FFCP PHASE1:Mm9::chr16:22811472..22811486,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:22811472..22811486,-
|short_description=p1@Crygs
|description=CAGE_peak_1_at_Crygs_5end
|association_with_transcript=0bp_to_ENSMUST00000040592,NM_009967,u...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12970 | |EntrezGene=12970 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=O35486,Q3UPY3 | |UniProt=O35486,Q3UPY3 | ||
|association_with_transcript=0bp_to_ENSMUST00000040592,NM_009967,uc007ysj.2_5end | |||
|cluster_id=chr16:22811472..22811486,- | |||
|description=CAGE_peak_1_at_Crygs_5end | |||
|id=chr16:22811472..22811486,- | |||
|ontology_enrichment_celltype=CL:0002453!3.60e-11!8;CL:0000128!8.52e-09!6;CL:0000126!8.52e-09!6;CL:0000127!8.52e-09!6;CL:0000333!1.68e-08!10;CL:0000095!1.68e-08!10;CL:0000243!1.68e-08!10;CL:0000123!1.68e-08!10;CL:0000125!1.68e-08!10;CL:0000030!1.68e-08!10;CL:0000339!1.68e-08!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.52e-14,8;CL:0000128,2.44e-11,6;CL:0000126,2.44e-11,6;CL:0000127,2.44e-11,6;CL:0000333,2.80e-11,10;CL:0000095,2.80e-11,10;CL:0000243,2.80e-11,10;CL:0000123,2.80e-11,10;CL:0000125,2.80e-11,10;CL:0000030,2.80e-11,10;CL:0000339,2.80e-11,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.48e-13!9;UBERON:0000019!2.48e-13!9;UBERON:0000047!2.48e-13!9;UBERON:0004088!2.48e-13!9;UBERON:0002104!2.48e-13!9;UBERON:0001456!2.48e-13!9;UBERON:0003072!2.48e-13!9;UBERON:0003071!2.48e-13!9;UBERON:0004128!2.48e-13!9;UBERON:0001444!2.11e-10!11;UBERON:0000020!2.61e-09!12;UBERON:0001032!2.61e-09!12;UBERON:0004456!2.61e-09!12;UBERON:0005085!2.17e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.82e-17,9;UBERON:0000019,1.82e-17,9;UBERON:0000047,1.82e-17,9;UBERON:0010312,1.82e-17,9;UBERON:0004088,1.82e-17,9;UBERON:0002104,1.82e-17,9;UBERON:0001456,1.82e-17,9;UBERON:0003072,1.82e-17,9;UBERON:0004128,1.82e-17,9;UBERON:0003071,1.82e-17,9;UBERON:0001444,7.17e-14,11;UBERON:0000020,1.59e-12,12;UBERON:0001032,1.59e-12,12;UBERON:0004456,1.59e-12,12;UBERON:0000033,2.18e-11,13;UBERON:0005085,2.18e-11,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,2.73717714292689,3.67093504323363,3.12956537739216,18.3141131359575,61.2924449829176,66.8838852815535,9.09911740564856,20.125359011096,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,7.78960287347852,9.98967593836042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40444420131752,0.170430322578058,0.259786004602869,0,0,5.13305909657271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0.248813941220186,0,843.240516537101,10.7999967659044,29.657371471918,55.4591359800476,224.700883393051,576.677366806655,942.0201852545,1074.94618414921,6963.25992681135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438599962275997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06103859853227,0,0.214337035031592,0.177340233642274,0,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.551530525350042,2.22246727801615,3.09052585858341,3.53011130550997,2.52697211763797,2.02783439912192,1.32038438970253,3.09016974650612,2.75308155340938,2.35485422718014,1.90517476513229,2.43357084484197,1.15745532278223,3.29668720642645,2.94397840268795,3.08582327146874,3.54951612318675,2.38436189947321,3.19762116591123,2.25862512996793,2.96151127620868,3.47563148458268,2.36762740294059,2.44447404922551,2.80571135828869,2.37270036248348,2.36410757701352,1.63692417267876,2.63392630016142,1.73615949883027,4.99621155875892,3.50897412668113,6.44613162144895,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,2.73717714292689,3.67093504323363,3.12956537739216,18.3141131359575,61.2924449829176,66.8838852815535,9.09911740564856,20.125359011096,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,7.78960287347852,9.98967593836042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40444420131752,0.170430322578058,0.259786004602869,0,0,5.13305909657271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0.248813941220186,0,843.240516537101,10.7999967659044,29.657371471918,55.4591359800476,224.700883393051,576.677366806655,942.0201852545,1074.94618414921,6963.25992681135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438599962275997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06103859853227,0,0.214337035031592,0.177340233642274,0,0.329098041204242,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.551530525350042,2.22246727801615,3.09052585858341,3.53011130550997,2.52697211763797,2.02783439912192,1.32038438970253,3.09016974650612,2.75308155340938,2.35485422718014,1.90517476513229,2.43357084484197,1.15745532278223,3.29668720642645,2.94397840268795,3.08582327146874,3.54951612318675,2.38436189947321,3.19762116591123,2.25862512996793,2.96151127620868,3.47563148458268,2.36762740294059,2.44447404922551,2.80571135828869,2.37270036248348,2.36410757701352,1.63692417267876,2.63392630016142,1.73615949883027,4.99621155875892,3.50897412668113,6.44613162144895,0,0,0 | ||
|short_description=p1@Crygs | |||
}} | }} |
Latest revision as of 18:45, 1 October 2015
Short description: | p1@Crygs |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Crygs_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 0bp_to_ENSMUST00000040592, NM_009967, uc007ysj.2_5end |
EntrezGene: | Crygs |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.52e-14 | 8 |
oligodendrocyte | 2.44e-11 | 6 |
macroglial cell | 2.44e-11 | 6 |
astrocyte | 2.44e-11 | 6 |
migratory neural crest cell | 2.80e-11 | 10 |
neuron associated cell | 2.80e-11 | 10 |
glial cell (sensu Vertebrata) | 2.80e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 2.80e-11 | 10 |
glial cell | 2.80e-11 | 10 |
glioblast | 2.80e-11 | 10 |
glioblast (sensu Vertebrata) | 2.80e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
eye | 1.82e-17 | 9 |
camera-type eye | 1.82e-17 | 9 |
simple eye | 1.82e-17 | 9 |
immature eye | 1.82e-17 | 9 |
ocular region | 1.82e-17 | 9 |
visual system | 1.82e-17 | 9 |
face | 1.82e-17 | 9 |
optic cup | 1.82e-17 | 9 |
optic vesicle | 1.82e-17 | 9 |
eye primordium | 1.82e-17 | 9 |
subdivision of head | 7.17e-14 | 11 |
sense organ | 1.59e-12 | 12 |
sensory system | 1.59e-12 | 12 |
entire sense organ system | 1.59e-12 | 12 |
head | 2.18e-11 | 13 |
ectodermal placode | 2.18e-11 | 13 |