Personal tools

FFCP PHASE1:Mm9::chr11:59778438..59778453,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr11:59778438..59778453,- |short_description=p1@Rasd1 |description=CAGE_peak_1_at_Rasd1_5end |association_with_transcript=0bp_to_ENSMUST00000062405,NM_009026,u...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:59778438..59778453,-
|DHSsupport=NA
|short_description=p1@Rasd1
|DPIdataset=NA
|description=CAGE_peak_1_at_Rasd1_5end
|association_with_transcript=0bp_to_ENSMUST00000062405,NM_009026,uc007jfh.1_5end
|EntrezGene=19416
|EntrezGene=19416
|HGNC=
|HGNC=
|MCL_coexpression_id=58
|TSSclassifier=NA
|UniProt=O35626,Q5SWR8
|UniProt=O35626,Q5SWR8
|association_with_transcript=0bp_to_ENSMUST00000062405,NM_009026,uc007jfh.1_5end
|cluster_id=chr11:59778438..59778453,-
|description=CAGE_peak_1_at_Rasd1_5end
|id=chr11:59778438..59778453,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005156!3.81e-11!26;UBERON:0000990!3.81e-11!26;UBERON:0003133!2.38e-10!24;UBERON:0007023!1.04e-09!51;UBERON:0003101!6.09e-08!16;UBERON:0000079!6.09e-08!16;UBERON:0003135!1.19e-07!15;UBERON:0000991!2.08e-07!18;UBERON:0005564!2.08e-07!18;UBERON:0004176!3.17e-07!17;UBERON:0009196!3.17e-07!17;UBERON:0009117!3.17e-07!17;UBERON:0000473!5.35e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0005156,3.18e-11,26;UBERON:0000990,3.18e-11,26;UBERON:0003133,2.02e-10,24;UBERON:0007023,1.08e-09,51;UBERON:0003101,5.40e-08,16;UBERON:0000079,5.40e-08,16;UBERON:0003135,1.06e-07,15;UBERON:0000991,1.86e-07,18;UBERON:0005564,1.86e-07,18;UBERON:0004176,2.85e-07,17;UBERON:0009196,2.85e-07,17;UBERON:0009117,2.85e-07,17;UBERON:0000473,4.83e-07,14
|phase1_expression=7.68714466103011,268.013113067029,302.574494194041,50.5115232882406,65.1164448930251,116.172456163028,126.85166384337,0.645616617207881,14.0788722151667,23.1723881058774,0,0.239316476986009,0.684802919724823,0.786783621770977,0,0.607425802169478,0,1.73504190947031,1.37114433605739,2.54633791078818,20.5804762165589,0.794327609607082,0.261199789138935,57.1172949372462,51.1582696779789,264.146703492909,212.365664106424,200.819188863249,3.23039813075836,2.01624103807945,65.8539616646255,6.98533740805594,3.69038872550742,0,18.1976520443303,10.9714865936605,32.6670970019791,0.837063261473815,0,0.523523743973798,1.17646297606203,0,0,0,0.304130793658544,0.367093504323363,1.56478268869608,0,0.439372365468944,0.972149495371417,23.0977595681848,0,41.2745210902031,6.5282592781021,3.02484419228218,0.257259436035947,0.286533439938757,3.6097046459421,0.606949382578793,0.528990979272033,0,5.08266798103698,7.11435836888911,0,0,0,1.19840044207362,0.768436610643109,0.103689612308478,0.540023753326763,0.420649922702764,1.42825492201902,1.10434270475807,0.122490799214954,0.287536413054709,0,14.3150645299205,40.0938241587489,28.5708151856613,1.18697658957174,0.640413505216868,0,5.02529398202486,10.1297269805702,5.80633341551878,1.17851434189467,1.70846016958924,0.372798891650601,1.81742863999642,1.66257432234928,78.263411949453,12.0459342777394,18.3592260101093,0,0.649776417447669,0.896053774194671,7.02222100658759,0,0.259786004602869,0.35333957451034,9.15482228548423,0,2.54805239706646,0,0,0,0,11.0758363327488,3.10725460376606,40.673146103762,3.12273588179045,4.56698217468212,5.07354093963329,6.78251882486802,10.5829836422134,33.5529798850234,45.7310690308592,152.407722193587,1.76922110389975,2.58826959915855,5.07935492458905,6.30337829075789,18.6391761218122,5.85561594023094,4.60782754989601,7.15279754584056,2.03685711660064,2.39961092397363,2.41433431438823,9.8861822007183,16.0125210986519,0,4.69325664519146,6.90431734791892,54.4404676746047,35.8553191379744,4.48093200941392,56.231950715762,262.326223254154,4.41927897361595,2.34216797332867,0,0.900310649026746,1.05493372485001,2.4493139694478,0.896796041993948,1.78033276663485,4.65666067330228,1.07783996466421,1.51284864134255,1.75951124163949,2.84954452155847,1.66828349535359,2.43776516565517,1.85203922767149,9.95171334092466,3.51106593656617,0.772043721344145,1.13665399758237,12.8417978972011,11.9608290590359,7.74266864282364,7.10234206755631,7.67380503814875,6.94202007993202,7.90615412151387,7.24338183778972,8.52386