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FFCP PHASE1:Mm9::chr5:117565891..117565915,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:117565891..117565915,-
|DHSsupport=NA
|short_description=p3@Suds3
|DPIdataset=NA
|description=CAGE_peak_3_at_Suds3_5end
|association_with_transcript=86bp_to_ENSMUST00000086471,ENSMUST00000166397,NM_001122666,NM_178622,uc008zff.2,uc008zfg.2_5end
|EntrezGene=71954
|EntrezGene=71954
|HGNC=
|HGNC=
|MCL_coexpression_id=207
|TSSclassifier=NA
|UniProt=Q8BR65
|UniProt=Q8BR65
|association_with_transcript=86bp_to_ENSMUST00000086471,ENSMUST00000166397,NM_001122666,NM_178622,uc008zff.2,uc008zfg.2_5end
|cluster_id=chr5:117565891..117565915,-
|description=CAGE_peak_3_at_Suds3_5end
|id=chr5:117565891..117565915,-
|ontology_enrichment_celltype=CL:0000066!3.20e-11!25;CL:0002321!6.75e-09!70;CL:0000220!6.75e-09!70;CL:0000223!1.73e-08!20;CL:0000548!4.56e-07!115;CL:0000004!4.56e-07!115;CL:0000255!4.56e-07!115;CL:0002371!8.62e-07!118
|ontology_enrichment_celltype_v019_2=CL:0000066,3.20e-11,25;CL:0002321,6.75e-09,70;CL:0000223,1.73e-08,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!7.70e-09!15;UBERON:0001242!1.02e-07!13;UBERON:0000060!1.02e-07!13;UBERON:0001262!1.02e-07!13;UBERON:0004786!1.02e-07!13;UBERON:0000485!5.64e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.70e-09,15;UBERON:0001242,1.02e-07,13;UBERON:0001262,1.02e-07,13;UBERON:0004786,1.02e-07,13;UBERON:0000485,5.64e-07,11
|phase1_expression=10.7299727560212,38.0383194326904,43.2249277420059,25.1045295384669,29.5528480668345,18.1309613664841,8.41005506143892,2.7115897922731,14.6420271037733,12.8735489477096,4.28044920563762,2.31339261086476,2.39681021903688,2.27293046289393,1.66554880907831,1.82227740650843,2.79824751251259,1.73504190947031,2.4680598049033,1.27316895539409,8.67441559540912,2.58156473122302,3.91799683708403,11.3594620183319,12.6175104586944,24.6919744569459,21.9688618041128,19.1769397090441,8.93110071444957,9.8291750606373,7.76056787293567,6.35030673459631,4.30545351309199,0,9.24325183204079,6.31691652362271,8.37094360675713,4.60384793810598,2.3440060335714,2.61761871986899,4.1176204162171,8.19654581950135,6.311634589405,3.02152363141385,3.75094645512204,4.22157529971868,7.82391344348039,9.15705656797875,10.7646229539891,10.4992145500113,6.43937539476668,5.75010257459886,3.18786951509699,6.5282592781021,3.36093799142464,2.82985379639542,3.43840127926508,5.15672092277442,5.46254444320914,6.87688273053643,4.43681982454325,10.8430250262122,5.33576877666684,8.54904731417329,10.8775299882367,11.3676818391376,8.98800331555214,19.5951335713993,4.25127410464758,3.51015439662396,2.3135745748652,5.42736870367227,7.50953039235486,3.91970557487853,5.46319184803947,4.5960939330501,6.60695285996332,9.3211756802187,7.0659005297872,4.61602007055678,6.49562269577109,3.12548022334056,8.93385596804419,4.50210088025344,5.65353516774197,3.53554302568401,5.26775218956681,5.96478226640962,1.8931548333296,2.49386148352392,4.05810284182349,12.9063581547208,19.7191686775248,32.382191498269,18.8435161059824,20.6092368064774,10.5333315098814,1.53387290320252,2.59786004602869,2.12003744706204,6.90132756905734,6.41632387071589,2.54805239706646,7.11066703153331,4.76280290224671,4.56047757855178,6.57181778519218,17.6985013564543,1.8125651855302,2.82040064223167,5.03107447621794,4.56698217468212,3.45923245884088,5.12456977878917,5.17390311397101,5.6549966098354,2.47194967734374,4.04878199375753,2.65383165584962,1.94120219936891,4.41683036920787,0.969750506270444,9.31958806090611,2.63502717310392,7.33063473847093,3.83185582812887,3.47463861067169,4.79922184794726,2.41433431438823,2.99581278809645,3.20250421973039,3.14135880282161,3.99795936442236,5.37002460393694,4.57133698031032,4.70499662896497,1.93494791315601,3.23458123586242,3.0326731012041,6.10281382070775,1.95180664444056,3.67843367093557,2.16074555766419,2.56198190320716,2.72145996605311,3.33095672740609,4.12287588062807,4.13925393182425,4.31135985865684,2.83659120251