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FFCP PHASE1:Mm9::chr6:79968899..79968939,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:79968899..79968939,+
|DHSsupport=NA
|short_description=p2@Lrrtm4
|DPIdataset=NA
|description=CAGE_peak_2_at_Lrrtm4_5end
|association_with_transcript=0bp_to_ENSMUST00000126005,ENSMUST00000133918_5end
|EntrezGene=243499
|EntrezGene=243499
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q80XG9
|UniProt=Q80XG9
|association_with_transcript=0bp_to_ENSMUST00000126005,ENSMUST00000133918_5end
|cluster_id=chr6:79968899..79968939,+
|description=CAGE_peak_2_at_Lrrtm4_5end
|id=chr6:79968899..79968939,+
|ontology_enrichment_celltype=CL:0000540!1.29e-14!33;CL:0000047!1.29e-14!33;CL:0000031!1.29e-14!33;CL:0000404!1.29e-14!33;CL:0000117!7.45e-12!23;CL:0000337!7.45e-12!23;CL:0000221!8.44e-11!44;CL:0000133!8.44e-11!44;CL:0002319!2.89e-10!43;CL:0000393!3.75e-10!39;CL:0000211!3.75e-10!39;CL:0000055!6.16e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,9.86e-19,33;CL:0000047,9.86e-19,33;CL:0000031,9.86e-19,33;CL:0000404,9.86e-19,33;CL:0000117,3.39e-15,23;CL:0000337,3.39e-15,23;CL:0000393,1.93e-14,39;CL:0000211,1.93e-14,39;CL:0000221,4.86e-13,44;CL:0000133,4.86e-13,44;CL:0002319,2.81e-12,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.55e-30!102;UBERON:0000924!1.55e-30!102;UBERON:0006601!1.55e-30!102;UBERON:0000073!9.60e-30!75;UBERON:0001016!9.60e-30!75;UBERON:0001017!1.99e-29!73;UBERON:0005743!1.99e-29!73;UBERON:0002346!1.82e-27!71;UBERON:0003075!1.82e-27!71;UBERON:0007284!1.82e-27!71;UBERON:0000033!8.04e-24!63;UBERON:0001049!3.49e-23!52;UBERON:0005068!3.49e-23!52;UBERON:0006241!3.49e-23!52;UBERON:0007135!3.49e-23!52;UBERON:0000955!4.80e-22!50;UBERON:0006238!4.80e-22!50;UBERON:0002616!2.75e-21!49;UBERON:0003056!1.48e-20!49;UBERON:0003080!1.21e-18!40;UBERON:0002780!6.41e-18!39;UBERON:0001890!6.41e-18!39;UBERON:0006240!6.41e-18!39;UBERON:0002020!2.55e-17!34;UBERON:0002791!3.22e-14!29;UBERON:0003528!3.22e-14!29;UBERON:0001893!3.22e-14!29;UBERON:0000153!4.27e-12!94;UBERON:0007811!6.04e-12!86;UBERON:0000956!1.40e-09!21;UBERON:0001869!1.40e-09!21;UBERON:0000203!1.40e-09!21;UBERON:0002021!3.05e-09!10;UBERON:0000411!3.05e-09!10;UBERON:0001950!3.05e-09!10;UBERON:0002619!1.88e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.14e-40,73;UBERON:0001016,4.58e-39,75;UBERON:0000073,1.87e-34,54;UBERON:0002346,3.59e-33,64;UBERON:0003075,3.59e-33,64;UBERON:0007284,3.59e-33,64;UBERON:0004121,3.60e-33,95;UBERON:0000924,3.60e-33,95;UBERON:0006601,3.60e-33,95;UBERON:0001049,2.59e-32,52;UBERON:0005068,2.59e-32,52;UBERON:0006241,2.59e-32,52;UBERON:0007135,2.59e-32,52;UBERON:0010371,3.80e-30,73;UBERON:0000955,1.84e-27,47;UBERON:0006238,1.84e-27,47;UBERON:0002616,2.37e-26,46;UBERON:0003080,1.61e-24,40;UBERON:0002020,2.29e-24,34;UBERON:0002780,1.92e-23,39;UBERON:0001890,1.92e-23,39;UBERON:0006240,1.92e-23,39;UBERON:0003056,4.71e-23,49;UBERON:0010314,3.05e-21,92;UBERON:0003528,1.15e-19,29;UBERON:0002791,1.15e-19,29;UBERON:0001893,1.15e-19,29;UBERON:0002021,2.65e-13,10;UBERON:0000411,2.65e-13,10;UBERON:0001950,2.65e-13,10;UBERON:0000956,1.14e-12,21;UBERON:0001869,1.14e-12,21;UBERON:0000203,1.14e-12,21;UBERON:0002619,1.74e-09,17;UBERON:0002420,2.15e-08,8;UBERON:0007245,2.15e-08,8;UBERON:0010009,2.15e-08,8;UBERON:0010011,2.15e-08,8;UBERON:0000454,2.15e-08,8;UBERON:0003076,4.65e-08,12;UBERON:0003057,4.65e-08,12;UBERON:0000025,3.09e-07,114;UBERON:0004111,3.55e-07,122;UBERON:0002240,6.00e-07,6;UBERON:0005174,6.00e-07,6;UBERON:0001137,6.00e-07,6