999280337,7.5697530960201,8.86504306027114,11.9171150032408,10.3801991071986,16.0271584162467,13.4206418760372,51.1004575010829,2.46971069710283,3.63460661282178,8.46241813323342,2.34617075588757,1.39342003116263,0.77320476793256,1.61346819698674,1.55664630691409,1.71203063501303,2.37264530772256,2.30578536613615,5.27803938480566,4.17808591286417,7.99352757188393,3.59527763461689,11.2391785934841,12.7450414882795,3.03468641524931,2.74196430263349,4.50830942692322,3.86937522906097,2.13347735884388,9.95928642442524,8.09427675190493,11.8088118383682,9.26292494264111,18.7563689161137,1.48226313543574,1.00107063429656,1.76903095601883,1.12431056192427,0.405720242777006,2.17059443777175,3.56476192493988,5.17853047411459,6.80967952455149,2.19649130550465,5.75072826109418,6.32639611036456,2.49630138491648,1.01031551178845,1.79397413521912,0.482443521363367,6.28160846566456,3.97931964718018,2.77040459951444,2.54617628662782,0.938760993154008,2.34508760418542,2.38043640886014,4.68320754858717,1.89162172927429,1.99318220683897,2.39182152986231,5.24362607090362,6.21665934717224,9.40218880779825,0,0,25.0799779239708,46.3573733791951,9.15138362930414,8.20481806145422,0,10.0988370881749,0.315508219416257,0.390438744296638,0.861693590931196,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0,5.14114106274891,86.5834519770439,5.87616492101942,4.88660878060728,34.3137855782874,2.65490276679926,6.31229654002952,7.86041248108353,9.43025398779491,9.15435867930396,4.91896236710284,4.39328098385976,23.2661586865604,28.5197902707777,7.58488219045958,4.21674434299995,7.21948802737308,141.282436387822,0.720244376125241,1.81102157295856,2.7863814554107,46.8178216815602,50.656744198988,54.1366277780978,115.392215714433,14.3149741918863,35.375955834258,14.3343458735725,17.6428290647384,9.04200789497071,24.7886121454721,17.6671069124642,7.71462228801788,3.20628920292836,4.45020724825223,0.683483523191411,6.19160603889667,4.07427960213366,1.13021074202815,0.410082683163076,1.14389086603261,4.24946074984638,10.216456019627,7.04819866402561,10.5013767981662,2.37251995185852,2.43983360552218,1.40406943068342,1.88179466413022,1.74690050996942,1.75323650300267,2.56225712748541,7.32916637555283,15.035336901848,25.474911836564,43.9680492173668,26.3149121037403,30.6098207345631,28.0009711215429,32.677435339866,30.9189709648124,23.8235194450881,30.9886435928601,49.8081886022127,36.4792022447269,31.6833006883652,6.63623353319174,1.01362607645082,1.64337531463724,1.55904987573354,1.43221356533985,2.38417625737518,0.240390899039938,0.738447635872886,2.52416124870369,1.295515713135,1.41156659191577,2.24153125701431,1.05833025804362,1.98690733708667,3.62768613784338,13.0971712490698,2.24284641523689,20.4819231964176,15.0687883345109,76.9498149349846,147.070754286614,15.0057865355346,18.0565957452731,2.82375921308533,0.920650473014354,1.14579102687879,1.3748254587495,2.05524755931193,1.5107877947794,0.675022500231806,2.2516060161211,4.98456649882625,4.14208249401456,1.14166082342594,1.59609949360412,1.02440163452481,1.21553358534147,1.88651846365184,6.25067928730048,6.66740183404846,5.35691148821125,7.38114182061175,3.79045817645696,6.33698249725599,6.97917463128482,4.58843386602424,4.1616349063165,5.05432126809397,3.33405583898152,5.56244764535306,4.82273051159263,7.82963211526283,7.06554816645107,5.14303878578123,4.79184676630211,5.00715998889374,6.24989591519013,5.74067220533517,6.59993941555077,4.75612729469209,6.31367307450823,5.70377278152619,8.41713407486608,7.59264115994714,4.92522411877817,4.91077251803627,5.26785260032284,4.43685205256625,3.99696924700713,5.14649538579898,8.37997110788363,12.242453252406,13.4560765662904,17.1582198359112
