FFCP PHASE1:Mm9::chr5:122161794..122161868,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:122161794..122161868,+
|short_description=p1@Atxn2
|description=CAGE_peak_1_at_Atxn2_5end
|association_with_transcript=176bp_to_ENSMUST00000168865_5end
|E...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20239 | |EntrezGene=20239 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PZC0 | |UniProt=E9PZC0 | ||
|association_with_transcript=176bp_to_ENSMUST00000168865_5end | |||
|cluster_id=chr5:122161794..122161868,+ | |||
|description=CAGE_peak_1_at_Atxn2_5end | |||
|id=chr5:122161794..122161868,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.20e-10!50;CL:0002319!3.76e-09!43;CL:0000221!3.78e-09!44;CL:0000133!3.78e-09!44;CL:0002321!3.55e-08!70;CL:0000220!3.55e-08!70;CL:0000393!2.84e-07!39;CL:0000211!2.84e-07!39;CL:0000107!4.31e-07!9;CL:0000540!4.88e-07!33;CL:0000047!4.88e-07!33;CL:0000031!4.88e-07!33;CL:0000404!4.88e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.76e-09,43;CL:0000221,3.78e-09,44;CL:0000133,3.78e-09,44;CL:0002321,3.55e-08,70;CL:0000393,2.84e-07,39;CL:0000211,2.84e-07,39;CL:0000107,4.31e-07,9;CL:0000540,4.88e-07,33;CL:0000047,4.88e-07,33;CL:0000031,4.88e-07,33;CL:0000404,4.88e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.94e-12!73;UBERON:0005743!1.94e-12!73;UBERON:0000073!3.98e-12!75;UBERON:0001016!3.98e-12!75;UBERON:0004121!3.90e-10!102;UBERON:0000924!3.90e-10!102;UBERON:0006601!3.90e-10!102;UBERON:0000468!1.37e-09!333;UBERON:0000025!2.60e-09!114;UBERON:0000922!2.63e-08!328;UBERON:0004111!3.45e-08!122;UBERON:0002410!4.31e-07!9;UBERON:0002346!6.86e-07!71;UBERON:0003075!6.86e-07!71;UBERON:0007284!6.86e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.94e-12,73;UBERON:0001016,3.98e-12,75;UBERON:0010314,9.94e-11,92;UBERON:0004121,1.74e-09,95;UBERON:0000924,1.74e-09,95;UBERON:0006601,1.74e-09,95;UBERON:0000025,2.60e-09,114;UBERON:0000922,2.97e-09,320;UBERON:0004111,3.45e-08,122;UBERON:0002410,4.31e-07,9 | |||
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|phase1_expression=41.6387002472464,40.4811472861659,46.8649216571222,45.9745601186382,50.0895729946347,30.0503896722283,32.4721570427781,21.5635950147432,42.0958279233484,46.5788407380767,24.4841694562472,34.7008891629713,23.7969014604376,22.4670434216823,26.9818907070687,28.7514879693553,38.4759032970481,18.7699988388151,18.7846774039862,20.3707032863054,42.8618182361392,16.9787526553514,12.7987896678078,22.3989391910769,20.6468352960453,26.988902313406,23.6919097887491,20.6852383378453,17.8622014288991,29.7395553116718,16.6297882991479,28.5763803056834,44.8997294936736,31.6963362030877,27.7297554961224,29.0910629377362,36.1379760584393,15.9042019680025,7.813353445238,19.3703785270305,29.9998058895817,21.8574555186703,21.3624555333708,45.8264417431101,44.6058497365864,34.5067894063961,62.5913075478431,41.4247797122848,65.9058548203415,50.1629139611651,35.2765782495914,50.3133975277401,21.9795213935635,29.7398478224651,26.5514101322547,39.6179531495358,40.9742819112422,44.8634720281375,45.7235201542691,40.7323054039465,53.2418378945191,42.6944110407106,32.9039074561122,35.5460388326153,29.6659908770092,32.6820852875206,59.6204219931625,83.7595905600989,38.2614669418283,39.5567399311854,34.703618622978,48.8463183330504,37.5476519617743,36.9922213629161,34.6002150375833,33.0918763179608,52.8556228797066,48.6488758104565,45.3139273105918,47.6109498706,42.8162172059277,38.5475894212002,46.6235608332306,36.0168070420275,42.9363076252836,49.2029737741025,41.1454157509407,45.8542636730239,34.0010608065996,38.8437818948878,37.9722480199198,52.4858564958646,17.6792546764015,67.4628989547271,77.9731700937203,106.182372242069,34.4088829322792,17.724753548118,11.1707981979234,12.0135455333516,40.562904895684,56.4636500622998,50.9610479413291,42.6640021891999,18.8347205679756,22.2956681618087,18.1988800205322,43.5040581729618,19.4203412735379,43.3451046069288,38.5137425420822,34.404599049272,45.2006374621875,38.4342733409188,47.5058376828247,46.1196390179909,47.9558237404685,82.1324347305098,20.3460426948471,48.6918218341702,39.5306318044104,35.8807687320064