729,1.75951124163949,1.53437012699302,1.11218899690239,1.74126083261083,3.2925141825271,4.17971960318836,3.51106593656617,3.08817488537658,4.26245249093389,2.69263504296152,0.469052119962192,1.98068267607116,0.473489471170421,2.36117078096885,1.3884040159864,1.86027155800326,0.536546802799238,1.98501082024188,1.97471819896177,2.62667942526552,2.51313309592153,1.60819986167866,2.41505126820156,3.08674763148855,4.20579897128254,1.85228302282712,6.93879444265976,6.34681359992506,1.06644125267617,3.94802342162745,2.19074684247559,1.61346819698674,4.22518283305254,1.52180500890047,4.2707615539006,4.77626968699632,3.51869292320377,4.37704238490532,4.09424582950152,3.59527763461689,6.48414149624083,8.16479220342906,1.51734320762465,2.28497025219458,3.38123207019241,2.64746726198909,3.49114476901726,3.43665517462561,3.54124607895841,9.59465961867414,10.047918581848,11.5993334086492,23.1233049127976,1.83529616287703,1.37591296579242,1.79889689907883,2.63718157805054,3.13530307678142,3.05551022137704,3.74004978686054,6.64754429777645,7.68771956926628,10.0637744569148,10.0478055870496,6.86482880852033,10.3557339958316,9.68746033018326,17.3679667690812,2.40179147216586,2.4633883530163,1.46668478797823,3.22515662972857,3.05097322775053,1.84256883185997,3.33261097240419,7.21994497073856,1.26108115284953,1.7717175171902,3.82691444777969,2.29408640602033,4.14443956478149,4.77341893318988,3.01582567878545,9.24639662491806,0.491764273019036,1.65562047782839,4.65596710964597,4.21962071731931,2.78689407140348,3.7870639080656,1.89304931649754,2.34263246577983,2.80050417052639,2.15071918157297,2.00518806674155,2.26461224631066,3.64329631507405,1.75353514746787,1.97643888973262,6.74774764485795,2.83880170416537,1.95872164033981,2.28041743095006,2.3095817216155,2.65490276679926,4.85561272309963,3.93020624054176,3.20628635585027,3.54362271456927,0.922305443831782,3.10113951801865,2.18120237686503,4.9909632973861,1.58018378967908,3.16255825724996,4.12542172992747,5.10659408630682,3.24109969256358,2.71653235943784,2.7863814554107,7.09360934569094,5.52943334566419,4.27827453565514,6.69822888052118,2.11204537257339,1.69465656691056,5.29268155331909,5.7710188529518,4.84393280087717,2.65376869683886,2.86493625607528,2.46211349617592,4.37221254944776,2.96680483216816,2.22132145037209,3.09580301944834,1.85194527369712,1.88368457004691,3.96413260390973,2.0590035588587,4.07948231985253,2.23922323717853,3.59319931891502,1.90934123603023,3.16335993581135,1.82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|phase1_expression=10.7299727560212,38.0383194326904,43.2249277420059,25.1045295384669,29.5528480668345,18.1309613664841,8.41005506143892,2.7115897922731,14.6420271037733,12.8735489477096,4.28044920563762,2.31339261086476,2.39681021903688,2.27293046289393,1.66554880907831,1.82227740650843,2.79824751251259,1.73504190947031,2.4680598049033,1.27316895539409,8.67441559540912,2.58156473122302,3.91799683708403,11.3594620183319,12.6175104586944,24.6919744569459,21.9688618041128,19.1769397090441,8.93110071444957,9.8291750606373,7.76056787293567,6.35030673459631,4.30545351309199,0,9.24325183204079,6.31691652362271,8.37094360675713,4.60384793810598,2.3440060335714,2.61761871986899,4.1176204162171,8.19654581950135,6.311634589405,3.02152363141385,3.75094645512204,4.22157529971868,7.82391344348039,9.15705656797875,10.7646229539891,10.4992145500113,6.43937539476668,5.75010257459886,3.18786951509699,6.5282592781021,3.36093799142464,2.82985379639542,3.43840127926508,5.15672092277442,5.46254444320914,6.87688273053643,4.43681982454325,10.8430250262122,5.33576877666684,8.54904731417329,10.8775299882367,11.3676818391376,8.98800331555214,19.5951335713993,4.25127410464758,3.51015439662396,2.3135745748652,5.42736870367227,7.50953039235486,3.91970557487853,5.46319184803947,4.5960939330501,6.60695285996332,9.3211756802187,7.0659005297872,4.61602007055678,6.49562269577109,3.12548022334056,8.93385596804419,4.50210088025344,5.65353516774197,3.53554302568401,5.26