|phase1_expression=7.68714466103011,268.013113067029,302.574494194041,50.5115232882406,65.1164448930251,116.172456163028,126.85166384337,0.645616617207881,14.0788722151667,23.1723881058774,0,0.239316476986009,0.684802919724823,0.786783621770977,0,0.607425802169478,0,1.73504190947031,1.37114433605739,2.54633791078818,20.5804762165589,0.794327609607082,0.261199789138935,57.1172949372462,51.1582696779789,264.146703492909,212.365664106424,200.819188863249,3.23039813075836,2.01624103807945,65.8539616646255,6.98533740805594,3.69038872550742,0,18.1976520443303,10.9714865936605,32.6670970019791,0.837063261473815,0,0.523523743973798,1.17646297606203,0,0,0,0.304130793658544,0.367093504323363,1.56478268869608,0,0.439372365468944,0.972149495371417,23.0977595681848,0,41.2745210902031,6.5282592781021,3.02484419228218,0.257259436035947,0.286533439938757,3.6097046459421,0.606949382578793,0.528990979272033,0,5.08266798103698,7.11435836888911,0,0,0,1.19840044207362,0.768436610643109,0.103689612308478,0.540023753326763,0.420649922702764,1.42825492201902,1.10434270475807,0.122490799214954,0.287536413054709,0,14.3150645299205,40.0938241587489,28.5708151856613,1.18697658957174,0.640413505216868,0,5.02529398202486,10.1297269805702,5.80633341551878,1.17851434189467,1.70846016958924,0.372798891650601,1.81742863999642,1.66257432234928,78.263411949453,12.0459342777394,18.3592260101093,0,0.649776417447669,0.896053774194671,7.02222100658759,0,0.259786004602869,0.35333957451034,9.15482228548423,0,2.54805239706646,0,0,0,0,11.0758363327488,3.10725460376606,40.673146103762,3.12273588179045,4.56698217468212,5.07354093963329,6.78251882486802,10.5829836422134,33.5529798850234,45.7310690308592,152.407722193587,1.76922110389975,2.58826959915855,5.07935492458905,6.30337829075789,18.6391761218122,5.85561594023094,4.60782754989601,7.15279754584056,2.03685711660064,2.39961092397363,2.41433431438823,9.8861822007183,16.0125210986519,0,4.69325664519146,6.90431734791892,54.4404676746047,35.8553191379744,4.48093200941392,56.231950715762,262.326223254154,4.41927897361595,2.34216797332867,0,0.900310649026746,1.05493372485001,2.4493139694478,0.896796041993948,1.78033276663485,4.65666067330228,1.07783996466421,1.51284864134255,1.75951124163949,2.84954452155847,1.66828349535359,2.43776516565517,1.85203922767149,9.95171334092466,3.51106593656617,0.772043721344145,1.13665399758237,12.8417978972011,11.9608290590359,7.74266864282364,7.10234206755631,7.67380503814875,6.94202007993202,7.90615412151387,7.24338183778972,8.52386999280337,7.5697530960201,8.86504306027114,11.9171150032408,10.3801991071986,16.0271584162467,13.4206418760372,51.1004575010829,2.46971069710283,3.63460661282178,8.46241813323342,2.34617075588757,1.39342003116263,0.77320476793256,1.61346819698674,1.55664630691409,1.71203063501303,2.37264530772256,2.30578536613615,5.27803938480566,4.17808591286417,7.99352757188393,3.59527763461689,11.2391785934841,12.7450414882795,3.03468641524931,2.74196430263349,4.50830942692322,3.86937522906097,2.13347735884388,9.95928642442524,8.09427675190493,11.8088118383682,9.26292494264111,18.7563689161137,1.48226313543574,1.00107063429656,1.76903095601883,1.12431056192427,0.405720242777006,2.17059443777175,3.56476192493988,5.17853047411459,6.80967952455149,2.19649130550465,5.75072826109418,6.32639611036456,2.49630138491648,1.01031551178845,1.79397413521912,0.482443521363367,6.28160846566456,3.97931964718018,2.77040459951444,2.54617628662782,0.938760993154008,2.34508760418542,2.38043640886014,4.68320754858717,1.89162172927429,1.99318220683897,2.39182152986231,5.24362607090362,6.21665934717224,9.40218880779825,0,0,25.0799779239708,46.3573733791951,9.15138362930414,8.20481806145422,0,10.0988370881749,0.315508219416257,0.390438744296638,0.861693590931196,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0,5.14114106274891,86.5834519770439,5.87616492101942,4.88660878060728,34.3137855782874,2.65490276679926,6.31229654002952,7.86041248108353,9.43025398779491,9.15435867930396,4.91896236710284,4.39328098385976,23.2661586865604,28.5197902707777,7.58488219045958,4.21674434299995,7.21948802737308,141.282436387822,0.720244376125241,1.81102157295856,2.7863814554107,46.8178216815602,50.656744198988,54.1366277780978,115.392215714433,14.3149741918863,35.375955834258,14.3343458735725,17.6428290647384,9.04200789497071,24.7886121454721,17.6671069124642,7.71462228801788,3.20628920292836,4.45020724825223,0.683483523191411,6.19160603889667,4.07427960213366,1.13021074202815,0.410082683163076,1.14389086603261,4.24946074984638,10.216456019627,7.04819866402561,10.5013767981662,2.37251995185852,2.43983360552218,1.40406943068342,