|phase1_expression=11.2104192973356,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.63011399117477,4.23192783417626,3.80298842103708,0,0,0,0,0,0.299600110518405,0,2.17748185847803,2.97013064329719,4.20649922702764,3.99911378165325,6.18431914664518,0.979926393719632,0.766763768145891,0,16.5173821499083,13.4071704989447,13.3637683932932,2.63772575460388,4.94033275453012,2.08365348222704,6.42120897703176,15.1945904708554,12.9878510610289,14.142172102736,14.5219114415085,4.84638559145781,0.530083353332288,0.68014404096107,0,0,0,0,0,0,0.702222100658759,0,0,0,8.73229202615419,0,0,0,0,0,0,0.34255163915718,0,1.03909497345377,0.173485326766136,0.913396434936424,0.230615497256059,0.452167921657868,0.705532242814229,0.376999773989026,0,0,0,0.161766849947409,0,0,0,3.22058876712702,2.09446706813455,0,0,0,0,24.1162929441765,26.992535566299,4.77486538028885,30.9407289942252,32.2201476236216,20.1554403222773,21.9025705141473,0.305518091550949,0,0,0.420883711772948,0.260240885925407,1.60931473103431,0.360124259610698,1.50704817835715,1.36072998302656,0.640568601424249,0.937017245597288,5.17406741478031,0,0.378212160335639,0.351902248327898,0.43839146485515,0.834141747676794,0.696504333044333,0.823128545631774,0.59710280045548,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0,0,0,0,0,0,0,0,0,0,31.1229123874908,4.52780294468852,0,0,1.49301775374664,0.232236671860439,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0.318909537314974,0,0,0,0,0,0,0,16.6972613587304,13.0104972117346,0,0,2.2085575359138,1.56175497718655,2.36965737506079,0,0.891194696329576,1.13230612315533,2.02405350837447,3.50707029493574,1.58115111178609,28.9189184779626,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0.720244376125241,1.29358683782755,1.71469628025274,2.12808280370728,2.31879462882692,1.64549020602121,0.304464949114599,0,0,0,0.98931751764888,0.161464426695906,0.241251699712623,0.238744688006273,0.328281799490123,0,15.0194494628513,0,0.619160603889667,0,0,0,0,0.169978429993855,0,0,0,0.949007980743406,0.406638934253697,0.108005340821801,1.04544148007234,0.436725127492355,0.539457385539283,0.495920734352016,0,0,0,0,0,0,0.194451188344048,0.645799117388655,0.168956125490778,0.58678619322877,0,0,0,0,0,0.202725215290164,0.410843828659309,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.4284471600261,52.016751725311,62.4456109648942,46.228506050452,52.7513540223395,47.5898155355511,44.5514850152992,53.137901980458,46.2205257163889,46.5984280576638,0.415149390336707,1.99512436700516,1.53660245178721,0.972426868273176,0.419226325255965,0.551530525350042,1.77797382241292,0.618105171716683,1.92551525755089,1.01078884705519,1.77435509923168,1.13175804831646,1.591905626988,1.28050304809739,1.60819313075717,0.476293691283074,0.927074607558844,0.77163688185482,1.23625770240992,2.50238164228475,1.02860775715625,0.887379030796687,2.38436189947321,2.18019624948493,2.54095327121393,1.77690676572521,1.28049581010941,2.10455769150274,1.49384525230448,1.12228454331548,1.54225523561426,0.886540341380071,0.818462086339379,1.54936841185966,0.964533054905707,0.749431733813838,1.87145286756327,0.859484216193193,0.765153328275374,0,0.231867835620421
