.29214146584111,0,0,0.316036757935816,0,1.03135543248187,0,0.540183282093931,1.4229455216103,2.14337035031592,1.95074257006501,1.07021290561242,1.48094118541909,1.2178597964584,1.87737366450968,0.847328283455281,1.10264199027481,0.16488625294148,1.29171541356724,0.844380948994182,0.716234064018819,0.656563598980245,0.582961673259701,20.025932617135,0.170870880797853,0,0.185194527369712,0.753473828018764,0.136694227721025,0,0,0,0,0.954670618015114,0.632671987162271,0.813277868507395,0.648032044930808,0.627264888043406,1.31017538247707,1.21377911746339,1.40510874733071,0.785267825952089,0.388844919875379,0.621339313086926,5.07323644815771,2.54178128274764,1.65458490457098,4.4723773319131,3.35815541042101,3.8859908862879,5.51579021635044,8.98410255423256,11.953965264531,10.6297013163443,10.0810502190253,0.316011120628178,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0.79472541912506,0.360586348559907,0.443068581523732,0.201932899896295,0.15241361331,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,2.0405734525369,0.443971906748129,0,0.167884616364078,1.9318959403219,1.50145980360946,0.73260649706906,0.214368379079066,1.00314420807073,15.2482997506608,18.4130094602871,18.3326564300607,14.9512268639008,14.3867329151835,7.55393897389701,12.1504050041725,11.7083512838297,10.4222754066367,10.8729665467882,0.415149390336707,3.59122386060928,2.73173769206615,4.132814190161,2.30574478890781,1.65459157605013,4.4449345560323,3.91466608753899,4.1719497246936,4.54854981174835,2.78827229879264,6.97917463128482,3.65201879132541,4.1616349063165,5.6286759576501,4.28664322154766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|phase1_expression=0.80074423552397,2.44282785347553,4.09499315450582,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0.261199789138935,11.0394771727451,14.2233754261645,2.29692785646008,1.7230479846363,0.861884930743556,0.190023419456374,0,1.10865255327652,1.27006134691926,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,1.09012578190223,0.878744730937887,0.58328969722285,0.55994568650145,2.87505128729943,0,0,0,0,0.286533439938757,0,19.8270131642406,30.6814767977779,20.9164363157039,1.0165335962074,0,0,0,0,1.79760066311043,1.92109152660777,12.1316846400919,13.9056116481641,12.6194976810829,16.8534080798244,17.4486147351775,11.7591167246356,11.6931474642248,13.7882817991503,12.1127469099328,18.5146640223522,14.7462271925994,23.8714180791651,30.5568729632048,19.7947080811569,13.959149950069,9.00420176050688,9.0150966188318,20.6240009831567,19.2201769078789,28.3327157654457,1.51452386666368,3.85414956544606,3.47837386442013,0,0,0,0,0,1.68533304158102,0,0,0,1.83096445709685,0,0,0,0.216491041011214,0,0,1.1418387971906,3.10725460376606,0.445326417194474,0.346970653532272,2.13125834818499,1.84492397804847,1.65794904607885,2.93971767839262,0.502666365318702,0.494389935468748,0.433798070759735,0.884610551949874,5.01477234836968,3.5334642953663,1.45462575940567,1.86391761218122,4.09893115816166,3.56059401582874,0.255457055208591,0,0,0,11.0845073159569,11.8950156732843,18.2198810563653,11.1247564923057,9.97290283588289,13.5062228963714,12.1680947300818,1.83310854930569,1.49288364732112,0.252722758433675,1.26265113531884,1.04096354370163,1.83921683546778,3.78130472591233,3.31550599238573,3.40182495756639,3.07472928683639,2.90475346135159,4.65666067330228,0.215567992932842,0.567318240503458,0.175951124163949,1.53437012699302,0.834141747676794,0.348252166522167,0.411564272815887,2.7864797354589,0,0,0,1.24275463521301,0.469052119962192,0.36012412292203,0.710234206755631,1.37734962223183,1.3884040159864,0.930135779001631,0.804820204198858,1.28441876603886,1.15191894939436,1.31333971263276,0.891756905004413,1.31579988682799,0.658650345873152,0.134206418760372,8.83217783969334,18.6257348406505,0,0,0.639864751605702,0.928946687441754,1.15980715189884,1.61346819698674,0.889512175379481,0.951128130562796,0.949058123089023,0.988193728344065,0.251335208800269,0.198956472041151,1.55971269695296,1.79763881730844,0,0,0.569003702859245,0.685491075658373,1.1270773567308,0.407302655690628,0.969762435838129,0.631222379012867,0.885311519739602,0,0,0.123397163921801,0,0.83422552858047,0.589676985339609,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,0.575392274901621,0.648540907100142,1.37280706594041,0,0.744281895337007,0.624075346229121,1.51547326768267,0.358794827043824,0,2.03228509183265,0.947457058852424,0.488894929326078,0.509235257325564,1.17345124144251,1.34005005953453,1.6663054862021,2.34160377429359,1.7339865851681,1.55025282754142,2.23236676120482,1.96635977658886,1.38147985492716,2.4590339958857,0,0,0,0,15.7339578188036,16.0580010631318,0,7.82659874333556,2.83957397474631,2.34263246577983,2.36965737506079,0.955875191810208,1.11399337041197,0.849229592366497,1.21443210502468,3.79932615284705,2.37172666767914,5.14114106274891,1.13552068166615,3.20518086601059,3.90928702448583,1.97964147567043,0,0.485561272309963,0.604647113929502,0.943025398779491,0,0.614870295887855,1.29214146584111,0,0,0.316036757935816,0,1.03135543248187,0,0.540183282093931,1.4229455216103,2.14337035031592,1.95074257006501,1.07021290561242,1.48094118541909,1.2178597964584,1.87737366450968,0.847328283455281,1.10264199027481,0.16488625294148,1.29171541356724,0.844380948994182,0.716234064018819,0.656563598980245,0.582961673259701,20.025932617135,0.170870880797853,0,0.185194527369712,0.753473828018764,0.136694227721025,0,0,0,0,0.954670618015114,0.632671987162271,0.813277868507395,0.648032044930808,0.627264888043406,1.31017538247707,1.21377911746339,1.40510874733071,0.785267825952089,0.388844919875379,0.621339313086926,5.07323644815771,2.54178128274764,1.65458490457098,4.4723773319131,3.35815541042101,3.8859908862879,5.51579021635044,8.98410255423256,11.953965264531,10.6297013163443,10.0810502190253,0.316011120628178,0.405450430580328,0.205421914329655,0.129920822977795,0.179026695667481,0.79472541912506,0.360586348559907,0.443068581523732,0.201932899896295,0.15241361331,0.302478555410522,0.194915761479505,0.0962118416403295,0.116876902181569,2.0405734525369,0.443971906748129,0,0.167884616364078,1.9318959403219,1.50145980360946,0.73260649706906,0.214368379079066,1.00314420807073,15.2482997506608,18.4130094602871,18.3326564300607,14.9512268639008,14.3867329151835,7.55393897389701,12.1504050041725,11.7083512838297,10.4222754066367,10.8729665467882,0.415149390336707,3.59122386060928,2.73173769206615,4.132814190161,2.30574478890781,1.65459157605013,4.4449345560323,3.91466608753899,4.1719497246936,4.54854981174835,2.78827229879264,6.97917463128482,3.65201879132541,4.1616349063165,5.6286759576501,4.28664322154766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|short_description=p2@Reep1
}}
}}