,24.2309289583559,42.7459963636859,46.0782754989601,29.377561348988,15.4561510612637,10.1983464268879,11.1821799824297,41.4920071151359,37.0575488283087,46.1151472254212,38.9366477230699,47.8187905207718,44.4666415357459,53.0528930231567,36.6621709861139,31.1017426525233,23.2504937758981,36.40644106836,35.0023991569673,31.0367840985188,33.6716182736003,37.6762044589288,56.0620753006942,41.5088453722913,48.1626864237006,41.1338359475035,31.6884949611278,44.8181409997732,41.348514178528,34.8521214559844,33.9217644055229,42.4867643157043,28.3979348242962,40.2049218973356,12.6398373716382,6.94839349209731,9.37739548005456,47.8460534557009,38.6967998968809,31.3307986942166,47.5856918526273,40.5334317399652,36.2527715285339,45.5766531710799,51.5084930687269,50.0923318755157,57.9250671695451,49.2502392237286,70.1245202571652,69.5911940144582,59.4980812438747,60.5270948609277,43.1094394556461,42.1908910755066,36.015647345234,35.965277066242,31.9932375802851,35.996684138368,39.5623106258827,38.3198696784351,33.8014626644203,28.5338439168839,33.6915633696603,31.9515972164581,36.1922700672388,32.6288614147487,41.1374223821343,44.9409704327111,29.6109128328331,35.6462879125317,29.3985246477277,37.0165180855521,52.9726357663478,30.9550018324878,36.8509725618489,49.5860246624552,47.8068220659385,44.7258748378195,41.4476641501229,43.0656102087084,48.0253255881181,29.3647386060326,27.7148183109616,27.4331777109522,29.8204378441099,31.3530307678142,25.462585178142,37.6881940060562,58.8550873193378,39.8114049122718,94.887016308054,62.5196792083086,49.3019523521006,67.691139289826,55.4338007782709,72.8489717258684,31.777548708656,32.9715056480644,37.644909558108,30.3843703537587,30.5097322775053,35.0088078053395,35.4685024920161,55.8082232873305,34.5220965592558,36.7631384816966,47.1986115226162,31.7894830548532,32.9828315363861,36.0176155867964,33.1740824666399,19.5806046174735,25.5717421969899,31.1808523324348,43.0275581167282,55.7927628178887,25.9017213695147,58.5732551114145,59.9465616890888,58.5658116444958,74.967342411014,79.8155785161524,89.1194696329576,99.642938837669,76.1044119148801,72.4794527620054,63.2460444714438,49.8048040453801,40.0271040287317,31.8737430564387,46.5856703751228,50.4808576295959,30.5313818181915,27.6769925216679,29.3253850255809,22.4440044909519,27.4630760379119,28.2840336108413,37.9889590957285,29.4462320876779,30.3022771627013,36.9763006784905,31.6255825724996,33.0033738394198,30.6395645178409,33.4913634898237,35.4442793564747,43.5104181114132,38.8375111676579,39.7762463252617,34.5552943264454,37.1447237919811,33.0887108369832,44.2729028105384,23.376010193826,34.7909993706523,30.3553122188302,37.0321359058877,25.1875645846618,30.5302073525814,35.2691812322119,48.2105785227325,27.3393409276564,29.1005483828144,26.1124283591293,30.1389531207506,30.6195070095096,34.7742823273914,11.3885548095883,16.0944170172207,17.5513966731618,26.7307773044232,36.69497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| ||
|short_description=p1@Atxn2 | |||
}} | }} |
Latest revision as of 19:34, 1 October 2015
Short description: | p1@Atxn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Atxn2_5end |
Coexpression cluster: | NA |
Association with transcript: | 176bp_to_ENSMUST00000168865_5end |
EntrezGene: | Atxn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.76e-09 | 43 |
ectodermal cell | 3.78e-09 | 44 |
neurectodermal cell | 3.78e-09 | 44 |
embryonic cell | 3.55e-08 | 70 |
electrically responsive cell | 2.84e-07 | 39 |
electrically active cell | 2.84e-07 | 39 |
autonomic neuron | 4.31e-07 | 9 |
neuron | 4.88e-07 | 33 |
neuronal stem cell | 4.88e-07 | 33 |
neuroblast | 4.88e-07 | 33 |
electrically signaling cell | 4.88e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.94e-12 | 73 |
nervous system | 3.98e-12 | 75 |
structure with developmental contribution from neural crest | 9.94e-11 | 92 |
ectoderm-derived structure | 1.74e-09 | 95 |
ectoderm | 1.74e-09 | 95 |
presumptive ectoderm | 1.74e-09 | 95 |
tube | 2.60e-09 | 114 |
embryo | 2.97e-09 | 320 |
anatomical conduit | 3.45e-08 | 122 |
autonomic nervous system | 4.31e-07 | 9 |