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FFCP PHASE1:Mm9::chr3:158224322..158224386,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=242274
|EntrezGene=242274
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q80TE7
|UniProt=Q80TE7
|association_with_transcript=-2bp_to_ENSMUST00000029826_5end
|association_with_transcript=-2bp_to_ENSMUST00000029826_5end
|cluster_id=chr3:158224322..158224386,-
|description=CAGE_peak_2_at_Lrrc7_5end
|description=CAGE_peak_2_at_Lrrc7_5end
|id=chr3:158224322..158224386,-
|id=chr3:158224322..158224386,-
|ontology_enrichment_celltype=CL:0000117!1.36e-13!23;CL:0000337!1.36e-13!23;CL:0000540!4.80e-13!33;CL:0000047!4.80e-13!33;CL:0000031!4.80e-13!33;CL:0000404!4.80e-13!33;CL:0000393!9.49e-09!39;CL:0000211!9.49e-09!39;CL:0000221!1.44e-08!44;CL:0000133!1.44e-08!44;CL:0002319!2.15e-08!43
|ontology_enrichment_celltype=CL:0000117!1.36e-13!23;CL:0000337!1.36e-13!23;CL:0000540!4.80e-13!33;CL:0000047!4.80e-13!33;CL:0000031!4.80e-13!33;CL:0000404!4.80e-13!33;CL:0000393!9.49e-09!39;CL:0000211!9.49e-09!39;CL:0000221!1.44e-08!44;CL:0000133!1.44e-08!44;CL:0002319!2.15e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,6.66e-18,23;CL:0000337,6.66e-18,23;CL:0000540,8.28e-13,33;CL:0000047,8.28e-13,33;CL:0000031,8.28e-13,33;CL:0000404,8.28e-13,33;CL:0000393,1.85e-09,39;CL:0000211,1.85e-09,39;CL:0000221,5.02e-08,44;CL:0000133,5.02e-08,44;CL:0002319,8.42e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.98e-24!73;UBERON:0005743!6.98e-24!73;UBERON:0000073!8.39e-23!75;UBERON:0001016!8.39e-23!75;UBERON:0001049!2.52e-21!52;UBERON:0005068!2.52e-21!52;UBERON:0006241!2.52e-21!52;UBERON:0007135!2.52e-21!52;UBERON:0000033!1.81e-20!63;UBERON:0000955!2.47e-20!50;UBERON:0006238!2.47e-20!50;UBERON:0002616!1.28e-19!49;UBERON:0003056!2.25e-19!49;UBERON:0002020!2.45e-19!34;UBERON:0002346!3.39e-19!71;UBERON:0003075!3.39e-19!71;UBERON:0007284!3.39e-19!71;UBERON:0004121!2.72e-18!102;UBERON:0000924!2.72e-18!102;UBERON:0006601!2.72e-18!102;UBERON:0003080!9.01e-18!40;UBERON:0002780!4.14e-17!39;UBERON:0001890!4.14e-17!39;UBERON:0006240!4.14e-17!39;UBERON:0002791!2.85e-16!29;UBERON:0003528!2.85e-16!29;UBERON:0001893!2.85e-16!29;UBERON:0000956!2.39e-12!21;UBERON:0001869!2.39e-12!21;UBERON:0000203!2.39e-12!21;UBERON:0000153!4.81e-10!94;UBERON:0002619!5.84e-10!17;UBERON:0007811!1.08e-09!86;UBERON:0002021!6.98e-09!10;UBERON:0000411!6.98e-09!10;UBERON:0001950!6.98e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.00e-26,54;UBERON:0002020,1.40e-25,34;UBERON:0001049,2.37e-24,52;UBERON:0005068,2.37e-24,52;UBERON:0006241,2.37e-24,52;UBERON:0007135,2.37e-24,52;UBERON:0001017,5.31e-24,73;UBERON:0002346,3.93e-23,64;UBERON:0003075,3.93e-23,64;UBERON:0007284,3.93e-23,64;UBERON:0001016,7.82e-23,75;UBERON:0003528,2.07e-21,29;UBERON:0002791,2.07e-21,29;UBERON:0001893,2.07e-21,29;UBERON:0003056,8.74e-21,49;UBERON:0000955,2.11e-20,47;UBERON:0006238,2.11e-20,47;UBERON:0003080,3.19e-20,40;UBERON:0004121,9.42e-20,95;UBERON:0000924,9.42e-20,95;UBERON:0006601,9.42e-20,95;UBERON:0002616,1.66e-19,46;UBERON:0002780,2.33e-19,39;UBERON:0001890,2.33e-19,39;UBERON:0006240,2.33e-19,39;UBERON:0010371,7.52e-19,73;UBERON:0000956,4.46e-16,21;UBERON:0001869,4.46e-16,21;UBERON:0000203,4.46e-16,21;UBERON:0002619,7.77e-13,17;UBERON:0002021,1.66e-11,10;UBERON:0000411,1.66e-11,10;UBERON:0001950,1.66e-11,10;UBERON:0010314,1.87e-11,92
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,4.45096213891115,5.81890077199236,7.60597684207415,0,0,0,0,0,0,0.768436610643109,9.12468588314603,5.67024940993101,8.83364837675805,3.99911378165325,6.84692476950002,8.94182834269164,4.12135525378416,8.27296907949019,13.2139057199266,20.8130361078856,15.9750794586493,4.61602007055678,3.01909223887952,2.08365348222704,1.67509799400829,10.1297269805702,10.5430790965999,12.0797720044204,14.2371680799103,11.3703661953433,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,1.40444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,13.3313669070292,26.5350349634803,8.54449594367478,41.3701882057618,40.9144731728529,15.1685272528479,21.9025705141473,0.712875546952214,0,0,0.631325567659422,1.30120442962704,1.37941262660084,1.0803727788321,1.80845781402858,1.36072998302656,1.2811372028485,0.937017245597288,1.81092359517311,0,0.945530400839096,0.703804496655795,1.31517439456545,1.66828349535359,1.74126083261083,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0,54.465096678109,11.5253165864799,0.330418782983798,0,1.49301775374664,2.78684006