775218956681,5.96478226640962,1.8931548333296,2.49386148352392,4.05810284182349,12.9063581547208,19.7191686775248,32.382191498269,18.8435161059824,20.6092368064774,10.5333315098814,1.53387290320252,2.59786004602869,2.12003744706204,6.90132756905734,6.41632387071589,2.54805239706646,7.11066703153331,4.76280290224671,4.56047757855178,6.57181778519218,17.6985013564543,1.8125651855302,2.82040064223167,5.03107447621794,4.56698217468212,3.45923245884088,5.12456977878917,5.17390311397101,5.6549966098354,2.47194967734374,4.04878199375753,2.65383165584962,1.94120219936891,4.41683036920787,0.969750506270444,9.31958806090611,2.63502717310392,7.33063473847093,3.83185582812887,3.47463861067169,4.79922184794726,2.41433431438823,2.99581278809645,3.20250421973039,3.14135880282161,3.99795936442236,5.37002460393694,4.57133698031032,4.70499662896497,1.93494791315601,3.23458123586242,3.0326731012041,6.10281382070775,1.95180664444056,3.67843367093557,2.16074555766419,2.56198190320716,2.72145996605311,3.33095672740609,4.12287588062807,4.13925393182425,4.31135985865684,2.83659120251729,1.75951124163949,1.53437012699302,1.11218899690239,1.74126083261083,3.2925141825271,4.17971960318836,3.51106593656617,3.08817488537658,4.26245249093389,2.69263504296152,0.469052119962192,1.98068267607116,0.473489471170421,2.36117078096885,1.3884040159864,1.86027155800326,0.536546802799238,1.98501082024188,1.97471819896177,2.62667942526552,2.51313309592153,1.60819986167866,2.41505126820156,3.08674763148855,4.20579897128254,1.85228302282712,6.93879444265976,6.34681359992506,1.06644125267617,3.94802342162745,2.19074684247559,1.61346819698674,4.22518283305254,1.52180500890047,4.2707615539006,4.77626968699632,3.51869292320377,4.37704238490532,4.09424582950152,3.59527763461689,6.48414149624083,8.16479220342906,1.51734320762465,2.28497025219458,3.38123207019241,2.64746726198909,3.49114476901726,3.43665517462561,3.54124607895841,9.59465961867414,10.047918581848,11.5993334086492,23.1233049127976,1.83529616287703,1.37591296579242,1.79889689907883,2.63718157805054,3.13530307678142,3.05551022137704,3.74004978686054,6.64754429777645,7.68771956926628,10.0637744569148,10.0478055870496,6.86482880852033,10.3557339958316,9.68746033018326,17.3679667690812,2.40179147216586,2.4633883530163,1.46668478797823,3.22515662972857,3.05097322775053,1.84256883185997,3.33261097240419,7.21994497073856,1.26108115284953,1.7717175171902,3.82691444777969,2.29408640602033,4.14443956478149,4.77341893318988,3.01582567878545,9.24639662491806,0.491764273019036,1.65562047782839,4.65596710964597,4.21962071731931,2.78689407140348,3.7870639080656,1.89304931649754,2.34263246577983,2.80050417052639,2.15071918157297,2.00518806674155,2.26461224631066,3.64329631507405,1.75353514746787,1.97643888973262,6.74774764485795,2.83880170416537,1.95872164033981,2.28041743095006,2.3095817216155,2.65490276679926,4.85561272309963,3.93020624054176,3.20628635585027,3.54362271456927,0.922305443831782,3.10113951801865,2.18120237686503,4.9909632973861,1.58018378967908,3.16255825724996,4.12542172992747,5.10659408630682,3.24109969256358,2.71653235943784,2.7863814554107,7.09360934569094,5.52943334566419,4.27827453565514,6.69822888052118,2.11204537257339,1.69465656691056,5.29268155331909,5.7710188529518,4.84393280087717,2.65376869683886,2.86493625607528,2.46211349617592,4.37221254944776,2.96680483216816,2.22132145037209,3.09580301944834,1.85194527369712,1.88368457004691,3.96413260390973,2.0590035588587,4.07948231985253,2.23922323717853,3.59319931891502,1.90934123603023,3.16335993581135,1.82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|short_description=p3@Suds3
}}
}}

Latest revision as of 18:05, 1 October 2015

Short description:p3@Suds3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Suds3_5end
Coexpression cluster:MCL_coexpression_mm9:207
Association with transcript: 86bp_to_ENSMUST00000086471, ENSMUST00000166397, NM_001122666, NM_178622, uc008zff.2, uc008zfg.2_5end