1.88179466413022,1.74690050996942,1.75323650300267,2.56225712748541,7.32916637555283,15.035336901848,25.474911836564,43.9680492173668,26.3149121037403,30.6098207345631,28.0009711215429,32.677435339866,30.9189709648124,23.8235194450881,30.9886435928601,49.8081886022127,36.4792022447269,31.6833006883652,6.63623353319174,1.01362607645082,1.64337531463724,1.55904987573354,1.43221356533985,2.38417625737518,0.240390899039938,0.738447635872886,2.52416124870369,1.295515713135,1.41156659191577,2.24153125701431,1.05833025804362,1.98690733708667,3.62768613784338,13.0971712490698,2.24284641523689,20.4819231964176,15.0687883345109,76.9498149349846,147.070754286614,15.0057865355346,18.0565957452731,2.82375921308533,0.920650473014354,1.14579102687879,1.3748254587495,2.05524755931193,1.5107877947794,0.675022500231806,2.2516060161211,4.98456649882625,4.14208249401456,1.14166082342594,1.59609949360412,1.02440163452481,1.21553358534147,1.88651846365184,6.25067928730048,6.66740183404846,5.35691148821125,7.38114182061175,3.79045817645696,6.33698249725599,6.97917463128482,4.58843386602424,4.1616349063165,5.05432126809397,3.33405583898152,5.56244764535306,4.82273051159263,7.82963211526283,7.06554816645107,5.14303878578123,4.79184676630211,5.00715998889374,6.24989591519013,5.74067220533517,6.59993941555077,4.75612729469209,6.31367307450823,5.70377278152619,8.41713407486608,7.59264115994714,4.92522411877817,4.91077251803627,5.26785260032284,4.43685205256625,3.99696924700713,5.14649538579898,8.37997110788363,12.242453252406,13.4560765662904,17.1582198359112
|short_description=p1@Rasd1
}}
}}

Latest revision as of 19:46, 1 October 2015

Short description:p1@Rasd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rasd1_5end
Coexpression cluster:MCL_coexpression_mm9:58
Association with transcript: 0bp_to_ENSMUST00000062405, NM_009026, uc007jfh.1_5end
EntrezGene:Rasd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rasd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5268.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6302.57
CD326+ enterocyte, pool1.CNhs13542.11848-124I350.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I465.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7116.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8126.85
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F223.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D157.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D251.16
GP2+ M cell, pool1.CNhs13228.11845-124H9264.15
GP2+ M cell, pool2.CNhs13231.11846-124I1212.37
GP2+ M cell, pool3.CNhs13240.11847-124I2200.82
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C865.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F518.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F732.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C423.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A241.27
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F340.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G378.26
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C418.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.08
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D740.67
adrenal gland, embryo E14.CNhs11038.406-44C53.12
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I15.07
adrenal gland, embryo E18.CNhs11026.1262-18F56.78
adrenal gland, neonate N00.CNhs11191.1311-23C110.58
adrenal gland, neonate N25.CNhs11223.1377-27I333.55
amnion, adult pregnant day17.5.CNhs10488.583-22A845.73
aorta, adult.CNhs10498.46-23H1152.41
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A49.89
corpus striatum, adult.CNhs10487.19-21D816.01
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F254.44
diencephalon, neonate N30.CNhs11201.1388-42B235.86
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A256.23
epididymis, adult.CNhs10490.58-23B2262.33
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I69.95
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E912.84
heart, embryo E12.CNhs11015.353-12F511.96
heart, embryo E13.CNhs11013.376-3I97.74
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C66.94
heart, embryo E17.CNhs11025.479-18E57.91