232526,1.41754207454303,1.00841762311671,1.11189021922435,0.760902504450237,0,0.494096864172033,0.754005626400808,0.795825888164603,0.38992817423824,0,0.432276099749388,0,0,0.228497025219458,1.1270773567308,0,0,0.210407459670956,0,0,0,0,0.296452627087149,0.333690211432188,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0,0,0.335012514883631,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,5.13761887960934,4.92289083687253,0,0,0.94652465824877,0.390438744296638,0.646270193198397,0.477937595905104,0.668396022247182,0.566153061577665,1.61924280669958,1.16902343164525,3.16230222357219,40.1651645527259,0,0.35613120733451,0.81443479676788,0.824850614862677,3.98235415019888,0.485561272309963,1.51161778482376,2.45186603682668,0.885905678642318,2.15204603560749,2.58428293168221,0.727067458955011,1.78248689192361,5.05658812697306,1.05418608574999,3.09406629744561,2.38307724027652,0.36012218806262,0.388076051348264,0.214337035031592,1.41872186913819,0.178368817602071,1.15184314421485,0.608929898229199,0.23467170806371,0.21183207086382,0,0.32977250588296,0.161464426695906,0.241251699712623,0.119372344003136,0,0.291480836629851,9.45669040253599,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0,0.790839983952838,1.82987520414164,0.540026704109006,0.418176592028937,0.436725127492355,0.269728692769641,0.330613822901344,0.523511883968059,0.388844919875379,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0.167884616364078,4.44336066274038,0.563047426353546,0.36630324853453,0.428736758158132,0.501572104035363,60.9931990026432,75.9536640236842,67.6016705858488,54.3056056206053,68.5082519770642,56.6545423042275,74.2524750254986,61.6940048417182,65.2525068937255,61.6134770984666,0.103787347584177,1.19707462020309,1.36586884603307,2.67417388775123,1.04806581313991,0.919217542250071,3.55594764482584,0.412070114477788,3.20919209591815,4.54854981174835,2.5347929989024,3.01802146217722,2.1537546718073,3.45735822986294,2.64203157195821,1.90517476513229,2.54945517078682,2.31491064556446,1.64834360321323,2.64958056241915,2.05721551431249,1.4198064492747,2.62279808942053,2.0348498328526,2.25862512996793,2.19997980518359,3.29270351170991,2.89376682581627,2.30866993537965,3.36685362994643,2.60997039873183,2.75812550651578,1.63692417267876,2.78886314134739,2.12197272079256,3.99696924700713,2.57324769289949,1.07435527024149,0.765153328275374,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0,0,5.6128571499706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,4.45096213891115,5.81890077199236,7.60597684207415,0,0,0,0,0,0,0.768436610643109,9.12468588314603,5.67024940993101,8.83364837675805,3.99911378165325,6.84692476950002,8.94182834269164,4.12135525378416,8.27296907949019,13.2139057199266,20.8130361078856,15.9750794586493,4.61602007055678,3.01909223887952,2.08365348222704,1.67509799400829,10.1297269805702,10.5430790965999,12.0797720044204,14.2371680799103,11.3703661953433,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,1.40444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,13.3313669070292,26.5350349634803,8.54449594367478,41.3701882057618,40.9144731728529,15.1685272528479,21.9025705141473,0.712875546952214,0,0,0.631325567659422,1.30120442962704,1.37941262660084,1.0803727788321,1.80845781402858,1.36072998302656,1.2811372028485,0.937017245597288,1.81092359517311,0,0.945530400839096,0.703804496655795,1.31517439456545,1.66828349535359,1.74126083261083,0.61734640922383,0.398068533636986,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0,54.465096678109,11.5253165864799,0.330418782983798,0,1.49301775374664,2.78684006232526,1.41754207454303,1.00841762311671,1.11189021922435,0.760902504450237,0,0.494096864172033,0.754005626400808,0.795825888164603,0.38992817423824,0,0.432276099749388,0,0,0.228497025219458,1.1270773567308,0,0,0.210407459670956,0,0,0,0,0.296452627087149,0.333690211432188,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0,0,0.335012514883631,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,5.13761887960934,4.92289083687253,0,0,0.94652465824877,0.390438744296638,0.646270193198397,0.477937595905104,0.668396022247182,0.566153061577665,1.61924280669958,1.16902343164525,3.16230222357219,40.1651645527259,0,0.35613120733451,0.81443479676788,0.824850614862677,3.98235415019888,0.485561272309963,1.51161778482376,2.45186603682668,0.885905678642318,2.15204603560749,2.58428293168221,0.727067458955011,1.78248689192361,5.05658812697306,1.05418608574999,3.09406629744561,2.38307724027