Latest revision as of 16:56, 1 October 2015

Short description:p2@Reep1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Reep1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 29bp_to_uc009chc.1_5end
EntrezGene:Reep1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Reep1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.22
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C319.83
Mouse Granule cells, donor2.CNhs12357.11731-123E330.68
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.13
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.45
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.69
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.87
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F430.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.79
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.33
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F93.85
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C12.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F55.01
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.08
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F118.22
cortex, adult.CNhs10473.12-14D511.12
cortex, neonate N30.CNhs11107.1392-42F29.97
diencephalon, adult.CNhs10482.20-12F213.51
diencephalon, neonate N30.CNhs11201.1388-42B212.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E88.83
hippocampus, neonate N00.CNhs11228.627-43G118.63
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C215.73
medulla oblongata, neonate N30.CNhs11200.1396-42A316.06
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C920.03
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I53.36
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B75.52
testis, neonate N07.CNhs11222.726-26I48.98
testis, neonate N10.CNhs11204.763-44D911.95
testis, neonate N20.CNhs11110.839-18H310.63
testis, neonate N30.CNhs11130.1391-42E210.08
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.64
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.02e-1623
neuroblast (sensu Vertebrata)1.02e-1623
neuron3.33e-1333
neuronal stem cell3.33e-1333
neuroblast3.33e-1333
electrically signaling cell3.33e-1333
ectodermal cell1.32e-1044
neurectodermal cell1.32e-1044
neural cell1.46e-1043
electrically responsive cell5.18e-0939
electrically active cell5.18e-0939

Uber anatomy
Ontology termp-valuen
nervous system1.15e-2275
central nervous system2.38e-2273
neurectoderm1.90e-2164
neural plate1.90e-2164
presumptive neural plate1.90e-2164
regional part of nervous system4.72e-2154
neural tube8.98e-2052
neural rod8.98e-2052
future spinal cord8.98e-2052
neural keel8.98e-2052
ectoderm-derived structure1.81e-1995
ectoderm1.81e-1995
presumptive ectoderm1.81e-1995
gray matter2.89e-1934
ecto-epithelium1.14e-1673
brain7.19e-1647
future brain7.19e-1647
pre-chordal neural plate1.19e-1549
brain grey matter1.71e-1529
regional part of telencephalon1.71e-1529
telencephalon1.71e-1529
regional part of brain1.99e-1546
anterior neural tube1.43e-1440
regional part of forebrain4.94e-1439
forebrain4.94e-1439
future forebrain4.94e-1439
structure with developmental contribution from neural crest4.01e-1392
cerebral cortex2.42e-1021
cerebral hemisphere2.42e-1021
pallium2.42e-1021
regional part of cerebral cortex4.63e-0817
occipital lobe2.55e-0710
visual cortex2.55e-0710
neocortex2.55e-0710
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