EntrezGene:Suds3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Suds3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I538.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I643.22
CD326+ enterocyte, pool1.CNhs13542.11848-124I325.10
CD326+ enterocyte, pool2.CNhs13197.11849-124I429.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.13
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.41
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.64
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F212.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.27
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.62
GP2+ M cell, pool1.CNhs13228.11845-124H924.69
GP2+ M cell, pool2.CNhs13231.11846-124I121.97
GP2+ M cell, pool3.CNhs13240.11847-124I219.18
Ileum epithelium, pool1.CNhs13199.10252-104B98.93
Ileum epithelium, pool2.CNhs13232.10253-104C19.83
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.75
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.16
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C88.99
Mouse Microglia, donor2.CNhs12634.11736-123E819.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C419.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C832.38
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.61
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.70
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F55.12
adrenal gland, neonate N00.CNhs11191.1311-23C15.17
adrenal gland, neonate N25.CNhs11223.1377-27I35.65
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H14.05
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.47
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G84.12
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E24.31
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G12.51
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E36.48
intestine, neonate N30.CNhs11131.1384-42G18.16
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G73.44
kidney, neonate N10.CNhs11206.758-6D53.54
kidney, neonate N20.CNhs11113.832-19I19.59
kidney, neonate N25.CNhs11122.1353-25F310.05
kidney, neonate N30.CNhs11203.1385-42H111.60
liver, adult pregnant day01.CNhs10466.508-5B223.12
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F46.65
liver, neonate N03.CNhs11123.1345-25G27.69
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A310.36
liver, neonate N25.CNhs11198.1368-26H19.69
liver, neonate N30.CNhs11106.1382-42D117.37
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C67.22
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E63.83
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.25
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B97.09
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C35.77
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H32.65
skin, neonate N06.CNhs11097.693-20I52.86
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H13.96
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.59
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A92.64
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I16.48
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G516.91
testis, embryo E13.CNhs11031.389-23F52.99
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G55.44
testis, embryo E17.CNhs11029.486-18I54.78
testis, embryo E18.CNhs11027.503-18G55.58
testis, neonate N00.CNhs11189.1300-22B75.87
testis, neonate N07.CNhs11222.726-26I45.47
testis, neonate N10.CNhs11204.763-44D95.98
testis, neonate N20.CNhs11110.839-18H38.46
testis, neonate N30.CNhs11130.1391-42E210.95
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G71.83
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I82.28
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell3.20e-1125
embryonic cell6.75e-0970
endodermal cell1.73e-0820

Uber anatomy
Ontology termp-valuen
mucosa7.70e-0915
intestinal mucosa1.02e-0713
wall of intestine1.02e-0713
gastrointestinal system mucosa1.02e-0713
simple columnar epithelium5.64e-0711
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