|phase1_expression=11.2104192973356,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.63011399117477,4.23192783417626,3.80298842103708,0,0,0,0,0,0.299600110518405,0,2.17748185847803,2.97013064329719,4.20649922702764,3.99911378165325,6.18431914664518,0.979926393719632,0.766763768145891,0,16.5173821499083,13.4071704989447,13.3637683932932,2.63772575460388,4.94033275453012,2.08365348222704,6.42120897703176,15.1945904708554,12.9878510610289,14.142172102736,14.5219114415085,4.84638559145781,0.530083353332288,0.68014404096107,0,0,0,0,0,0,0.702222100658759,0,0,0,8.73229202615419,0,0,0,0,0,0,0.34255163915718,0,1.03909497345377,0.173485326766136,0.913396434936424,0.230615497256059,0.452167921657868,0.705532242814229,0.376999773989026,0,0,0,0.161766849947409,0,0,0,3.22058876712702,2.09446706813455,0,0,0,0,24.1162929441765,26.992535566299,4.77486538028885,30.9407289942252,32.2201476236216,20.1554403222773,21.9025705141473,0.305518091550949,0,0,0.420883711772948,0.260240885925407,1.60931473103431,0.360124259610698,1.50704817835715,1.36072998302656,0.640568601424249,0.937017245597288,5.17406741478031,0,0.378212160335639,0.351902248327898,0.43839146485515,0.834141747676794,0.696504333044333,0.823128545631774,0.59710280045548,0,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0.196764231747404,0,0,0,0,0,0,0,0,0,0,31.1229123874908,4.52780294468852,0,0,1.49301775374664,0.232236671860439,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0,0,0,0.569003702859245,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0.315270288212382,0.44292937929755,0.318909537314974,0,0,0,0,0,0,0,16.6972613587304,13.0104972117346,0,0,2.2085575359138,1.56175497718655,2.36965737506079,0,0.891194696329576,1.13230612315533,2.02405350837447,3.50707029493574,1.58115111178609,28.9189184779626,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0.720244376125241,1.29358683782755,1.71469628025274,2.12808280370728,2.31879462882692,1.64549020602121,0.304464949114599,0,0,0,0.98931751764888,0.161464426695906,0.241251699712623,0.238744688006273,0.328281799490123,0,15.0194494628513,0,0.619160603889667,0,0,0,0,0.169978429993855,0,0,0,0.949007980743406,0.406638934253697,0.108005340821801,1.04544148007234,0.436725127492355,0.539457385539283,0.495920734352016,0,0,0,0,0,0,0.194451188344048,0.645799117388655,0.168956125490778,0.58678619322877,0,0,0,0,0,0.202725215290164,0.410843828659309,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.4284471600261,52.016751725311,62.4456109648942,46.228506050452,52.7513540223395,47.5898155355511,44.5514850152992,53.137901980458,46.2205257163889,46.5984280576638,0.415149390336707,1.99512436700516,1.53660245178721,0.972426868273176,0.419226325255965,0.551530525350042,1.77797382241292,0.618105171716683,1.92551525755089,1.01078884705519,1.77435509923168,1.13175804831646,1.591905626988,1.28050304809739,1.60819313075717,0.476293691283074,0.927074607558844,0.77163688185482,1.23625770240992,2.50238164228475,1.02860775715625,0.887379030796687,2.38436189947321,2.18019624948493,2.54095327121393,1.77690676572521,1.28049581010941,2.10455769150274,1.49384525230448,1.12228454331548,1.54225523561426,0.886540341380071,0.818462086339379,1.54936841185966,0.964533054905707,0.749431733813838,1.87145286756327,0.859484216193193,0.765153328275374,0,0.231867835620421
|short_description=p2@Lrrtm4
}}
}}

Latest revision as of 18:26, 1 October 2015