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E38.52
heart, neonate N03.CNhs11221.1349-25I27.57
heart, neonate N10.CNhs11118.749-24G18.87
heart, neonate N16.CNhs11209.782-15G111.92
heart, neonate N20.CNhs11127.821-26I610.38
heart, neonate N25.CNhs11196.1351-25D316.03
heart, neonate N30.CNhs11202.1390-42D213.42
hippocampus, adult.CNhs10478.13-16E851.10
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A38.46
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A57.99
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E311.24
intestine, neonate N30.CNhs11131.1384-42G112.75
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G79.96
kidney, neonate N10.CNhs11206.758-6D58.09
kidney, neonate N20.CNhs11113.832-19I111.81
kidney, neonate N25.CNhs11122.1353-25F39.26
kidney, neonate N30.CNhs11203.1385-42H118.76
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F46.81
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A45.24
lung, neonate N25.CNhs11119.1359-25C76.22
lung, neonate N30.CNhs11133.1394-42H29.40
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B625.08
mammary gland, adult pregnant day19.CNhs10476.588-5H246.36
medulla oblongata, adult.CNhs10477.17-12C29.15
medulla oblongata, neonate N30.CNhs11200.1396-42A38.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.10
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I786.58
ovary, embryo E18.CNhs11040.505-44H75.88
ovary, neonate N00.CNhs11217.1299-22I44.89
oviduct, adult pregnant day01.CNhs10500.988-6G634.31
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E59.43
pancreas, embryo E17.CNhs10599.1558-45G39.15
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D723.27
pancreas, neonate N02.CNhs11139.1539-43D828.52
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G8141.28
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B946.82
pituitary gland, embryo E16.CNhs11036.449-43F650.66
pituitary gland, embryo E17.CNhs11039.1265-44F554.14
pituitary gland, neonate N00.CNhs11190.1308-22E9115.39
placenta, adult pregnant day10.CNhs10472.539-13I714.31
placenta, adult pregnant day17.CNhs10464.577-18G335.38
prostate, adult.CNhs10470.859-1F814.33
skin, adult.CNhs10492.30-1C317.64
skin, neonate N00.CNhs11124.650-25G49.04
skin, neonate N03.CNhs11215.662-22H324.79
skin, neonate N06.CNhs11097.693-20I517.67
skin, neonate N10.CNhs11108.762-6C47.71
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C16.19
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.05
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E47.33
stomach, neonate N30.CNhs11134.1386-42I115.04
submandibular gland, adult.CNhs10469.59-29C125.47
testis, adult.CNhs10504.57-7G543.97
testis, embryo E13.CNhs11031.389-23F526.31
testis, embryo E15.CNhs11034.443-27C530.61
testis, embryo E16.CNhs11033.470-26G528.00
testis, embryo E17.CNhs11029.486-18I532.68
testis, embryo E18.CNhs11027.503-18G530.92
testis, neonate N00.CNhs11189.1300-22B723.82
testis, neonate N07.CNhs11222.726-26I430.99
testis, neonate N10.CNhs11204.763-44D949.81
testis, neonate N20.CNhs11110.839-18H336.48
testis, neonate N30.CNhs11130.1391-42E231.68
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A22.24
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G520.48
urinary bladder, adult.CNhs10481.879-12E415.07
uterus, adult pregnant day19.CNhs10497.590-15F576.95
uterus, adult.CNhs10509.92-27E5147.07
vagina, adult.CNhs10502.89-27D515.01
vesicular gland, adult.CNhs10491.51-27F818.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C28.38
whole body, neonate N01.CNhs10576.659-23C612.24
whole body, neonate N06.CNhs10515.692-21D113.46
whole body, neonate N10.CNhs10518.761-6B417.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
reproductive structure3.18e-1126
reproductive system3.18e-1126
reproductive organ2.02e-1024
adult organism1.08e-0951
male organism5.40e-0816
male reproductive system5.40e-0816
male reproductive organ1.06e-0715
gonad1.86e-0718
gonad primordium1.86e-0718
external genitalia2.85e-0717
indifferent external genitalia2.85e-0717
indifferent gonad2.85e-0717
testis4.83e-0714
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:59778438..59778453,-&oldid=4319106"