652,0.36012218806262,0.388076051348264,0.214337035031592,1.41872186913819,0.178368817602071,1.15184314421485,0.608929898229199,0.23467170806371,0.21183207086382,0,0.32977250588296,0.161464426695906,0.241251699712623,0.119372344003136,0,0.291480836629851,9.45669040253599,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0,0.790839983952838,1.82987520414164,0.540026704109006,0.418176592028937,0.436725127492355,0.269728692769641,0.330613822901344,0.523511883968059,0.388844919875379,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0.167884616364078,4.44336066274038,0.563047426353546,0.36630324853453,0.428736758158132,0.501572104035363,60.9931990026432,75.9536640236842,67.6016705858488,54.3056056206053,68.5082519770642,56.6545423042275,74.2524750254986,61.6940048417182,65.2525068937255,61.6134770984666,0.103787347584177,1.19707462020309,1.36586884603307,2.67417388775123,1.04806581313991,0.919217542250071,3.55594764482584,0.412070114477788,3.20919209591815,4.54854981174835,2.5347929989024,3.01802146217722,2.1537546718073,3.45735822986294,2.64203157195821,1.90517476513229,2.54945517078682,2.31491064556446,1.64834360321323,2.64958056241915,2.05721551431249,1.4198064492747,2.62279808942053,2.0348498328526,2.25862512996793,2.19997980518359,3.29270351170991,2.89376682581627,2.30866993537965,3.36685362994643,2.60997039873183,2.75812550651578,1.63692417267876,2.78886314134739,2.12197272079256,3.99696924700713,2.57324769289949,1.07435527024149,0.765153328275374,0,0.231867835620421
|short_description=p2@Lrrc7
|short_description=p2@Lrrc7
}}
}}

Latest revision as of 20:37, 1 October 2015

Short description:p2@Lrrc7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lrrc7_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -2bp_to_ENSMUST00000029826_5end
EntrezGene:Lrrc7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lrrc7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.54
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.33
corpus striatum, adult.CNhs10487.19-21D826.54
corpus striatum, neonate N00.CNhs11226.630-43F18.54
cortex, adult.CNhs10473.12-14D541.37
cortex, neonate N30.CNhs11107.1392-42F240.91
diencephalon, adult.CNhs10482.20-12F215.17
diencephalon, neonate N30.CNhs11201.1388-42B221.90
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E854.47
hippocampus, neonate N00.CNhs11228.627-43G111.53
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I940.17
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C99.46
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A160.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A275.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A367.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D754.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A468.51
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A556.65
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A674.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A761.69
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A865.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A961.61
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.66e-1823
neuroblast (sensu Vertebrata)6.66e-1823
neuron8.28e-1333
neuronal stem cell8.28e-1333
neuroblast8.28e-1333
electrically signaling cell8.28e-1333
electrically responsive cell1.85e-0939
electrically active cell1.85e-0939
ectodermal cell5.02e-0844
neurectodermal cell5.02e-0844
neural cell8.42e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.00e-2654
gray matter1.40e-2534
neural tube2.37e-2452
neural rod2.37e-2452
future spinal cord2.37e-2452
neural keel2.37e-2452
central nervous system5.31e-2473
neurectoderm3.93e-2364
neural plate3.93e-2364
presumptive neural plate3.93e-2364
nervous system7.82e-2375
brain grey matter2.07e-2129
regional part of telencephalon2.07e-2129
telencephalon2.07e-2129
pre-chordal neural plate8.74e-2149
brain2.11e-2047
future brain2.11e-2047
anterior neural tube3.19e-2040
ectoderm-derived structure9.42e-2095
ectoderm9.42e-2095
presumptive ectoderm9.42e-2095
regional part of brain1.66e-1946
regional part of forebrain2.33e-1939
forebrain2.33e-1939
future forebrain2.33e-1939
ecto-epithelium7.52e-1973
cerebral cortex4.46e-1621
cerebral hemisphere4.46e-1621
pallium4.46e-1621
regional part of cerebral cortex7.77e-1317
occipital lobe1.66e-1110
visual cortex1.66e-1110
neocortex1.66e-1110
structure with developmental contribution from neural crest1.87e-1192
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