Short description:p2@Lrrtm4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lrrtm4_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000126005, ENSMUST00000133918_5end
EntrezGene:Lrrtm4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Lrrtm4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.94
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.73
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A424.12
corpus striatum, adult.CNhs10487.19-21D826.99
corpus striatum, neonate N00.CNhs11226.630-43F14.77
cortex, adult.CNhs10473.12-14D530.94
cortex, neonate N30.CNhs11107.1392-42F232.22
diencephalon, adult.CNhs10482.20-12F220.16
diencephalon, neonate N30.CNhs11201.1388-42B221.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E831.12
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C216.70
medulla oblongata, neonate N30.CNhs11200.1396-42A313.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I928.92
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C915.02
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A160.43
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A252.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A362.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D746.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A452.75
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A547.59
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A644.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A753.14
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A846.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A946.60
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron9.86e-1933
neuronal stem cell9.86e-1933
neuroblast9.86e-1933
electrically signaling cell9.86e-1933
CNS neuron (sensu Vertebrata)3.39e-1523
neuroblast (sensu Vertebrata)3.39e-1523
electrically responsive cell1.93e-1439
electrically active cell1.93e-1439
ectodermal cell4.86e-1344
neurectodermal cell4.86e-1344
neural cell2.81e-1243

Uber anatomy
Ontology termp-valuen
central nervous system1.14e-4073
nervous system4.58e-3975
regional part of nervous system1.87e-3454
neurectoderm3.59e-3364
neural plate3.59e-3364
presumptive neural plate3.59e-3364
ectoderm-derived structure3.60e-3395
ectoderm3.60e-3395
presumptive ectoderm3.60e-3395
neural tube2.59e-3252
neural rod2.59e-3252
future spinal cord2.59e-3252
neural keel2.59e-3252
ecto-epithelium3.80e-3073
brain1.84e-2747
future brain1.84e-2747
regional part of brain2.37e-2646
anterior neural tube1.61e-2440
gray matter2.29e-2434
regional part of forebrain1.92e-2339
forebrain1.92e-2339
future forebrain1.92e-2339
pre-chordal neural plate4.71e-2349
structure with developmental contribution from neural crest3.05e-2192
brain grey matter1.15e-1929
regional part of telencephalon1.15e-1929
telencephalon1.15e-1929
occipital lobe2.65e-1310
visual cortex2.65e-1310
neocortex2.65e-1310
cerebral cortex1.14e-1221
cerebral hemisphere1.14e-1221
pallium1.14e-1221
regional part of cerebral cortex1.74e-0917
basal ganglion2.15e-088
nuclear complex of neuraxis2.15e-088
aggregate regional part of brain2.15e-088
collection of basal ganglia2.15e-088
cerebral subcortex2.15e-088
posterior neural tube4.65e-0812
chordal neural plate4.65e-0812
tube3.09e-07114
anatomical conduit3.55e-07122
spinal cord6.00e-076
dorsal region element6.00e-076
dorsum6.00e-076
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